RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 TTLL11Q8NHH1 800 aa20.65■□□□□ 0.9
CDH23-204ENST00000398792 LRRCC1Q9C099 1032 aa20.65■□□□□ 0.9
CDH23-204ENST00000398792 MSH5O43196 834 aa20.64■□□□□ 0.9
CDH23-204ENST00000398792 KLHDC4Q8TBB5 520 aa20.64■□□□□ 0.9
CDH23-204ENST00000398792 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.89
CDH23-204ENST00000398792 TM4SF1P30408 202 aa20.64■□□□□ 0.89
CDH23-204ENST00000398792 ZBTB47Q9UFB7 747 aaPredicted RBP20.64■□□□□ 0.89
CDH23-204ENST00000398792 SMARCA5O60264 1052 aaPredicted RBP20.63■□□□□ 0.89
CDH23-204ENST00000398792 OS9Q13438 667 aaPredicted RBP20.63■□□□□ 0.89
CDH23-204ENST00000398792 TPTE2Q6XPS3 522 aa20.63■□□□□ 0.89
CDH23-204ENST00000398792 KIF1BPQ96EK5 621 aa20.63■□□□□ 0.89
CDH23-204ENST00000398792 CCDC85AQ96PX6 553 aaPredicted RBP20.63■□□□□ 0.89
CDH23-204ENST00000398792 GREM2Q9H772 168 aa20.63■□□□□ 0.89
CDH23-204ENST00000398792 RIC1Q4ADV7 1423 aa20.63■□□□□ 0.89
CDH23-204ENST00000398792 NRXN2Q9P2S2 1712 aa20.62■□□□□ 0.89
CDH23-204ENST00000398792 GTF2E1P29083 439 aaPredicted RBP20.62■□□□□ 0.89
CDH23-204ENST00000398792 CCDC57Q2TAC2 916 aa20.62■□□□□ 0.89
CDH23-204ENST00000398792 SLC10A5Q5PT55 438 aa20.62■□□□□ 0.89
CDH23-204ENST00000398792 ERC1Q8IUD2 1116 aa20.62■□□□□ 0.89
CDH23-204ENST00000398792 RHPN1Q8TCX5 695 aa20.62■□□□□ 0.89
CDH23-204ENST00000398792 SIL1Q9H173 461 aa20.62■□□□□ 0.89
CDH23-204ENST00000398792 RTL9Q8NET4 1388 aa20.62■□□□□ 0.89
CDH23-204ENST00000398792 DDR1Q08345 913 aa20.61■□□□□ 0.89
CDH23-204ENST00000398792 NLGN1Q8N2Q7 840 aa20.61■□□□□ 0.89
CDH23-204ENST00000398792 CNBD1Q8NA66 436 aa20.61■□□□□ 0.89
CDH23-204ENST00000398792 ITGA6P23229 1130 aa20.6■□□□□ 0.89
CDH23-204ENST00000398792 G3BP1Q13283 466 aaKnown RBP eCLIP20.6■□□□□ 0.89
CDH23-204ENST00000398792 IFIT5Q13325 482 aaKnown RBP20.6■□□□□ 0.89
CDH23-204ENST00000398792 UPF1Q92900 1129 aaKnown RBP eCLIP20.6■□□□□ 0.89
CDH23-204ENST00000398792 POLRMTO00411 1230 aaKnown RBP20.6■□□□□ 0.89
CDH23-204ENST00000398792 CCDC152Q4G0S7 254 aa20.6■□□□□ 0.89
CDH23-204ENST00000398792 ANKRD18BA2A2Z9 1011 aa20.59■□□□□ 0.89
CDH23-204ENST00000398792 SERPINB2P05120 415 aa20.59■□□□□ 0.89
CDH23-204ENST00000398792 PRR5LQ6MZQ0 368 aa20.59■□□□□ 0.89
CDH23-204ENST00000398792 ZNF594Q96JF6 807 aaPredicted RBP20.59■□□□□ 0.89
CDH23-204ENST00000398792 NPHP1O15259 732 aa20.58■□□□□ 0.89
CDH23-204ENST00000398792 SASH1O94885 1247 aa20.58■□□□□ 0.89
CDH23-204ENST00000398792 C3orf67Q6ZVT6 689 aa20.58■□□□□ 0.89
CDH23-204ENST00000398792 IL1RAPL2Q9NP60 686 aa20.58■□□□□ 0.89
CDH23-204ENST00000398792 CIAO1O76071 339 aa20.57■□□□□ 0.88
CDH23-204ENST00000398792 SF3B3Q15393 1217 aaKnown RBP20.57■□□□□ 0.88
CDH23-204ENST00000398792 TAF7LQ5H9L4 462 aa20.57■□□□□ 0.88
CDH23-204ENST00000398792 FBXO3Q9UK99 471 aa20.57■□□□□ 0.88
CDH23-204ENST00000398792 EYA2O00167 538 aa20.56■□□□□ 0.88
CDH23-204ENST00000398792 ATG9AQ7Z3C6 839 aa20.56■□□□□ 0.88
CDH23-204ENST00000398792 C16orf71Q8IYS4 520 aaPredicted RBP20.56■□□□□ 0.88
CDH23-204ENST00000398792 CCDC24Q8N4L8 307 aa20.56■□□□□ 0.88
CDH23-204ENST00000398792 OTUD7AQ8TE49 926 aaPredicted RBP20.56■□□□□ 0.88
CDH23-204ENST00000398792 BCL11AQ9H165 835 aa20.56■□□□□ 0.88
CDH23-204ENST00000398792 COL4A1P02462 1669 aa20.56■□□□□ 0.88
CDH23-204ENST00000398792 SALL3Q9BXA9 1300 aa20.56■□□□□ 0.88
CDH23-204ENST00000398792 ST5P78524 1137 aa20.56■□□□□ 0.88
CDH23-204ENST00000398792 MSL1Q68DK7 614 aa20.56■□□□□ 0.88
CDH23-204ENST00000398792 SPEF2Q9C093 1822 aa20.56■□□□□ 0.88
CDH23-204ENST00000398792 IL15P40933 162 aaPredicted RBP20.55■□□□□ 0.88
CDH23-204ENST00000398792 LRRC24Q50LG9 513 aa20.55■□□□□ 0.88
CDH23-204ENST00000398792 PLEKHM2Q8IWE5 1019 aa20.55■□□□□ 0.88
CDH23-204ENST00000398792 NLRP3Q96P20 1036 aa20.55■□□□□ 0.88
CDH23-204ENST00000398792 MMP10P09238 476 aa20.54■□□□□ 0.88
CDH23-204ENST00000398792 PUS3Q9BZE2 481 aaKnown RBP20.54■□□□□ 0.88
CDH23-204ENST00000398792 SEC31BQ9NQW1 1179 aa20.54■□□□□ 0.88
CDH23-204ENST00000398792 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.54■□□□□ 0.88
CDH23-204ENST00000398792 ANKRD31Q8N7Z5 1873 aa20.54■□□□□ 0.88
CDH23-204ENST00000398792 CLASRPQ8N2M8 674 aaKnown RBP20.53■□□□□ 0.88
CDH23-204ENST00000398792 TFCP2Q12800 502 aa20.53■□□□□ 0.88
CDH23-204ENST00000398792 LDHAL6AQ6ZMR3 332 aa20.52■□□□□ 0.88
CDH23-204ENST00000398792 CDC5LQ99459 802 aaKnown RBP20.52■□□□□ 0.88
CDH23-204ENST00000398792 PDGFDQ9GZP0 370 aaPredicted RBP20.52■□□□□ 0.88
CDH23-204ENST00000398792 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
CDH23-204ENST00000398792 ZNF609O15014 1411 aa20.51■□□□□ 0.87
CDH23-204ENST00000398792 MX1P20591 662 aa20.51■□□□□ 0.87
CDH23-204ENST00000398792 PDE1AP54750 535 aa20.5■□□□□ 0.87
CDH23-204ENST00000398792 AACSQ86V21 672 aa20.5■□□□□ 0.87
CDH23-204ENST00000398792 OSBPL3Q9H4L5 887 aa20.5■□□□□ 0.87
CDH23-204ENST00000398792 CNNM1Q9NRU3 951 aa20.5■□□□□ 0.87
CDH23-204ENST00000398792 RIPOR2Q9Y4F9 1068 aa20.5■□□□□ 0.87
CDH23-204ENST00000398792 A0A1B0GUL6 1792 aa20.5■□□□□ 0.87
CDH23-204ENST00000398792 IGHMBP2P38935 993 aaKnown RBP20.49■□□□□ 0.87
CDH23-204ENST00000398792 TNNI3KQ59H18 835 aa20.49■□□□□ 0.87
CDH23-204ENST00000398792 SLC16A10Q8TF71 515 aa20.49■□□□□ 0.87
CDH23-204ENST00000398792 EAF2Q96CJ1 260 aaPredicted RBP20.49■□□□□ 0.87
CDH23-204ENST00000398792 FPGT-TNNI3KV9GXZ4 949 aa20.49■□□□□ 0.87
CDH23-204ENST00000398792 TAF1P21675 1872 aa20.49■□□□□ 0.87
CDH23-204ENST00000398792 CRY2Q49AN0 593 aa20.49■□□□□ 0.87
CDH23-204ENST00000398792 GPR108Q9NPR9 543 aa20.49■□□□□ 0.87
CDH23-204ENST00000398792 STAP2Q9UGK3 403 aa20.49■□□□□ 0.87
CDH23-204ENST00000398792 AOX1Q06278 1338 aa20.48■□□□□ 0.87
CDH23-204ENST00000398792 IFIT2P09913 472 aaKnown RBP20.48■□□□□ 0.87
CDH23-204ENST00000398792 ANKRD18AQ8IVF6 992 aa20.48■□□□□ 0.87
CDH23-204ENST00000398792 MPHOSPH8Q99549 860 aa20.48■□□□□ 0.87
CDH23-204ENST00000398792 COL11A2P13942 1736 aaPredicted RBP20.48■□□□□ 0.87
CDH23-204ENST00000398792 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
CDH23-204ENST00000398792 METTL24Q5JXM2 366 aa20.47■□□□□ 0.87
CDH23-204ENST00000398792 TTC22Q5TAA0 569 aa20.47■□□□□ 0.87
CDH23-204ENST00000398792 DDX46Q7L014 1031 aaKnown RBP20.47■□□□□ 0.87
CDH23-204ENST00000398792 CEP126Q9P2H0 1117 aa20.47■□□□□ 0.87
CDH23-204ENST00000398792 MROH5Q6ZUA9 1318 aa20.47■□□□□ 0.87
CDH23-204ENST00000398792 KLRG2A4D1S0 409 aaPredicted RBP20.46■□□□□ 0.87
CDH23-204ENST00000398792 GSPT1P15170 499 aaKnown RBP20.46■□□□□ 0.87
CDH23-204ENST00000398792 TSHZ3Q63HK5 1081 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms