RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 NRXN2Q9P2S2 1712 aa24.06■■□□□ 1.44
PDLIM2-205ENST00000397761 SPEF2Q9C093 1822 aa24.06■■□□□ 1.44
PDLIM2-205ENST00000397761 SASH1O94885 1247 aa24.06■■□□□ 1.44
PDLIM2-205ENST00000397761 FAM161AQ3B820 660 aa24.06■■□□□ 1.44
PDLIM2-205ENST00000397761 C16orf71Q8IYS4 520 aaPredicted RBP24.06■■□□□ 1.44
PDLIM2-205ENST00000397761 TFCP2L1Q9NZI6 479 aa24.06■■□□□ 1.44
PDLIM2-205ENST00000397761 FBXO3Q9UK99 471 aa24.06■■□□□ 1.44
PDLIM2-205ENST00000397761 OSBPL3Q9H4L5 887 aa24.05■■□□□ 1.44
PDLIM2-205ENST00000397761 CHMP3Q9Y3E7 222 aa24.05■■□□□ 1.44
PDLIM2-205ENST00000397761 CIAO1O76071 339 aa24.04■■□□□ 1.44
PDLIM2-205ENST00000397761 OS9Q13438 667 aaPredicted RBP24.04■■□□□ 1.44
PDLIM2-205ENST00000397761 NFIXQ14938 502 aa24.04■■□□□ 1.44
PDLIM2-205ENST00000397761 BICDL1Q6ZP65 573 aa24.04■■□□□ 1.44
PDLIM2-205ENST00000397761 NUTM1Q86Y26 1132 aa24.04■■□□□ 1.44
PDLIM2-205ENST00000397761 OTUD7AQ8TE49 926 aaPredicted RBP24.04■■□□□ 1.44
PDLIM2-205ENST00000397761 RIC1Q4ADV7 1423 aa24.04■■□□□ 1.44
PDLIM2-205ENST00000397761 FAM177BA6PVY3 158 aa24.03■■□□□ 1.44
PDLIM2-205ENST00000397761 HCLS1P14317 486 aaPredicted RBP24.03■■□□□ 1.44
PDLIM2-205ENST00000397761 CCDC57Q2TAC2 916 aa24.03■■□□□ 1.44
PDLIM2-205ENST00000397761 TNRC6CQ9HCJ0 1690 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-205ENST00000397761 AK9Q5TCS8 1911 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 ABCC12Q96J65 1359 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 PNPLA7Q6ZV29 1317 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 TM4SF1P30408 202 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 IFIT5Q13325 482 aaKnown RBP24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 ERFEQ4G0M1 354 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 ATG9AQ7Z3C6 839 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 COL23A1Q86Y22 540 aaPredicted RBP24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 SIL1Q9H173 461 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 GREM2Q9H772 168 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 IL1RAPL2Q9NP60 686 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 STAP2Q9UGK3 403 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 TAF1P21675 1872 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 A0A1B0GUL6 1792 aa24.02■■□□□ 1.44
PDLIM2-205ENST00000397761 EYA2O00167 538 aa24.01■■□□□ 1.43
PDLIM2-205ENST00000397761 BMP2KLQ5H9B9 411 aa24.01■■□□□ 1.43
PDLIM2-205ENST00000397761 TPTE2Q6XPS3 522 aa24.01■■□□□ 1.43
PDLIM2-205ENST00000397761 NBPF5PQ86XG9 351 aaPredicted RBP24.01■■□□□ 1.43
PDLIM2-205ENST00000397761 AOX1Q06278 1338 aa24■■□□□ 1.43
PDLIM2-205ENST00000397761 ITGA6P23229 1130 aa24■■□□□ 1.43
PDLIM2-205ENST00000397761 IL15P40933 162 aaPredicted RBP24■■□□□ 1.43
PDLIM2-205ENST00000397761 PDE1AP54750 535 aa24■■□□□ 1.43
PDLIM2-205ENST00000397761 SF3B3Q15393 1217 aaKnown RBP24■■□□□ 1.43
PDLIM2-205ENST00000397761 SLC15A2Q16348 729 aa24■■□□□ 1.43
PDLIM2-205ENST00000397761 CLASRPQ8N2M8 674 aaKnown RBP24■■□□□ 1.43
PDLIM2-205ENST00000397761 ANO8Q9HCE9 1232 aaPredicted RBP24■■□□□ 1.43
PDLIM2-205ENST00000397761 ANKRD18BA2A2Z9 1011 aa23.99■■□□□ 1.43
PDLIM2-205ENST00000397761 MX1P20591 662 aa23.99■■□□□ 1.43
PDLIM2-205ENST00000397761 ZNF594Q96JF6 807 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-205ENST00000397761 BACH2Q9BYV9 841 aa23.99■■□□□ 1.43
PDLIM2-205ENST00000397761 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-205ENST00000397761 SRCAPQ6ZRS2 3230 aa23.98■■□□□ 1.43
PDLIM2-205ENST00000397761 C8orf34Q49A92 452 aa23.98■■□□□ 1.43
PDLIM2-205ENST00000397761 CCDC152Q4G0S7 254 aa23.98■■□□□ 1.43
PDLIM2-205ENST00000397761 TTC22Q5TAA0 569 aa23.98■■□□□ 1.43
PDLIM2-205ENST00000397761 ANKRD31Q8N7Z5 1873 aa23.98■■□□□ 1.43
PDLIM2-205ENST00000397761 CCDC85AQ96PX6 553 aaPredicted RBP23.97■■□□□ 1.43
PDLIM2-205ENST00000397761 GPR108Q9NPR9 543 aa23.97■■□□□ 1.43
PDLIM2-205ENST00000397761 COL4A1P02462 1669 aa23.96■■□□□ 1.43
PDLIM2-205ENST00000397761 LRRC24Q50LG9 513 aa23.96■■□□□ 1.43
PDLIM2-205ENST00000397761 NLGN1Q8N2Q7 840 aa23.96■■□□□ 1.43
PDLIM2-205ENST00000397761 TSHZ2Q9NRE2 1034 aa23.96■■□□□ 1.43
PDLIM2-205ENST00000397761 STK32BQ9NY57 414 aa23.96■■□□□ 1.43
PDLIM2-205ENST00000397761 ARAP2Q8WZ64 1704 aa23.96■■□□□ 1.43
PDLIM2-205ENST00000397761 GTF2E1P29083 439 aaPredicted RBP23.95■■□□□ 1.42
PDLIM2-205ENST00000397761 DDR1Q08345 913 aa23.95■■□□□ 1.42
PDLIM2-205ENST00000397761 TFCP2Q12800 502 aa23.95■■□□□ 1.42
PDLIM2-205ENST00000397761 C3orf67Q6ZVT6 689 aa23.95■■□□□ 1.42
PDLIM2-205ENST00000397761 EAF2Q96CJ1 260 aaPredicted RBP23.95■■□□□ 1.42
PDLIM2-205ENST00000397761 PUS3Q9BZE2 481 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-205ENST00000397761 GSPT1P15170 499 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-205ENST00000397761 RIPOR2Q9Y4F9 1068 aa23.94■■□□□ 1.42
PDLIM2-205ENST00000397761 TTC41PQ6P2S7 1318 aa23.94■■□□□ 1.42
PDLIM2-205ENST00000397761 POLRMTO00411 1230 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-205ENST00000397761 PRR5LQ6MZQ0 368 aa23.94■■□□□ 1.42
PDLIM2-205ENST00000397761 CNBD1Q8NA66 436 aa23.94■■□□□ 1.42
PDLIM2-205ENST00000397761 SERPINB2P05120 415 aa23.93■■□□□ 1.42
PDLIM2-205ENST00000397761 TNNI3KQ59H18 835 aa23.93■■□□□ 1.42
PDLIM2-205ENST00000397761 TAF7LQ5H9L4 462 aa23.93■■□□□ 1.42
PDLIM2-205ENST00000397761 AACSQ86V21 672 aa23.93■■□□□ 1.42
PDLIM2-205ENST00000397761 FPGT-TNNI3KV9GXZ4 949 aa23.93■■□□□ 1.42
PDLIM2-205ENST00000397761 ZNF609O15014 1411 aa23.92■■□□□ 1.42
PDLIM2-205ENST00000397761 NLRP3Q96P20 1036 aa23.92■■□□□ 1.42
PDLIM2-205ENST00000397761 IFIT2P09913 472 aaKnown RBP23.91■■□□□ 1.42
PDLIM2-205ENST00000397761 LDHAL6AQ6ZMR3 332 aa23.91■■□□□ 1.42
PDLIM2-205ENST00000397761 PI4K2BQ8TCG2 481 aa23.91■■□□□ 1.42
PDLIM2-205ENST00000397761 SEC31BQ9NQW1 1179 aa23.91■■□□□ 1.42
PDLIM2-205ENST00000397761 BCL11AQ9H165 835 aa23.9■■□□□ 1.42
PDLIM2-205ENST00000397761 VGLL2Q8N8G2 317 aa23.89■■□□□ 1.42
PDLIM2-205ENST00000397761 CDC5LQ99459 802 aaKnown RBP23.89■■□□□ 1.42
PDLIM2-205ENST00000397761 ECHDC1Q9NTX5 307 aa23.89■■□□□ 1.42
PDLIM2-205ENST00000397761 CEP126Q9P2H0 1117 aa23.89■■□□□ 1.42
PDLIM2-205ENST00000397761 MSH5O43196 834 aa23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 TSHZ3Q63HK5 1081 aa23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 GPATCH3Q96I76 525 aa23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 DBNLQ9UJU6 430 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 MROH5Q6ZUA9 1318 aa23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 PSDA5PKW4 1024 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 ST5P78524 1137 aa23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 CRY2Q49AN0 593 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms