RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 JARID2Q92833 1246 aaPredicted RBP23.42■■□□□ 1.34
TSPAN4-204ENST00000397404 GPATCH3Q96I76 525 aa23.42■■□□□ 1.34
TSPAN4-204ENST00000397404 SF3B3Q15393 1217 aaKnown RBP23.41■■□□□ 1.34
TSPAN4-204ENST00000397404 TAF7LQ5H9L4 462 aa23.41■■□□□ 1.34
TSPAN4-204ENST00000397404 AMIGO3Q86WK7 504 aa23.41■■□□□ 1.34
TSPAN4-204ENST00000397404 EYA2O00167 538 aa23.4■■□□□ 1.34
TSPAN4-204ENST00000397404 ZNF827Q17R98 1081 aa23.4■■□□□ 1.34
TSPAN4-204ENST00000397404 FAM161AQ3B820 660 aa23.4■■□□□ 1.34
TSPAN4-204ENST00000397404 PLEKHM2Q8IWE5 1019 aa23.4■■□□□ 1.34
TSPAN4-204ENST00000397404 STAP2Q9UGK3 403 aa23.4■■□□□ 1.34
TSPAN4-204ENST00000397404 DDX60Q8IY21 1712 aaKnown RBP23.4■■□□□ 1.34
TSPAN4-204ENST00000397404 EN1Q05925 392 aaPredicted RBP23.39■■□□□ 1.34
TSPAN4-204ENST00000397404 SLC15A2Q16348 729 aa23.39■■□□□ 1.34
TSPAN4-204ENST00000397404 TTC41PQ6P2S7 1318 aa23.39■■□□□ 1.33
TSPAN4-204ENST00000397404 ITGA6P23229 1130 aa23.38■■□□□ 1.33
TSPAN4-204ENST00000397404 TM4SF1P30408 202 aa23.38■■□□□ 1.33
TSPAN4-204ENST00000397404 NFIXQ14938 502 aa23.38■■□□□ 1.33
TSPAN4-204ENST00000397404 EZH2Q15910 746 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-204ENST00000397404 NLRP3Q96P20 1036 aa23.38■■□□□ 1.33
TSPAN4-204ENST00000397404 PA2G4Q9UQ80 394 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-204ENST00000397404 APBB1O00213 710 aa23.37■■□□□ 1.33
TSPAN4-204ENST00000397404 MX1P20591 662 aa23.37■■□□□ 1.33
TSPAN4-204ENST00000397404 CNBD1Q8NA66 436 aa23.37■■□□□ 1.33
TSPAN4-204ENST00000397404 CDC5LQ99459 802 aaKnown RBP23.37■■□□□ 1.33
TSPAN4-204ENST00000397404 SALL3Q9BXA9 1300 aa23.37■■□□□ 1.33
TSPAN4-204ENST00000397404 ST5P78524 1137 aa23.36■■□□□ 1.33
TSPAN4-204ENST00000397404 BICDL1Q6ZP65 573 aa23.36■■□□□ 1.33
TSPAN4-204ENST00000397404 AKAP2Q9Y2D5 859 aa23.36■■□□□ 1.33
TSPAN4-204ENST00000397404 ERC2O15083 957 aa23.36■■□□□ 1.33
TSPAN4-204ENST00000397404 NPHP1O15259 732 aa23.36■■□□□ 1.33
TSPAN4-204ENST00000397404 IFIT2P09913 472 aaKnown RBP23.36■■□□□ 1.33
TSPAN4-204ENST00000397404 PDE1AP54750 535 aa23.36■■□□□ 1.33
TSPAN4-204ENST00000397404 PNPLA7Q6ZV29 1317 aa23.35■■□□□ 1.33
TSPAN4-204ENST00000397404 SMARCA5O60264 1052 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-204ENST00000397404 SASH1O94885 1247 aa23.35■■□□□ 1.33
TSPAN4-204ENST00000397404 HCLS1P14317 486 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-204ENST00000397404 ERFEQ4G0M1 354 aa23.35■■□□□ 1.33
TSPAN4-204ENST00000397404 COL23A1Q86Y22 540 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-204ENST00000397404 SIL1Q9H173 461 aa23.35■■□□□ 1.33
TSPAN4-204ENST00000397404 GREM2Q9H772 168 aa23.35■■□□□ 1.33
TSPAN4-204ENST00000397404 TUBGCP6Q96RT7 1819 aa23.34■■□□□ 1.33
TSPAN4-204ENST00000397404 IGHMBP2P38935 993 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-204ENST00000397404 NUTM1Q86Y26 1132 aa23.34■■□□□ 1.33
TSPAN4-204ENST00000397404 SYNE4Q8N205 404 aa23.34■■□□□ 1.33
TSPAN4-204ENST00000397404 CEP126Q9P2H0 1117 aa23.34■■□□□ 1.33
TSPAN4-204ENST00000397404 LRP5O75197 1615 aa23.34■■□□□ 1.33
TSPAN4-204ENST00000397404 MROH5Q6ZUA9 1318 aa23.33■■□□□ 1.33
TSPAN4-204ENST00000397404 FAM177BA6PVY3 158 aa23.33■■□□□ 1.33
TSPAN4-204ENST00000397404 TTC22Q5TAA0 569 aa23.33■■□□□ 1.33
TSPAN4-204ENST00000397404 LDHAL6AQ6ZMR3 332 aa23.33■■□□□ 1.33
TSPAN4-204ENST00000397404 ATG9AQ7Z3C6 839 aa23.33■■□□□ 1.33
TSPAN4-204ENST00000397404 SLC16A10Q8TF71 515 aa23.32■■□□□ 1.32
TSPAN4-204ENST00000397404 MPHOSPH8Q99549 860 aa23.32■■□□□ 1.32
TSPAN4-204ENST00000397404 IL1RAPL2Q9NP60 686 aa23.32■■□□□ 1.32
TSPAN4-204ENST00000397404 GLRX3O76003 335 aaKnown RBP23.31■■□□□ 1.32
TSPAN4-204ENST00000397404 SERPINB2P05120 415 aa23.31■■□□□ 1.32
TSPAN4-204ENST00000397404 KLHDC4Q8TBB5 520 aa23.31■■□□□ 1.32
TSPAN4-204ENST00000397404 BACH2Q9BYV9 841 aa23.31■■□□□ 1.32
TSPAN4-204ENST00000397404 TNNI3KQ59H18 835 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 SMIM5Q71RC9 77 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 AACSQ86V21 672 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 SKAP1Q86WV1 359 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 CNNM1Q9NRU3 951 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 ECHDC1Q9NTX5 307 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 RIPOR2Q9Y4F9 1068 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 FPGT-TNNI3KV9GXZ4 949 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 POLRMTO00411 1230 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 MSH5O43196 834 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 TICAM2Q86XR7 235 aa23.3■■□□□ 1.32
TSPAN4-204ENST00000397404 TFCP2Q12800 502 aa23.29■■□□□ 1.32
TSPAN4-204ENST00000397404 PRR5LQ6MZQ0 368 aa23.29■■□□□ 1.32
TSPAN4-204ENST00000397404 C16orf71Q8IYS4 520 aaPredicted RBP23.29■■□□□ 1.32
TSPAN4-204ENST00000397404 ABCC12Q96J65 1359 aa23.28■■□□□ 1.32
TSPAN4-204ENST00000397404 NRXN2Q9P2S2 1712 aa23.28■■□□□ 1.32
TSPAN4-204ENST00000397404 CASC1Q6TDU7 716 aa23.28■■□□□ 1.32
TSPAN4-204ENST00000397404 ANKRD18AQ8IVF6 992 aa23.28■■□□□ 1.32
TSPAN4-204ENST00000397404 PARP3Q9Y6F1 533 aa23.28■■□□□ 1.32
TSPAN4-204ENST00000397404 DDX46Q7L014 1031 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-204ENST00000397404 EAF2Q96CJ1 260 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-204ENST00000397404 BSDC1Q9NW68 430 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-204ENST00000397404 KLRG2A4D1S0 409 aaPredicted RBP23.26■■□□□ 1.31
TSPAN4-204ENST00000397404 C8orf34Q49A92 452 aa23.26■■□□□ 1.31
TSPAN4-204ENST00000397404 ZNF594Q96JF6 807 aaPredicted RBP23.26■■□□□ 1.31
TSPAN4-204ENST00000397404 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
TSPAN4-204ENST00000397404 CRY2Q49AN0 593 aa23.25■■□□□ 1.31
TSPAN4-204ENST00000397404 LRRC24Q50LG9 513 aa23.25■■□□□ 1.31
TSPAN4-204ENST00000397404 METTL24Q5JXM2 366 aa23.25■■□□□ 1.31
TSPAN4-204ENST00000397404 TMC4Q7Z404 712 aa23.25■■□□□ 1.31
TSPAN4-204ENST00000397404 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
TSPAN4-204ENST00000397404 BRIP1Q9BX63 1249 aa23.25■■□□□ 1.31
TSPAN4-204ENST00000397404 ZNF609O15014 1411 aa23.25■■□□□ 1.31
TSPAN4-204ENST00000397404 PDE8BO95263 885 aa23.24■■□□□ 1.31
TSPAN4-204ENST00000397404 OTUD7AQ8TE49 926 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-204ENST00000397404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.24■■□□□ 1.31
TSPAN4-204ENST00000397404 CCDC85AQ96PX6 553 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-204ENST00000397404 DDR1Q08345 913 aa23.24■■□□□ 1.31
TSPAN4-204ENST00000397404 CDC45O75419 566 aa23.23■■□□□ 1.31
TSPAN4-204ENST00000397404 GSPT1P15170 499 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-204ENST00000397404 RPS8P62241 208 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-204ENST00000397404 PUM3Q15397 648 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms