RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 NUTM2GQ5VZR2 741 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 LAMB2P55268 1798 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 NBPF26B4DH59 902 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 NBPF14Q5TI25 921 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 NBPF10Q6P3W6 841 aaKnown RBP7.03□□□□□ -1.28
PTPRD-206ENST00000397617 NBPF15Q8N660 670 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 AFDNP55196 1824 aaKnown RBP7.03□□□□□ -1.28
PTPRD-206ENST00000397617 UBE3BQ7Z3V4 1068 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 ZNF34Q8IZ26 560 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 GNAT2P19087 354 aa7.03□□□□□ -1.28
PTPRD-206ENST00000397617 OS9Q13438 667 aaPredicted RBP7.03□□□□□ -1.28
PTPRD-206ENST00000397617 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.03□□□□□ -1.28
PTPRD-206ENST00000397617 SF3B3Q15393 1217 aaKnown RBP7.02□□□□□ -1.29
PTPRD-206ENST00000397617 SEMA3FQ13275 785 aa7.02□□□□□ -1.29
PTPRD-206ENST00000397617 CCDC57Q2TAC2 916 aa7.02□□□□□ -1.29
PTPRD-206ENST00000397617 EIF2S2P20042 333 aaKnown RBP7.02□□□□□ -1.29
PTPRD-206ENST00000397617 IFIT5Q13325 482 aaKnown RBP7.02□□□□□ -1.29
PTPRD-206ENST00000397617 GSE1Q14687 1217 aa7.02□□□□□ -1.29
PTPRD-206ENST00000397617 RBM27Q9P2N5 1060 aaKnown RBP7.02□□□□□ -1.29
PTPRD-206ENST00000397617 ZNF609O15014 1411 aa7.02□□□□□ -1.29
PTPRD-206ENST00000397617 EAF2Q96CJ1 260 aaPredicted RBP7.02□□□□□ -1.29
PTPRD-206ENST00000397617 NECTIN1Q15223 517 aa7.02□□□□□ -1.29
PTPRD-206ENST00000397617 LETM1O95202 739 aaPredicted RBP7.02□□□□□ -1.29
PTPRD-206ENST00000397617 BRD1O95696 1058 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 HOXA7P31268 230 aaPredicted RBP7.01□□□□□ -1.29
PTPRD-206ENST00000397617 CPLX2Q6PUV4 134 aaKnown RBP7.01□□□□□ -1.29
PTPRD-206ENST00000397617 C15orf52Q6ZUT6 534 aaKnown RBP7.01□□□□□ -1.29
PTPRD-206ENST00000397617 UNC5CLQ8IV45 518 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 NYXQ9GZU5 481 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 SCAND2PQ9GZW5 306 aaPredicted RBP7.01□□□□□ -1.29
PTPRD-206ENST00000397617 ZSWIM6Q9HCJ5 1215 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 TJP1Q07157 1748 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 FLAD1Q8NFF5 587 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 PDE8AO60658 829 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 TNNI3KQ59H18 835 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 CYP46A1Q9Y6A2 500 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 FPGT-TNNI3KV9GXZ4 949 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 CYP19A1P11511 503 aaPredicted RBP7.01□□□□□ -1.29
PTPRD-206ENST00000397617 RGPD3A6NKT7 1758 aaPredicted RBP7.01□□□□□ -1.29
PTPRD-206ENST00000397617 RGPD4Q7Z3J3 1758 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 MMP14P50281 582 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 UBE4AQ14139 1066 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 GRIPAP1Q4V328 841 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 ANO2Q9NQ90 1003 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 MRE11P49959 708 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 PHLPP1O60346 1717 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 DDX60Q8IY21 1712 aaKnown RBP7.01□□□□□ -1.29
PTPRD-206ENST00000397617 AKAP11Q9UKA4 1901 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 TMTC2Q8N394 836 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 BTG4Q9NY30 223 aa7.01□□□□□ -1.29
PTPRD-206ENST00000397617 TOGARAM1Q9Y4F4 1720 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 BCL9LQ86UU0 1499 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 SASH1O94885 1247 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 NLRP10Q86W26 655 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 TTC14Q96N46 770 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 USHBP1Q8N6Y0 703 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 PIGBQ92521 554 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 ZSCAN16Q9H4T2 348 aaPredicted RBP7□□□□□ -1.29
PTPRD-206ENST00000397617 CCDC87Q9NVE4 849 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 ZNF445P59923 1031 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 APPBP2Q92624 585 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 SUCLG2Q96I99 432 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 LSG1Q9H089 658 aaKnown RBP7□□□□□ -1.29
PTPRD-206ENST00000397617 IQSEC3Q9UPP2 1182 aaPredicted RBP7□□□□□ -1.29
PTPRD-206ENST00000397617 SSFA2P28290 1259 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 SLC27A3Q5K4L6 730 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 CCDC158Q5M9N0 1113 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 ZNF804BA4D1E1 1349 aa7□□□□□ -1.29
PTPRD-206ENST00000397617 FSD2A1L4K1 749 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 PDE8BO95263 885 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 PPP4R3BQ5MIZ7 849 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 BLOC1S2Q6QNY1 142 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 LMBR1LQ6UX01 489 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 NID2Q14112 1375 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 MCMDC2Q4G0Z9 681 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 ZMYM1Q5SVZ6 1142 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 LPIN2Q92539 896 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 MIS18AQ9NYP9 233 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 THSD7AQ9UPZ6 1657 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 NAA16Q6N069 864 aaPredicted RBP6.99□□□□□ -1.29
PTPRD-206ENST00000397617 AACSQ86V21 672 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 GNL3LQ9NVN8 582 aaKnown RBP6.99□□□□□ -1.29
PTPRD-206ENST00000397617 PNPLA7Q6ZV29 1317 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 LOC102724428A0A0B4J2F2 783 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 ANKRD18BA2A2Z9 1011 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 NEK4P51957 841 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 SIK1P57059 783 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 DBNLQ9UJU6 430 aaKnown RBP6.99□□□□□ -1.29
PTPRD-206ENST00000397617 MYH14Q7Z406 1995 aaKnown RBP6.99□□□□□ -1.29
PTPRD-206ENST00000397617 MCM5P33992 734 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 CHRNA2Q15822 529 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 CCDC178Q5BJE1 867 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 COL5A3P25940 1745 aaPredicted RBP6.99□□□□□ -1.29
PTPRD-206ENST00000397617 SEC24BO95487 1268 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 LIFRP42702 1097 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 ZNF274Q96GC6 653 aaPredicted RBP6.99□□□□□ -1.29
PTPRD-206ENST00000397617 SUGT1Q9Y2Z0 365 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 ARAP2Q8WZ64 1704 aa6.99□□□□□ -1.29
PTPRD-206ENST00000397617 ANP32BQ92688 251 aaKnown RBP6.98□□□□□ -1.29
PTPRD-206ENST00000397617 BICC1Q9H694 974 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms