RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SH3TC1Q8TE82 1336 aa15.76■□□□□ 0.11
TFF3-202ENST00000398431 GMPSP49915 693 aaPredicted RBP15.76■□□□□ 0.11
TFF3-202ENST00000398431 HIRAP54198 1017 aaPredicted RBP15.76■□□□□ 0.11
TFF3-202ENST00000398431 GRAPQ13588 217 aa15.76■□□□□ 0.11
TFF3-202ENST00000398431 DPP8Q6V1X1 898 aaPredicted RBP15.76■□□□□ 0.11
TFF3-202ENST00000398431 GRAPLQ8TC17 118 aaPredicted RBP15.76■□□□□ 0.11
TFF3-202ENST00000398431 TMX4Q9H1E5 349 aaPredicted RBP15.76■□□□□ 0.11
TFF3-202ENST00000398431 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
TFF3-202ENST00000398431 YDJCA8MPS7 323 aa15.75■□□□□ 0.11
TFF3-202ENST00000398431 MAP2K1Q02750 393 aaPredicted RBP15.75■□□□□ 0.11
TFF3-202ENST00000398431 CIAPIN1Q6FI81 312 aa15.75■□□□□ 0.11
TFF3-202ENST00000398431 CYP4F22Q6NT55 531 aa15.75■□□□□ 0.11
TFF3-202ENST00000398431 DDX46Q7L014 1031 aaKnown RBP15.75■□□□□ 0.11
TFF3-202ENST00000398431 CAPNS2Q96L46 248 aa15.75■□□□□ 0.11
TFF3-202ENST00000398431 ISCA1Q9BUE6 129 aa15.75■□□□□ 0.11
TFF3-202ENST00000398431 CHPF2Q9P2E5 772 aa15.75■□□□□ 0.11
TFF3-202ENST00000398431 TLL2Q9Y6L7 1015 aa15.75■□□□□ 0.11
TFF3-202ENST00000398431 SHTN1A0MZ66 631 aa15.74■□□□□ 0.11
TFF3-202ENST00000398431 RAD17O75943 681 aa15.74■□□□□ 0.11
TFF3-202ENST00000398431 DDX10Q13206 875 aaKnown RBP15.74■□□□□ 0.11
TFF3-202ENST00000398431 ANKRD13DQ6ZTN6 518 aa15.74■□□□□ 0.11
TFF3-202ENST00000398431 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
TFF3-202ENST00000398431 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
TFF3-202ENST00000398431 ADAMTS8Q9UP79 889 aa15.74■□□□□ 0.11
TFF3-202ENST00000398431 LAS1LQ9Y4W2 734 aaKnown RBP15.74■□□□□ 0.11
TFF3-202ENST00000398431 SF3B3Q15393 1217 aaKnown RBP15.73■□□□□ 0.11
TFF3-202ENST00000398431 GPR101Q96P66 508 aaPredicted RBP15.73■□□□□ 0.11
TFF3-202ENST00000398431 GLIS2Q9BZE0 524 aaPredicted RBP15.73■□□□□ 0.11
TFF3-202ENST00000398431 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
TFF3-202ENST00000398431 DUOX1Q9NRD9 1551 aa15.72■□□□□ 0.11
TFF3-202ENST00000398431 ATP5J2-PTCD1G3V325 749 aa15.72■□□□□ 0.11
TFF3-202ENST00000398431 ZEB1P37275 1124 aaPredicted RBP15.72■□□□□ 0.11
TFF3-202ENST00000398431 ECE1P42892 770 aa15.72■□□□□ 0.11
TFF3-202ENST00000398431 HDGFL1Q5TGJ6 251 aa15.72■□□□□ 0.11
TFF3-202ENST00000398431 CELF1Q92879 486 aaKnown RBP15.72■□□□□ 0.11
TFF3-202ENST00000398431 FAM89AQ96GI7 184 aa15.72■□□□□ 0.11
TFF3-202ENST00000398431 CNOT7Q9UIV1 285 aaKnown RBP15.72■□□□□ 0.11
TFF3-202ENST00000398431 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.11
TFF3-202ENST00000398431 COL4A1P02462 1669 aa15.71■□□□□ 0.11
TFF3-202ENST00000398431 HOXB7P09629 217 aa15.71■□□□□ 0.11
TFF3-202ENST00000398431 TNIP1Q15025 636 aa15.71■□□□□ 0.11
TFF3-202ENST00000398431 TMC4Q7Z404 712 aa15.71■□□□□ 0.11
TFF3-202ENST00000398431 SAPCD2Q86UD0 394 aa15.71■□□□□ 0.11
TFF3-202ENST00000398431 TRPM4Q8TD43 1214 aa15.71■□□□□ 0.11
TFF3-202ENST00000398431 ZC3H15Q8WU90 426 aaKnown RBP15.71■□□□□ 0.11
TFF3-202ENST00000398431 DBF4Q9UBU7 674 aaPredicted RBP15.71■□□□□ 0.11
TFF3-202ENST00000398431 THSD7BQ9C0I4 1608 aa15.71■□□□□ 0.11
TFF3-202ENST00000398431 AOC2O75106 756 aa15.7■□□□□ 0.1
TFF3-202ENST00000398431 CELF2O95319 508 aaKnown RBP15.7■□□□□ 0.1
TFF3-202ENST00000398431 TRIM28Q13263 835 aaKnown RBP15.7■□□□□ 0.1
TFF3-202ENST00000398431 DUSP27Q5VZP5 1158 aa15.7■□□□□ 0.1
TFF3-202ENST00000398431 CFAP44Q96MT7 982 aa15.7■□□□□ 0.1
TFF3-202ENST00000398431 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
TFF3-202ENST00000398431 POLLQ9UGP5 575 aa15.7■□□□□ 0.1
TFF3-202ENST00000398431 ZBTB12Q9Y330 459 aaPredicted RBP15.7■□□□□ 0.1
TFF3-202ENST00000398431 CDHR2Q9BYE9 1310 aa15.69■□□□□ 0.1
TFF3-202ENST00000398431 ZNF853P0CG23 659 aa15.69■□□□□ 0.1
TFF3-202ENST00000398431 MAP2K2P36507 400 aa15.69■□□□□ 0.1
TFF3-202ENST00000398431 GRM1Q13255 1194 aa15.69■□□□□ 0.1
TFF3-202ENST00000398431 DLK2Q6UY11 383 aa15.69■□□□□ 0.1
TFF3-202ENST00000398431 PAXIP1Q6ZW49 1069 aaPredicted RBP15.69■□□□□ 0.1
TFF3-202ENST00000398431 ABHD8Q96I13 439 aa15.69■□□□□ 0.1
TFF3-202ENST00000398431 KCNQ5Q9NR82 932 aa15.69■□□□□ 0.1
TFF3-202ENST00000398431 NSFL1CQ9UNZ2 370 aaKnown RBP15.69■□□□□ 0.1
TFF3-202ENST00000398431 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
TFF3-202ENST00000398431 PSMD14O00487 310 aa15.68■□□□□ 0.1
TFF3-202ENST00000398431 GPSM2P81274 684 aa15.68■□□□□ 0.1
TFF3-202ENST00000398431 WASHC4Q2M389 1173 aa15.68■□□□□ 0.1
TFF3-202ENST00000398431 RTL5Q5HYW3 569 aaPredicted RBP15.68■□□□□ 0.1
TFF3-202ENST00000398431 CDC37L1Q7L3B6 337 aa15.68■□□□□ 0.1
TFF3-202ENST00000398431 DPF2Q92785 391 aa15.68■□□□□ 0.1
TFF3-202ENST00000398431 HHIPL1Q96JK4 782 aa15.68■□□□□ 0.1
TFF3-202ENST00000398431 MBIPQ9NS73 344 aa15.68■□□□□ 0.1
TFF3-202ENST00000398431 HYPKQ9NX55 129 aa15.68■□□□□ 0.1
TFF3-202ENST00000398431 H7C1D1 291 aa15.67■□□□□ 0.1
TFF3-202ENST00000398431 RIMBP2O15034 1052 aa15.67■□□□□ 0.1
TFF3-202ENST00000398431 EGFRP00533 1210 aa15.67■□□□□ 0.1
TFF3-202ENST00000398431 SAMD7Q7Z3H4 446 aa15.67■□□□□ 0.1
TFF3-202ENST00000398431 MICALL2Q8IY33 904 aa15.67■□□□□ 0.1
TFF3-202ENST00000398431 DBNDD1Q9H9R9 158 aa15.67■□□□□ 0.1
TFF3-202ENST00000398431 POLR2AP24928 1970 aaKnown RBP15.67■□□□□ 0.1
TFF3-202ENST00000398431 IRS4O14654 1257 aaPredicted RBP15.66■□□□□ 0.1
TFF3-202ENST00000398431 RPS8P62241 208 aaKnown RBP15.66■□□□□ 0.1
TFF3-202ENST00000398431 WDR43Q15061 677 aaKnown RBP eCLIP15.66■□□□□ 0.1
TFF3-202ENST00000398431 USP48Q86UV5 1035 aa15.66■□□□□ 0.1
TFF3-202ENST00000398431 ZIC5Q96T25 663 aa15.66■□□□□ 0.1
TFF3-202ENST00000398431 PHAXQ9H814 394 aaKnown RBP15.66■□□□□ 0.1
TFF3-202ENST00000398431 TSKSQ9UJT2 592 aa15.66■□□□□ 0.1
TFF3-202ENST00000398431 RTL9Q8NET4 1388 aa15.65■□□□□ 0.1
TFF3-202ENST00000398431 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
TFF3-202ENST00000398431 DOK7Q18PE1 504 aa15.65■□□□□ 0.1
TFF3-202ENST00000398431 TBC1D16Q8TBP0 767 aa15.65■□□□□ 0.1
TFF3-202ENST00000398431 SEC31BQ9NQW1 1179 aa15.65■□□□□ 0.1
TFF3-202ENST00000398431 RIC3Q7Z5B4 369 aa15.64■□□□□ 0.09
TFF3-202ENST00000398431 ZBTB38Q8NAP3 1195 aaPredicted RBP15.64■□□□□ 0.09
TFF3-202ENST00000398431 BEGAINQ9BUH8 593 aa15.64■□□□□ 0.09
TFF3-202ENST00000398431 ZNF408Q9H9D4 720 aa15.64■□□□□ 0.09
TFF3-202ENST00000398431 ELL2O00472 640 aaPredicted RBP15.63■□□□□ 0.09
TFF3-202ENST00000398431 APAF1O14727 1248 aa15.63■□□□□ 0.09
TFF3-202ENST00000398431 ECE2O60344 883 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms