RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 BOLA2Q9H3K6 86 aa13.59□□□□□ -0.23
C4orf3-201ENST00000399075 CYP27B1O15528 508 aa13.59□□□□□ -0.23
C4orf3-201ENST00000399075 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
C4orf3-201ENST00000399075 TMEM94Q12767 1356 aa13.58□□□□□ -0.23
C4orf3-201ENST00000399075 PTPN12Q05209 780 aaKnown RBP13.58□□□□□ -0.24
C4orf3-201ENST00000399075 FOXD4L6Q3SYB3 417 aaPredicted RBP13.58□□□□□ -0.24
C4orf3-201ENST00000399075 FOXD4L3Q6VB84 417 aaPredicted RBP13.58□□□□□ -0.24
C4orf3-201ENST00000399075 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
C4orf3-201ENST00000399075 ZKSCAN5Q9Y2L8 839 aa13.58□□□□□ -0.24
C4orf3-201ENST00000399075 USP16Q9Y5T5 823 aa13.58□□□□□ -0.24
C4orf3-201ENST00000399075 STRCP1A6NGW2 1772 aa13.58□□□□□ -0.24
C4orf3-201ENST00000399075 TNNI3KQ59H18 835 aa13.58□□□□□ -0.24
C4orf3-201ENST00000399075 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.58□□□□□ -0.24
C4orf3-201ENST00000399075 TPCN1Q9ULQ1 816 aa13.58□□□□□ -0.24
C4orf3-201ENST00000399075 FPGT-TNNI3KV9GXZ4 949 aa13.58□□□□□ -0.24
C4orf3-201ENST00000399075 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 PDCP20941 246 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 RPS6KB1P23443 525 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 BLOC1S2Q6QNY1 142 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 TICAM2Q86XR7 235 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 PLBD2Q8NHP8 589 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
C4orf3-201ENST00000399075 TPM2P07951 284 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 TERF1P54274 439 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 KRT32Q14532 448 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 KLHDC4Q8TBB5 520 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 DBNLQ9UJU6 430 aaKnown RBP13.57□□□□□ -0.24
C4orf3-201ENST00000399075 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
C4orf3-201ENST00000399075 TAF5LO75529 589 aa13.56□□□□□ -0.24
C4orf3-201ENST00000399075 CASP7P55210 303 aa13.56□□□□□ -0.24
C4orf3-201ENST00000399075 RNF214Q8ND24 703 aa13.56□□□□□ -0.24
C4orf3-201ENST00000399075 NUP188Q5SRE5 1749 aa13.56□□□□□ -0.24
C4orf3-201ENST00000399075 CABP4P57796 275 aa13.55□□□□□ -0.24
C4orf3-201ENST00000399075 SPATA31A3Q5VYP0 1347 aa13.55□□□□□ -0.24
C4orf3-201ENST00000399075 UBE3BQ7Z3V4 1068 aa13.55□□□□□ -0.24
C4orf3-201ENST00000399075 ZNF589Q86UQ0 364 aaPredicted RBP13.55□□□□□ -0.24
C4orf3-201ENST00000399075 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
C4orf3-201ENST00000399075 PAPPAQ13219 1627 aa13.55□□□□□ -0.24
C4orf3-201ENST00000399075 ELP1O95163 1332 aa13.55□□□□□ -0.24
C4orf3-201ENST00000399075 FIBPO43427 364 aa13.55□□□□□ -0.24
C4orf3-201ENST00000399075 TFCP2Q12800 502 aa13.55□□□□□ -0.24
C4orf3-201ENST00000399075 HAUS7Q99871 368 aa13.55□□□□□ -0.24
C4orf3-201ENST00000399075 DNM1Q05193 864 aaKnown RBP13.54□□□□□ -0.24
C4orf3-201ENST00000399075 TJP1Q07157 1748 aa13.54□□□□□ -0.24
C4orf3-201ENST00000399075 A0A087WZG4 1122 aa13.54□□□□□ -0.24
C4orf3-201ENST00000399075 TOB2Q14106 344 aaPredicted RBP13.54□□□□□ -0.24
C4orf3-201ENST00000399075 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
C4orf3-201ENST00000399075 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
C4orf3-201ENST00000399075 LARP1BQ659C4 914 aaKnown RBP13.53□□□□□ -0.24
C4orf3-201ENST00000399075 FUCA2Q9BTY2 467 aa13.53□□□□□ -0.24
C4orf3-201ENST00000399075 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
C4orf3-201ENST00000399075 ZHX1Q9UKY1 873 aaPredicted RBP13.53□□□□□ -0.24
C4orf3-201ENST00000399075 ZNF609O15014 1411 aa13.53□□□□□ -0.24
C4orf3-201ENST00000399075 VPS37CA5D8V6 355 aaPredicted RBP13.53□□□□□ -0.24
C4orf3-201ENST00000399075 H7C1W4 665 aa13.53□□□□□ -0.24
C4orf3-201ENST00000399075 PALLDQ8WX93 1383 aa13.53□□□□□ -0.24
C4orf3-201ENST00000399075 KRT85P78386 507 aa13.53□□□□□ -0.24
C4orf3-201ENST00000399075 SH3TC1Q8TE82 1336 aa13.52□□□□□ -0.24
C4orf3-201ENST00000399075 SPEF2Q9C093 1822 aa13.52□□□□□ -0.24
C4orf3-201ENST00000399075 DDX17Q92841 729 aaKnown RBP13.52□□□□□ -0.24
C4orf3-201ENST00000399075 PCDH11XQ9BZA7 1347 aa13.52□□□□□ -0.25
C4orf3-201ENST00000399075 PCDH11YQ9BZA8 1340 aa13.52□□□□□ -0.25
C4orf3-201ENST00000399075 CHRNA2Q15822 529 aa13.52□□□□□ -0.25
C4orf3-201ENST00000399075 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
C4orf3-201ENST00000399075 KCPQ6ZWJ8 1503 aa13.52□□□□□ -0.25
C4orf3-201ENST00000399075 VGLL3A8MV65 326 aa13.51□□□□□ -0.25
C4orf3-201ENST00000399075 FOXO4P98177 505 aa13.51□□□□□ -0.25
C4orf3-201ENST00000399075 MCMDC2Q4G0Z9 681 aa13.51□□□□□ -0.25
C4orf3-201ENST00000399075 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
C4orf3-201ENST00000399075 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
C4orf3-201ENST00000399075 DBNDD2Q9BQY9 259 aa13.51□□□□□ -0.25
C4orf3-201ENST00000399075 TAF6LQ9Y6J9 622 aa13.51□□□□□ -0.25
C4orf3-201ENST00000399075 ATP5J2-PTCD1G3V325 749 aa13.51□□□□□ -0.25
C4orf3-201ENST00000399075 PTCD1O75127 700 aaKnown RBP13.51□□□□□ -0.25
C4orf3-201ENST00000399075 COL9A3Q14050 684 aaPredicted RBP13.51□□□□□ -0.25
C4orf3-201ENST00000399075 KBTBD3Q8NAB2 608 aa13.51□□□□□ -0.25
C4orf3-201ENST00000399075 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 PIP4K2AP48426 406 aaPredicted RBP13.5□□□□□ -0.25
C4orf3-201ENST00000399075 LMBR1LQ6UX01 489 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 NBPF26B4DH59 902 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 NBPF14Q5TI25 921 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 NBPF10Q6P3W6 841 aaKnown RBP13.5□□□□□ -0.25
C4orf3-201ENST00000399075 NBPF15Q8N660 670 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 GTF3C6Q969F1 213 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 SCAND2PQ9GZW5 306 aaPredicted RBP13.5□□□□□ -0.25
C4orf3-201ENST00000399075 CWC25Q9NXE8 425 aaPredicted RBP13.5□□□□□ -0.25
C4orf3-201ENST00000399075 WDR17Q8IZU2 1322 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
C4orf3-201ENST00000399075 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
C4orf3-201ENST00000399075 ATG3Q9NT62 314 aa13.5□□□□□ -0.25
C4orf3-201ENST00000399075 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
C4orf3-201ENST00000399075 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
C4orf3-201ENST00000399075 HCLS1P14317 486 aaPredicted RBP13.49□□□□□ -0.25
C4orf3-201ENST00000399075 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
C4orf3-201ENST00000399075 ATG9AQ7Z3C6 839 aa13.49□□□□□ -0.25
C4orf3-201ENST00000399075 TTC6Q86TZ1 520 aa13.49□□□□□ -0.25
C4orf3-201ENST00000399075 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
C4orf3-201ENST00000399075 IL15P40933 162 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms