RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TOMM70O94826 608 aa18.58■□□□□ 0.56
SEC13-208ENST00000397109 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
SEC13-208ENST00000397109 IARSP41252 1262 aaKnown RBP18.58■□□□□ 0.56
SEC13-208ENST00000397109 DNAAF4Q8WXU2 420 aa18.58■□□□□ 0.56
SEC13-208ENST00000397109 RRAGCQ9HB90 399 aa18.58■□□□□ 0.56
SEC13-208ENST00000397109 PDE8AO60658 829 aa18.57■□□□□ 0.56
SEC13-208ENST00000397109 VEGFAP15692 232 aaPredicted RBP18.57■□□□□ 0.56
SEC13-208ENST00000397109 SLFN5Q08AF3 891 aa18.57■□□□□ 0.56
SEC13-208ENST00000397109 NEURL1BA8MQ27 555 aa18.56■□□□□ 0.56
SEC13-208ENST00000397109 SUPT20HQ8NEM7 779 aa18.56■□□□□ 0.56
SEC13-208ENST00000397109 JDP2Q8WYK2 163 aa18.56■□□□□ 0.56
SEC13-208ENST00000397109 VPS33BQ9H267 617 aa18.56■□□□□ 0.56
SEC13-208ENST00000397109 CDHR2Q9BYE9 1310 aa18.56■□□□□ 0.56
SEC13-208ENST00000397109 CCDC152Q4G0S7 254 aa18.55■□□□□ 0.56
SEC13-208ENST00000397109 LINS1Q8NG48 757 aa18.55■□□□□ 0.56
SEC13-208ENST00000397109 CWF19L2Q2TBE0 894 aaKnown RBP18.54■□□□□ 0.56
SEC13-208ENST00000397109 MPNDQ8N594 471 aa18.54■□□□□ 0.56
SEC13-208ENST00000397109 DPP8Q6V1X1 898 aaPredicted RBP18.53■□□□□ 0.56
SEC13-208ENST00000397109 RBM46Q8TBY0 533 aaKnown RBP18.53■□□□□ 0.56
SEC13-208ENST00000397109 RTFDC1Q9BY42 306 aaPredicted RBP18.53■□□□□ 0.56
SEC13-208ENST00000397109 H7C1W4 665 aa18.52■□□□□ 0.56
SEC13-208ENST00000397109 FZD9O00144 591 aa18.52■□□□□ 0.56
SEC13-208ENST00000397109 RPS8P62241 208 aaKnown RBP18.52■□□□□ 0.56
SEC13-208ENST00000397109 GCKRQ14397 625 aa18.52■□□□□ 0.56
SEC13-208ENST00000397109 LARGE2Q8N3Y3 721 aa18.52■□□□□ 0.56
SEC13-208ENST00000397109 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
SEC13-208ENST00000397109 CELF1Q92879 486 aaKnown RBP18.52■□□□□ 0.56
SEC13-208ENST00000397109 DDNO94850 711 aaPredicted RBP18.52■□□□□ 0.55
SEC13-208ENST00000397109 TAF1P21675 1872 aa18.52■□□□□ 0.55
SEC13-208ENST00000397109 WDR90Q96KV7 1748 aa18.51■□□□□ 0.55
SEC13-208ENST00000397109 PPIP5K2O43314 1243 aa18.51■□□□□ 0.55
SEC13-208ENST00000397109 CTSWP56202 376 aa18.51■□□□□ 0.55
SEC13-208ENST00000397109 HNRNPUQ00839 825 aaKnown RBP eCLIP18.51■□□□□ 0.55
SEC13-208ENST00000397109 TRMT2AQ8IZ69 625 aaKnown RBP18.51■□□□□ 0.55
SEC13-208ENST00000397109 EIF6P56537 245 aaKnown RBP18.5■□□□□ 0.55
SEC13-208ENST00000397109 FSTL1Q12841 308 aa18.5■□□□□ 0.55
SEC13-208ENST00000397109 UBE3BQ7Z3V4 1068 aa18.5■□□□□ 0.55
SEC13-208ENST00000397109 SLC51AQ86UW1 340 aa18.5■□□□□ 0.55
SEC13-208ENST00000397109 NIM1KQ8IY84 436 aa18.5■□□□□ 0.55
SEC13-208ENST00000397109 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
SEC13-208ENST00000397109 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
SEC13-208ENST00000397109 IQCA1LA6NCM1 817 aa18.49■□□□□ 0.55
SEC13-208ENST00000397109 POTECB2RU33 542 aa18.49■□□□□ 0.55
SEC13-208ENST00000397109 F6X3S4 739 aa18.49■□□□□ 0.55
SEC13-208ENST00000397109 L3MBTL3Q96JM7 780 aaPredicted RBP18.49■□□□□ 0.55
SEC13-208ENST00000397109 PLA2G12BQ9BX93 195 aa18.49■□□□□ 0.55
SEC13-208ENST00000397109 SEC31BQ9NQW1 1179 aa18.49■□□□□ 0.55
SEC13-208ENST00000397109 ZNF541Q9H0D2 1346 aa18.48■□□□□ 0.55
SEC13-208ENST00000397109 CT47B1P0C2W7 299 aaPredicted RBP18.48■□□□□ 0.55
SEC13-208ENST00000397109 HSPA6P17066 643 aa18.48■□□□□ 0.55
SEC13-208ENST00000397109 AOC3Q16853 763 aa18.48■□□□□ 0.55
SEC13-208ENST00000397109 BEND3Q5T5X7 828 aa18.48■□□□□ 0.55
SEC13-208ENST00000397109 TTLL11Q8NHH1 800 aa18.48■□□□□ 0.55
SEC13-208ENST00000397109 CDC5LQ99459 802 aaKnown RBP18.48■□□□□ 0.55
SEC13-208ENST00000397109 KIAA2012Q0VF49 1180 aa18.47■□□□□ 0.55
SEC13-208ENST00000397109 ALDH1L2Q3SY69 923 aa18.47■□□□□ 0.55
SEC13-208ENST00000397109 ANKRD18AQ8IVF6 992 aa18.47■□□□□ 0.55
SEC13-208ENST00000397109 GPC2Q8N158 579 aa18.47■□□□□ 0.55
SEC13-208ENST00000397109 MRPL50Q8N5N7 158 aaKnown RBP18.47■□□□□ 0.55
SEC13-208ENST00000397109 SMC1BQ8NDV3 1235 aa18.47■□□□□ 0.55
SEC13-208ENST00000397109 NSFL1CQ9UNZ2 370 aaKnown RBP18.47■□□□□ 0.55
SEC13-208ENST00000397109 LRRC37AA6NMS7 1700 aa18.47■□□□□ 0.55
SEC13-208ENST00000397109 MYH3P11055 1940 aa18.47■□□□□ 0.55
SEC13-208ENST00000397109 CASP7P55210 303 aa18.46■□□□□ 0.55
SEC13-208ENST00000397109 CCDC85AQ96PX6 553 aaPredicted RBP18.46■□□□□ 0.55
SEC13-208ENST00000397109 RTL9Q8NET4 1388 aa18.46■□□□□ 0.55
SEC13-208ENST00000397109 PTPRCP08575 1304 aa18.46■□□□□ 0.55
SEC13-208ENST00000397109 ALDH1L1O75891 902 aa18.46■□□□□ 0.54
SEC13-208ENST00000397109 SSH1Q8WYL5 1049 aa18.46■□□□□ 0.54
SEC13-208ENST00000397109 ZNRF3Q9ULT6 936 aa18.46■□□□□ 0.54
SEC13-208ENST00000397109 C6orf229H3BNL8 230 aa18.45■□□□□ 0.54
SEC13-208ENST00000397109 GPSM2P81274 684 aa18.45■□□□□ 0.54
SEC13-208ENST00000397109 SLC4A10Q6U841 1118 aa18.45■□□□□ 0.54
SEC13-208ENST00000397109 EYA3Q99504 573 aa18.45■□□□□ 0.54
SEC13-208ENST00000397109 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
SEC13-208ENST00000397109 PODXL2Q9NZ53 605 aa18.45■□□□□ 0.54
SEC13-208ENST00000397109 SCN4AP35499 1836 aa18.44■□□□□ 0.54
SEC13-208ENST00000397109 WASHC4Q2M389 1173 aa18.44■□□□□ 0.54
SEC13-208ENST00000397109 GREM2Q9H772 168 aa18.44■□□□□ 0.54
SEC13-208ENST00000397109 HACL1Q9UJ83 578 aa18.44■□□□□ 0.54
SEC13-208ENST00000397109 GJA3Q9Y6H8 435 aa18.44■□□□□ 0.54
SEC13-208ENST00000397109 COL4A5P29400 1685 aa18.44■□□□□ 0.54
SEC13-208ENST00000397109 GRM8O00222 908 aa18.43■□□□□ 0.54
SEC13-208ENST00000397109 CSF1RP07333 972 aa18.43■□□□□ 0.54
SEC13-208ENST00000397109 TAF1DQ9H5J8 278 aaPredicted RBP18.43■□□□□ 0.54
SEC13-208ENST00000397109 BSDC1Q9NW68 430 aaPredicted RBP18.43■□□□□ 0.54
SEC13-208ENST00000397109 C9orf78Q9NZ63 289 aaPredicted RBP18.43■□□□□ 0.54
SEC13-208ENST00000397109 ANKIB1Q9P2G1 1089 aa18.43■□□□□ 0.54
SEC13-208ENST00000397109 POLLQ9UGP5 575 aa18.43■□□□□ 0.54
SEC13-208ENST00000397109 TBC1D16Q8TBP0 767 aa18.42■□□□□ 0.54
SEC13-208ENST00000397109 SMC4Q9NTJ3 1288 aa18.42■□□□□ 0.54
SEC13-208ENST00000397109 GGA1Q9UJY5 639 aa18.42■□□□□ 0.54
SEC13-208ENST00000397109 COL4A1P02462 1669 aa18.42■□□□□ 0.54
SEC13-208ENST00000397109 LMOD1P29536 600 aaPredicted RBP18.41■□□□□ 0.54
SEC13-208ENST00000397109 IGHMBP2P38935 993 aaKnown RBP18.41■□□□□ 0.54
SEC13-208ENST00000397109 APLP1P51693 650 aa18.41■□□□□ 0.54
SEC13-208ENST00000397109 TNIP1Q15025 636 aa18.41■□□□□ 0.54
SEC13-208ENST00000397109 GTF3C3Q9Y5Q9 886 aa18.41■□□□□ 0.54
SEC13-208ENST00000397109 DUOX1Q9NRD9 1551 aa18.41■□□□□ 0.54
SEC13-208ENST00000397109 XDHP47989 1333 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms