RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 RUFY2Q8WXA3 655 aa12.07□□□□□ -0.48
FGFR1-209ENST00000397113 TCHHQ07283 1943 aa12.07□□□□□ -0.48
FGFR1-209ENST00000397113 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
FGFR1-209ENST00000397113 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
FGFR1-209ENST00000397113 SF3A1Q15459 793 aaKnown RBP12.07□□□□□ -0.48
FGFR1-209ENST00000397113 BLOC1S2Q6QNY1 142 aa12.07□□□□□ -0.48
FGFR1-209ENST00000397113 FAM227BQ96M60 508 aa12.07□□□□□ -0.48
FGFR1-209ENST00000397113 MRVI1Q9Y6F6 885 aa12.07□□□□□ -0.48
FGFR1-209ENST00000397113 MRC1P22897 1456 aa12.07□□□□□ -0.48
FGFR1-209ENST00000397113 RGPD5Q99666 1765 aa12.07□□□□□ -0.48
FGFR1-209ENST00000397113 ME1P48163 572 aa12.07□□□□□ -0.48
FGFR1-209ENST00000397113 NGDNQ8NEJ9 315 aaKnown RBP12.07□□□□□ -0.48
FGFR1-209ENST00000397113 FTOQ9C0B1 505 aaKnown RBP eCLIP12.07□□□□□ -0.48
FGFR1-209ENST00000397113 SGSM2O43147 1006 aa12.06□□□□□ -0.48
FGFR1-209ENST00000397113 JAK2O60674 1132 aa12.06□□□□□ -0.48
FGFR1-209ENST00000397113 CCDC144BQ3MJ40 725 aa12.06□□□□□ -0.48
FGFR1-209ENST00000397113 CERS3Q8IU89 383 aa12.06□□□□□ -0.48
FGFR1-209ENST00000397113 CCDC144CPQ8IYA2 1237 aa12.06□□□□□ -0.48
FGFR1-209ENST00000397113 KRT222Q8N1A0 295 aa12.06□□□□□ -0.48
FGFR1-209ENST00000397113 RAB11FIP4Q86YS3 637 aa12.06□□□□□ -0.48
FGFR1-209ENST00000397113 SMTNL1A8MU46 457 aa12.06□□□□□ -0.48
FGFR1-209ENST00000397113 COL9A3Q14050 684 aaPredicted RBP12.06□□□□□ -0.48
FGFR1-209ENST00000397113 EDC3Q96F86 508 aaKnown RBP12.06□□□□□ -0.48
FGFR1-209ENST00000397113 SPTLC3Q9NUV7 552 aa12.06□□□□□ -0.48
FGFR1-209ENST00000397113 RBM8AQ9Y5S9 174 aaKnown RBP12.06□□□□□ -0.48
FGFR1-209ENST00000397113 ATP10DQ9P241 1426 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 CCT2P78371 535 aaKnown RBP12.05□□□□□ -0.48
FGFR1-209ENST00000397113 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 RPAP1Q9BWH6 1393 aaPredicted RBP12.05□□□□□ -0.48
FGFR1-209ENST00000397113 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 PI4KAP2A4QPH2 592 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 ZNF75DP51815 510 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 PI4KAP1Q8N8J0 262 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 ZSWIM4Q9H7M6 989 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 CCDC66A2RUB6 948 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 CCDC69A6NI79 296 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 TEFQ10587 303 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 CCDC73Q6ZRK6 1079 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 DNAJC2Q99543 621 aaKnown RBP12.05□□□□□ -0.48
FGFR1-209ENST00000397113 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 COL16A1Q07092 1604 aaPredicted RBP12.05□□□□□ -0.48
FGFR1-209ENST00000397113 RAD50Q92878 1312 aa12.05□□□□□ -0.48
FGFR1-209ENST00000397113 RGS12O14924 1447 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 KINO60870 393 aaKnown RBP12.04□□□□□ -0.48
FGFR1-209ENST00000397113 KIF1BPQ96EK5 621 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 GPATCH3Q96I76 525 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 USP44Q9H0E7 712 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 SOS1Q07889 1333 aaPredicted RBP12.04□□□□□ -0.48
FGFR1-209ENST00000397113 SYT10Q6XYQ8 523 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 MNS1Q8NEH6 495 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 KLHDC4Q8TBB5 520 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 HYPKQ9NX55 129 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 KIF18AQ8NI77 898 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 FEZ1Q99689 392 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 CTNNA3Q9UI47 895 aa12.04□□□□□ -0.48
FGFR1-209ENST00000397113 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
FGFR1-209ENST00000397113 TAF7LQ5H9L4 462 aa12.03□□□□□ -0.48
FGFR1-209ENST00000397113 CHST3Q7LGC8 479 aa12.03□□□□□ -0.48
FGFR1-209ENST00000397113 AOPEPQ8N6M6 819 aa12.03□□□□□ -0.48
FGFR1-209ENST00000397113 WASLO00401 505 aaPredicted RBP12.03□□□□□ -0.48
FGFR1-209ENST00000397113 BRF1Q92994 677 aa12.02□□□□□ -0.48
FGFR1-209ENST00000397113 URI1O94763 535 aaPredicted RBP12.02□□□□□ -0.49
FGFR1-209ENST00000397113 PDCP20941 246 aa12.02□□□□□ -0.49
FGFR1-209ENST00000397113 KMT5BQ4FZB7 885 aa12.02□□□□□ -0.49
FGFR1-209ENST00000397113 FBXO38Q6PIJ6 1188 aa12.02□□□□□ -0.49
FGFR1-209ENST00000397113 TMC6Q7Z403 805 aa12.02□□□□□ -0.49
FGFR1-209ENST00000397113 CCDC34Q96HJ3 373 aa12.02□□□□□ -0.49
FGFR1-209ENST00000397113 NOL10Q9BSC4 688 aaKnown RBP12.02□□□□□ -0.49
FGFR1-209ENST00000397113 TRIM34Q9BYJ4 488 aa12.02□□□□□ -0.49
FGFR1-209ENST00000397113 OSBPL3Q9H4L5 887 aa12.02□□□□□ -0.49
FGFR1-209ENST00000397113 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
FGFR1-209ENST00000397113 TTLL5Q6EMB2 1281 aa12.02□□□□□ -0.49
FGFR1-209ENST00000397113 CREBRFQ8IUR6 639 aa12.02□□□□□ -0.49
FGFR1-209ENST00000397113 SCAND2PQ9GZW5 306 aaPredicted RBP12.02□□□□□ -0.49
FGFR1-209ENST00000397113 LSG1Q9H089 658 aaKnown RBP12.02□□□□□ -0.49
FGFR1-209ENST00000397113 NRDCO43847 1150 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 PDILTQ8N807 584 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 LEO1Q8WVC0 666 aaPredicted RBP12.01□□□□□ -0.49
FGFR1-209ENST00000397113 TIGD1Q96MW7 591 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 PAXBP1Q9Y5B6 917 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 TAF6LQ9Y6J9 622 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
FGFR1-209ENST00000397113 NMIQ13287 307 aaPredicted RBP12.01□□□□□ -0.49
FGFR1-209ENST00000397113 CREB3L3Q68CJ9 461 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 C11orf57Q6ZUT1 292 aaPredicted RBP12.01□□□□□ -0.49
FGFR1-209ENST00000397113 CCAR1Q8IX12 1150 aaKnown RBP12.01□□□□□ -0.49
FGFR1-209ENST00000397113 NEK11Q8NG66 645 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 EPC1Q9H2F5 836 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 NLRP6P59044 892 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 G3BP1Q13283 466 aaKnown RBP eCLIP12.01□□□□□ -0.49
FGFR1-209ENST00000397113 ARHGAP29Q52LW3 1261 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 DNAI1Q9UI46 699 aa12.01□□□□□ -0.49
FGFR1-209ENST00000397113 SNW1Q13573 536 aaKnown RBP12□□□□□ -0.49
FGFR1-209ENST00000397113 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
FGFR1-209ENST00000397113 RNF20Q5VTR2 975 aa12□□□□□ -0.49
FGFR1-209ENST00000397113 ANKRD7Q92527 254 aa12□□□□□ -0.49
FGFR1-209ENST00000397113 CHPF2Q9P2E5 772 aa12□□□□□ -0.49
FGFR1-209ENST00000397113 MAP3K19Q56UN5 1328 aa12□□□□□ -0.49
FGFR1-209ENST00000397113 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms