RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 FTSJ3Q8IY81 847 aaKnown RBP32.01■■■□□ 2.71
TMEM55B-202ENST00000398020 RLBP1P12271 317 aa32■■■□□ 2.71
TMEM55B-202ENST00000398020 ALDH1B1P30837 517 aa32■■■□□ 2.71
TMEM55B-202ENST00000398020 CTSWP56202 376 aa32■■■□□ 2.71
TMEM55B-202ENST00000398020 TMEM57Q8N5G2 664 aa32■■■□□ 2.71
TMEM55B-202ENST00000398020 MYH3P11055 1940 aa32■■■□□ 2.71
TMEM55B-202ENST00000398020 DDX46Q7L014 1031 aaKnown RBP31.99■■■□□ 2.71
TMEM55B-202ENST00000398020 DZIP1LQ8IYY4 767 aaKnown RBP31.99■■■□□ 2.71
TMEM55B-202ENST00000398020 ARFGEF1Q9Y6D6 1849 aa31.99■■■□□ 2.71
TMEM55B-202ENST00000398020 CRAMP1Q96RY5 1269 aa31.99■■■□□ 2.71
TMEM55B-202ENST00000398020 UTYO14607 1347 aa31.98■■■□□ 2.71
TMEM55B-202ENST00000398020 C21orf2O43822 256 aa31.98■■■□□ 2.71
TMEM55B-202ENST00000398020 TTLL11Q8NHH1 800 aa31.98■■■□□ 2.71
TMEM55B-202ENST00000398020 SUCLG2Q96I99 432 aa31.98■■■□□ 2.71
TMEM55B-202ENST00000398020 PLA2G12BQ9BX93 195 aa31.98■■■□□ 2.71
TMEM55B-202ENST00000398020 CCDC152Q4G0S7 254 aa31.97■■■□□ 2.71
TMEM55B-202ENST00000398020 EPHA10Q5JZY3 1008 aa31.97■■■□□ 2.71
TMEM55B-202ENST00000398020 SLC51AQ86UW1 340 aa31.97■■■□□ 2.71
TMEM55B-202ENST00000398020 COL4A1P02462 1669 aa31.97■■■□□ 2.71
TMEM55B-202ENST00000398020 PANK1Q8TE04 598 aa31.96■■■□□ 2.71
TMEM55B-202ENST00000398020 SEC31BQ9NQW1 1179 aa31.96■■■□□ 2.71
TMEM55B-202ENST00000398020 FOXO4P98177 505 aa31.95■■■□□ 2.71
TMEM55B-202ENST00000398020 OLFM4Q6UX06 510 aa31.95■■■□□ 2.71
TMEM55B-202ENST00000398020 KAZALD1Q96I82 304 aa31.95■■■□□ 2.7
TMEM55B-202ENST00000398020 MEIS3Q99687 375 aa31.95■■■□□ 2.7
TMEM55B-202ENST00000398020 GREM2Q9H772 168 aa31.95■■■□□ 2.7
TMEM55B-202ENST00000398020 CELF1Q92879 486 aaKnown RBP31.94■■■□□ 2.7
TMEM55B-202ENST00000398020 GRIN3BO60391 1043 aa31.93■■■□□ 2.7
TMEM55B-202ENST00000398020 GRAPQ13588 217 aa31.93■■■□□ 2.7
TMEM55B-202ENST00000398020 GRAPLQ8TC17 118 aaPredicted RBP31.93■■■□□ 2.7
TMEM55B-202ENST00000398020 PPEF1O14829 653 aaPredicted RBP31.92■■■□□ 2.7
TMEM55B-202ENST00000398020 UBTFL1P0CB47 393 aaPredicted RBP31.92■■■□□ 2.7
TMEM55B-202ENST00000398020 FAM161AQ3B820 660 aa31.92■■■□□ 2.7
TMEM55B-202ENST00000398020 LMBR1LQ6UX01 489 aa31.92■■■□□ 2.7
TMEM55B-202ENST00000398020 ARHGAP27Q6ZUM4 889 aa31.92■■■□□ 2.7
TMEM55B-202ENST00000398020 ITPRIPQ8IWB1 547 aa31.92■■■□□ 2.7
TMEM55B-202ENST00000398020 C7orf43Q8WVR3 580 aa31.92■■■□□ 2.7
TMEM55B-202ENST00000398020 CHMP3Q9Y3E7 222 aa31.92■■■□□ 2.7
TMEM55B-202ENST00000398020 CSF1RP07333 972 aa31.91■■■□□ 2.7
TMEM55B-202ENST00000398020 BICC1Q9H694 974 aaKnown RBP31.91■■■□□ 2.7
TMEM55B-202ENST00000398020 C20orf194Q5TEA3 1177 aa31.89■■■□□ 2.7
TMEM55B-202ENST00000398020 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.89■■■□□ 2.7
TMEM55B-202ENST00000398020 BBOX1O75936 387 aa31.88■■■□□ 2.69
TMEM55B-202ENST00000398020 ITGA6P23229 1130 aa31.87■■■□□ 2.69
TMEM55B-202ENST00000398020 MS4A1P11836 297 aa31.86■■■□□ 2.69
TMEM55B-202ENST00000398020 RPS8P62241 208 aaKnown RBP31.86■■■□□ 2.69
TMEM55B-202ENST00000398020 RTL9Q8NET4 1388 aa31.86■■■□□ 2.69
TMEM55B-202ENST00000398020 ANKRD44Q8N8A2 993 aa31.86■■■□□ 2.69
TMEM55B-202ENST00000398020 LRRFIP2Q9Y608 721 aaKnown RBP31.86■■■□□ 2.69
TMEM55B-202ENST00000398020 GNAI3P08754 354 aa31.85■■■□□ 2.69
TMEM55B-202ENST00000398020 COG6Q9Y2V7 657 aa31.85■■■□□ 2.69
TMEM55B-202ENST00000398020 ATP6V0A2Q9Y487 856 aa31.85■■■□□ 2.69
TMEM55B-202ENST00000398020 RASSF7Q02833 373 aa31.84■■■□□ 2.69
TMEM55B-202ENST00000398020 CCDC93Q567U6 631 aa31.84■■■□□ 2.69
TMEM55B-202ENST00000398020 ANKRD18AQ8IVF6 992 aa31.84■■■□□ 2.69
TMEM55B-202ENST00000398020 SPEF2Q9C093 1822 aa31.84■■■□□ 2.69
TMEM55B-202ENST00000398020 RRP1P56182 461 aaKnown RBP31.83■■■□□ 2.69
TMEM55B-202ENST00000398020 CDC5LQ99459 802 aaKnown RBP31.83■■■□□ 2.69
TMEM55B-202ENST00000398020 NFKBIEO00221 500 aa31.83■■■□□ 2.69
TMEM55B-202ENST00000398020 IFIT5Q13325 482 aaKnown RBP31.83■■■□□ 2.69
TMEM55B-202ENST00000398020 RABL6Q3YEC7 729 aaPredicted RBP31.83■■■□□ 2.69
TMEM55B-202ENST00000398020 SOGA3Q5TF21 947 aa31.83■■■□□ 2.69
TMEM55B-202ENST00000398020 ANKRD18BA2A2Z9 1011 aa31.82■■■□□ 2.68
TMEM55B-202ENST00000398020 FER1L6Q2WGJ9 1857 aa31.81■■■□□ 2.68
TMEM55B-202ENST00000398020 CCDC57Q2TAC2 916 aa31.81■■■□□ 2.68
TMEM55B-202ENST00000398020 SP8Q8IXZ3 490 aa31.81■■■□□ 2.68
TMEM55B-202ENST00000398020 ZBTB7BO15156 539 aaPredicted RBP31.8■■■□□ 2.68
TMEM55B-202ENST00000398020 MVPQ14764 893 aaKnown RBP31.8■■■□□ 2.68
TMEM55B-202ENST00000398020 TMX4Q9H1E5 349 aaPredicted RBP31.8■■■□□ 2.68
TMEM55B-202ENST00000398020 PDE3AQ14432 1141 aa31.8■■■□□ 2.68
TMEM55B-202ENST00000398020 ZNF594Q96JF6 807 aaPredicted RBP31.8■■■□□ 2.68
TMEM55B-202ENST00000398020 TMC4Q7Z404 712 aa31.79■■■□□ 2.68
TMEM55B-202ENST00000398020 SNED1Q8TER0 1413 aa31.79■■■□□ 2.68
TMEM55B-202ENST00000398020 LRRC37AA6NMS7 1700 aa31.78■■■□□ 2.68
TMEM55B-202ENST00000398020 IGHMBP2P38935 993 aaKnown RBP31.78■■■□□ 2.68
TMEM55B-202ENST00000398020 RTKN2Q8IZC4 609 aa31.78■■■□□ 2.68
TMEM55B-202ENST00000398020 C1orf115Q9H7X2 142 aa31.78■■■□□ 2.68
TMEM55B-202ENST00000398020 HDAC5Q9UQL6 1122 aa31.78■■■□□ 2.68
TMEM55B-202ENST00000398020 GNAI2P04899 355 aa31.77■■■□□ 2.68
TMEM55B-202ENST00000398020 CC2D2BQ6DHV5 1058 aa31.77■■■□□ 2.68
TMEM55B-202ENST00000398020 TAOK3Q9H2K8 898 aa31.77■■■□□ 2.68
TMEM55B-202ENST00000398020 TAF7LQ5H9L4 462 aa31.76■■■□□ 2.68
TMEM55B-202ENST00000398020 PRELPP51888 382 aa31.76■■■□□ 2.67
TMEM55B-202ENST00000398020 MPHOSPH8Q99549 860 aa31.76■■■□□ 2.67
TMEM55B-202ENST00000398020 BSDC1Q9NW68 430 aaPredicted RBP31.75■■■□□ 2.67
TMEM55B-202ENST00000398020 FKBP4Q02790 459 aaKnown RBP eCLIP31.74■■■□□ 2.67
TMEM55B-202ENST00000398020 KLHDC4Q8TBB5 520 aa31.74■■■□□ 2.67
TMEM55B-202ENST00000398020 DDX19BQ9UMR2 479 aa31.74■■■□□ 2.67
TMEM55B-202ENST00000398020 NSFL1CQ9UNZ2 370 aaKnown RBP31.74■■■□□ 2.67
TMEM55B-202ENST00000398020 GPSM2P81274 684 aa31.73■■■□□ 2.67
TMEM55B-202ENST00000398020 DPP8Q6V1X1 898 aaPredicted RBP31.73■■■□□ 2.67
TMEM55B-202ENST00000398020 MPNDQ8N594 471 aa31.73■■■□□ 2.67
TMEM55B-202ENST00000398020 SUPT16HQ9Y5B9 1047 aaKnown RBP31.73■■■□□ 2.67
TMEM55B-202ENST00000398020 CHD4Q14839 1912 aa31.73■■■□□ 2.67
TMEM55B-202ENST00000398020 ZNF277Q9NRM2 450 aaPredicted RBP31.73■■■□□ 2.67
TMEM55B-202ENST00000398020 SBF1O95248 1867 aa31.72■■■□□ 2.67
TMEM55B-202ENST00000398020 MINPP1Q9UNW1 487 aa31.72■■■□□ 2.67
TMEM55B-202ENST00000398020 CCDC88AQ3V6T2 1871 aa31.71■■■□□ 2.67
TMEM55B-202ENST00000398020 LTBP3Q9NS15 1303 aa31.71■■■□□ 2.67
TMEM55B-202ENST00000398020 C9orf131Q5VYM1 1079 aa31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms