RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PKD1L3Q7Z443 1732 aa28.43■■■□□ 2.14
PABPN1-202ENST00000397276 STX6O43752 255 aa28.43■■■□□ 2.14
PABPN1-202ENST00000397276 FOXO4P98177 505 aa28.43■■■□□ 2.14
PABPN1-202ENST00000397276 ME3Q16798 604 aa28.43■■■□□ 2.14
PABPN1-202ENST00000397276 SOS2Q07890 1332 aaPredicted RBP28.43■■■□□ 2.14
PABPN1-202ENST00000397276 ATP5JP18859 108 aa28.43■■■□□ 2.14
PABPN1-202ENST00000397276 GJB2P29033 226 aa28.43■■■□□ 2.14
PABPN1-202ENST00000397276 CWC25Q9NXE8 425 aaPredicted RBP28.43■■■□□ 2.14
PABPN1-202ENST00000397276 DDX46Q7L014 1031 aaKnown RBP28.42■■■□□ 2.14
PABPN1-202ENST00000397276 KCNB2Q92953 911 aa28.42■■■□□ 2.14
PABPN1-202ENST00000397276 SEC62Q99442 399 aaKnown RBP28.42■■■□□ 2.14
PABPN1-202ENST00000397276 CCDC129Q6ZRS4 1044 aa28.42■■■□□ 2.14
PABPN1-202ENST00000397276 TM6SF1Q9BZW5 370 aa28.42■■■□□ 2.14
PABPN1-202ENST00000397276 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.42■■■□□ 2.14
PABPN1-202ENST00000397276 R3HCC1Q9Y3T6 440 aaKnown RBP28.42■■■□□ 2.14
PABPN1-202ENST00000397276 H7C1W4 665 aa28.41■■■□□ 2.14
PABPN1-202ENST00000397276 ZNF594Q96JF6 807 aaPredicted RBP28.41■■■□□ 2.14
PABPN1-202ENST00000397276 CNPY2Q9Y2B0 182 aa28.41■■■□□ 2.14
PABPN1-202ENST00000397276 ABCC6O95255 1503 aa28.41■■■□□ 2.14
PABPN1-202ENST00000397276 COL5A2P05997 1499 aaPredicted RBP28.41■■■□□ 2.14
PABPN1-202ENST00000397276 MBD3O95983 291 aa28.41■■■□□ 2.14
PABPN1-202ENST00000397276 ZSCAN22P10073 491 aaPredicted RBP28.41■■■□□ 2.14
PABPN1-202ENST00000397276 TIMM10P62072 90 aa28.4■■■□□ 2.14
PABPN1-202ENST00000397276 TPCN1Q9ULQ1 816 aa28.4■■■□□ 2.14
PABPN1-202ENST00000397276 CARD10Q9BWT7 1032 aa28.4■■■□□ 2.14
PABPN1-202ENST00000397276 AFDNP55196 1824 aaKnown RBP28.4■■■□□ 2.14
PABPN1-202ENST00000397276 ST3GAL1Q11201 340 aa28.39■■■□□ 2.13
PABPN1-202ENST00000397276 SLFNL1Q499Z3 407 aa28.39■■■□□ 2.13
PABPN1-202ENST00000397276 TAF5LO75529 589 aa28.38■■■□□ 2.13
PABPN1-202ENST00000397276 RNF20Q5VTR2 975 aa28.38■■■□□ 2.13
PABPN1-202ENST00000397276 ARFGEF2Q9Y6D5 1785 aa28.38■■■□□ 2.13
PABPN1-202ENST00000397276 BLOC1S2Q6QNY1 142 aa28.38■■■□□ 2.13
PABPN1-202ENST00000397276 PDCL3Q9H2J4 239 aa28.38■■■□□ 2.13
PABPN1-202ENST00000397276 PSMA5P28066 241 aa28.37■■■□□ 2.13
PABPN1-202ENST00000397276 LRRC24Q50LG9 513 aa28.37■■■□□ 2.13
PABPN1-202ENST00000397276 CCDC85AQ96PX6 553 aaPredicted RBP28.37■■■□□ 2.13
PABPN1-202ENST00000397276 MED23Q9ULK4 1368 aa28.37■■■□□ 2.13
PABPN1-202ENST00000397276 LRSAM1Q6UWE0 723 aa28.37■■■□□ 2.13
PABPN1-202ENST00000397276 XIRP1Q702N8 1843 aaKnown RBP28.37■■■□□ 2.13
PABPN1-202ENST00000397276 ATG9AQ7Z3C6 839 aa28.36■■■□□ 2.13
PABPN1-202ENST00000397276 RNF214Q8ND24 703 aa28.36■■■□□ 2.13
PABPN1-202ENST00000397276 ZSCAN31Q96LW9 406 aaPredicted RBP28.36■■■□□ 2.13
PABPN1-202ENST00000397276 PLEKHG2Q9H7P9 1386 aa28.36■■■□□ 2.13
PABPN1-202ENST00000397276 NKX1-1Q15270 411 aaPredicted RBP28.36■■■□□ 2.13
PABPN1-202ENST00000397276 SNRKQ9NRH2 765 aa28.36■■■□□ 2.13
PABPN1-202ENST00000397276 VPS37CA5D8V6 355 aaPredicted RBP28.35■■■□□ 2.13
PABPN1-202ENST00000397276 GLI3P10071 1580 aa28.35■■■□□ 2.13
PABPN1-202ENST00000397276 COL15A1P39059 1388 aa28.35■■■□□ 2.13
PABPN1-202ENST00000397276 SH2B1Q9NRF2 756 aaPredicted RBP28.35■■■□□ 2.13
PABPN1-202ENST00000397276 F13A1P00488 732 aa28.35■■■□□ 2.13
PABPN1-202ENST00000397276 STK3Q13188 491 aa28.35■■■□□ 2.13
PABPN1-202ENST00000397276 DNAJC5Q9H3Z4 198 aa28.35■■■□□ 2.13
PABPN1-202ENST00000397276 TMOD3Q9NYL9 352 aa28.35■■■□□ 2.13
PABPN1-202ENST00000397276 FIBPO43427 364 aa28.34■■■□□ 2.13
PABPN1-202ENST00000397276 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.34■■■□□ 2.13
PABPN1-202ENST00000397276 FAM13BQ9NYF5 915 aa28.34■■■□□ 2.13
PABPN1-202ENST00000397276 ASAP1Q9ULH1 1129 aa28.34■■■□□ 2.13
PABPN1-202ENST00000397276 GOLIM4O00461 696 aa28.33■■■□□ 2.13
PABPN1-202ENST00000397276 HAUS7Q99871 368 aa28.33■■■□□ 2.13
PABPN1-202ENST00000397276 PDLIM2Q96JY6 352 aa28.33■■■□□ 2.13
PABPN1-202ENST00000397276 PUS3Q9BZE2 481 aaKnown RBP28.33■■■□□ 2.13
PABPN1-202ENST00000397276 NOL7Q9UMY1 257 aaKnown RBP28.33■■■□□ 2.13
PABPN1-202ENST00000397276 CCDC191Q8NCU4 936 aa28.33■■■□□ 2.13
PABPN1-202ENST00000397276 RPS6KB1P23443 525 aa28.32■■■□□ 2.12
PABPN1-202ENST00000397276 MTMR6Q9Y217 621 aa28.31■■■□□ 2.12
PABPN1-202ENST00000397276 ZNF609O15014 1411 aa28.31■■■□□ 2.12
PABPN1-202ENST00000397276 DNM1Q05193 864 aaKnown RBP28.3■■■□□ 2.12
PABPN1-202ENST00000397276 DNAJC10Q8IXB1 793 aa28.3■■■□□ 2.12
PABPN1-202ENST00000397276 KCPQ6ZWJ8 1503 aa28.3■■■□□ 2.12
PABPN1-202ENST00000397276 TOB2Q14106 344 aaPredicted RBP28.29■■■□□ 2.12
PABPN1-202ENST00000397276 MCMDC2Q4G0Z9 681 aa28.29■■■□□ 2.12
PABPN1-202ENST00000397276 ARID3AQ99856 593 aa28.29■■■□□ 2.12
PABPN1-202ENST00000397276 BTG4Q9NY30 223 aa28.29■■■□□ 2.12
PABPN1-202ENST00000397276 TCHHQ07283 1943 aa28.29■■■□□ 2.12
PABPN1-202ENST00000397276 LARP1BQ659C4 914 aaKnown RBP28.29■■■□□ 2.12
PABPN1-202ENST00000397276 PARP4Q9UKK3 1724 aaKnown RBP28.29■■■□□ 2.12
PABPN1-202ENST00000397276 FERMT3Q86UX7 667 aa28.28■■■□□ 2.12
PABPN1-202ENST00000397276 FAM89AQ96GI7 184 aa28.28■■■□□ 2.12
PABPN1-202ENST00000397276 IL15P40933 162 aaPredicted RBP28.28■■■□□ 2.12
PABPN1-202ENST00000397276 PIGBQ92521 554 aa28.28■■■□□ 2.12
PABPN1-202ENST00000397276 EYA2O00167 538 aa28.28■■■□□ 2.12
PABPN1-202ENST00000397276 KBTBD3Q8NAB2 608 aa28.28■■■□□ 2.12
PABPN1-202ENST00000397276 SYAP1Q96A49 352 aaPredicted RBP28.28■■■□□ 2.12
PABPN1-202ENST00000397276 PAG1Q9NWQ8 432 aa28.28■■■□□ 2.12
PABPN1-202ENST00000397276 LRRC2Q9BYS8 371 aa28.27■■■□□ 2.12
PABPN1-202ENST00000397276 HMG20BQ9P0W2 317 aa28.27■■■□□ 2.12
PABPN1-202ENST00000397276 LAMB4A4D0S4 1761 aa28.26■■■□□ 2.12
PABPN1-202ENST00000397276 A0A1B0GUL7 405 aa28.26■■■□□ 2.11
PABPN1-202ENST00000397276 ATP6V1DQ9Y5K8 247 aa28.26■■■□□ 2.11
PABPN1-202ENST00000397276 CYP21A2P08686 494 aa28.26■■■□□ 2.11
PABPN1-202ENST00000397276 NEK1Q96PY6 1258 aa28.26■■■□□ 2.11
PABPN1-202ENST00000397276 ZNF500O60304 480 aaPredicted RBP28.25■■■□□ 2.11
PABPN1-202ENST00000397276 USPL1Q5W0Q7 1092 aa28.25■■■□□ 2.11
PABPN1-202ENST00000397276 FAM173BQ6P4H8 233 aa28.25■■■□□ 2.11
PABPN1-202ENST00000397276 SYNE4Q8N205 404 aa28.25■■■□□ 2.11
PABPN1-202ENST00000397276 TCIRG1Q13488 830 aa28.25■■■□□ 2.11
PABPN1-202ENST00000397276 ANKRD1Q15327 319 aa28.25■■■□□ 2.11
PABPN1-202ENST00000397276 CCDC57Q2TAC2 916 aa28.25■■■□□ 2.11
PABPN1-202ENST00000397276 IFIT1P09914 478 aaKnown RBP28.24■■■□□ 2.11
PABPN1-202ENST00000397276 HS1BP3Q53T59 392 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms