RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 CTSWP56202 376 aa37.08■■■■□ 3.53
CHCHD4-202ENST00000396914 CASP7P55210 303 aa37.07■■■■□ 3.52
CHCHD4-202ENST00000396914 TNNQ9UQP3 1299 aa37.07■■■■□ 3.52
CHCHD4-202ENST00000396914 PPEF1O14829 653 aaPredicted RBP37.05■■■■□ 3.52
CHCHD4-202ENST00000396914 FTSJ3Q8IY81 847 aaKnown RBP37.04■■■■□ 3.52
CHCHD4-202ENST00000396914 NBPF7P0C2Y1 421 aaPredicted RBP37.03■■■■□ 3.52
CHCHD4-202ENST00000396914 GRAPQ13588 217 aa37.03■■■■□ 3.52
CHCHD4-202ENST00000396914 GRAPLQ8TC17 118 aaPredicted RBP37.03■■■■□ 3.52
CHCHD4-202ENST00000396914 TMX4Q9H1E5 349 aaPredicted RBP37.03■■■■□ 3.52
CHCHD4-202ENST00000396914 SOGA3Q5TF21 947 aa37.02■■■■□ 3.52
CHCHD4-202ENST00000396914 TTLL11Q8NHH1 800 aa37.02■■■■□ 3.52
CHCHD4-202ENST00000396914 PLA2G12BQ9BX93 195 aa37.02■■■■□ 3.52
CHCHD4-202ENST00000396914 CHMP3Q9Y3E7 222 aa37.02■■■■□ 3.52
CHCHD4-202ENST00000396914 MYH3P11055 1940 aa37.01■■■■□ 3.52
CHCHD4-202ENST00000396914 SEC31BQ9NQW1 1179 aa37.01■■■■□ 3.51
CHCHD4-202ENST00000396914 BBOX1O75936 387 aa37■■■■□ 3.51
CHCHD4-202ENST00000396914 CCDC93Q567U6 631 aa37■■■■□ 3.51
CHCHD4-202ENST00000396914 INTS3Q68E01 1043 aaKnown RBP37■■■■□ 3.51
CHCHD4-202ENST00000396914 OLFM4Q6UX06 510 aa37■■■■□ 3.51
CHCHD4-202ENST00000396914 USP44Q9H0E7 712 aa37■■■■□ 3.51
CHCHD4-202ENST00000396914 TAF1P21675 1872 aa36.99■■■■□ 3.51
CHCHD4-202ENST00000396914 DZIP1LQ8IYY4 767 aaKnown RBP36.99■■■■□ 3.51
CHCHD4-202ENST00000396914 CELF1Q92879 486 aaKnown RBP36.99■■■■□ 3.51
CHCHD4-202ENST00000396914 GREM2Q9H772 168 aa36.99■■■■□ 3.51
CHCHD4-202ENST00000396914 C7orf43Q8WVR3 580 aa36.98■■■■□ 3.51
CHCHD4-202ENST00000396914 SUCLG2Q96I99 432 aa36.98■■■■□ 3.51
CHCHD4-202ENST00000396914 UTRNP46939 3433 aa36.98■■■■□ 3.51
CHCHD4-202ENST00000396914 UTYO14607 1347 aa36.97■■■■□ 3.51
CHCHD4-202ENST00000396914 FOXO4P98177 505 aa36.96■■■■□ 3.51
CHCHD4-202ENST00000396914 UBTFL1P0CB47 393 aaPredicted RBP36.95■■■■□ 3.51
CHCHD4-202ENST00000396914 RASSF7Q02833 373 aa36.95■■■■□ 3.51
CHCHD4-202ENST00000396914 TMEM57Q8N5G2 664 aa36.95■■■■□ 3.51
CHCHD4-202ENST00000396914 RPS8P62241 208 aaKnown RBP36.94■■■■□ 3.5
CHCHD4-202ENST00000396914 EPHA10Q5JZY3 1008 aa36.94■■■■□ 3.5
CHCHD4-202ENST00000396914 LMBR1LQ6UX01 489 aa36.94■■■■□ 3.5
CHCHD4-202ENST00000396914 CDC5LQ99459 802 aaKnown RBP36.94■■■■□ 3.5
CHCHD4-202ENST00000396914 ATP6V0A2Q9Y487 856 aa36.94■■■■□ 3.5
CHCHD4-202ENST00000396914 PLIN1O60240 522 aa36.93■■■■□ 3.5
CHCHD4-202ENST00000396914 FAM161AQ3B820 660 aa36.93■■■■□ 3.5
CHCHD4-202ENST00000396914 ANKRD18AQ8IVF6 992 aa36.93■■■■□ 3.5
CHCHD4-202ENST00000396914 RTKN2Q8IZC4 609 aa36.93■■■■□ 3.5
CHCHD4-202ENST00000396914 CSF1RP07333 972 aa36.93■■■■□ 3.5
CHCHD4-202ENST00000396914 CC2D2BQ6DHV5 1058 aa36.93■■■■□ 3.5
CHCHD4-202ENST00000396914 MS4A1P11836 297 aa36.92■■■■□ 3.5
CHCHD4-202ENST00000396914 ITGA6P23229 1130 aa36.92■■■■□ 3.5
CHCHD4-202ENST00000396914 TMC4Q7Z404 712 aa36.92■■■■□ 3.5
CHCHD4-202ENST00000396914 SLC51AQ86UW1 340 aa36.92■■■■□ 3.5
CHCHD4-202ENST00000396914 ITPRIPQ8IWB1 547 aa36.92■■■■□ 3.5
CHCHD4-202ENST00000396914 GOLGA6L2Q8N9W4 650 aaPredicted RBP36.92■■■■□ 3.5
CHCHD4-202ENST00000396914 TAOK3Q9H2K8 898 aa36.92■■■■□ 3.5
CHCHD4-202ENST00000396914 SP8Q8IXZ3 490 aa36.91■■■■□ 3.5
CHCHD4-202ENST00000396914 BICC1Q9H694 974 aaKnown RBP36.91■■■■□ 3.5
CHCHD4-202ENST00000396914 NFKBIEO00221 500 aa36.9■■■■□ 3.5
CHCHD4-202ENST00000396914 MEIS3Q99687 375 aa36.9■■■■□ 3.5
CHCHD4-202ENST00000396914 RTL9Q8NET4 1388 aa36.9■■■■□ 3.5
CHCHD4-202ENST00000396914 CHD4Q14839 1912 aa36.89■■■■□ 3.5
CHCHD4-202ENST00000396914 ANKRD18BA2A2Z9 1011 aa36.89■■■■□ 3.5
CHCHD4-202ENST00000396914 RLBP1P12271 317 aa36.89■■■■□ 3.5
CHCHD4-202ENST00000396914 IFIT5Q13325 482 aaKnown RBP36.89■■■■□ 3.5
CHCHD4-202ENST00000396914 PANK1Q8TE04 598 aa36.89■■■■□ 3.5
CHCHD4-202ENST00000396914 HDAC5Q9UQL6 1122 aa36.89■■■■□ 3.5
CHCHD4-202ENST00000396914 KAZALD1Q96I82 304 aa36.88■■■■□ 3.49
CHCHD4-202ENST00000396914 COL4A1P02462 1669 aa36.88■■■■□ 3.49
CHCHD4-202ENST00000396914 GNAI3P08754 354 aa36.87■■■■□ 3.49
CHCHD4-202ENST00000396914 IGHMBP2P38935 993 aaKnown RBP36.87■■■■□ 3.49
CHCHD4-202ENST00000396914 CCDC57Q2TAC2 916 aa36.87■■■■□ 3.49
CHCHD4-202ENST00000396914 TAF7LQ5H9L4 462 aa36.87■■■■□ 3.49
CHCHD4-202ENST00000396914 FER1L6Q2WGJ9 1857 aa36.86■■■■□ 3.49
CHCHD4-202ENST00000396914 FKBP4Q02790 459 aaKnown RBP eCLIP36.86■■■■□ 3.49
CHCHD4-202ENST00000396914 GRIPAP1Q4V328 841 aa36.85■■■■□ 3.49
CHCHD4-202ENST00000396914 RNF181Q9P0P0 153 aa36.85■■■■□ 3.49
CHCHD4-202ENST00000396914 C9orf131Q5VYM1 1079 aa36.85■■■■□ 3.49
CHCHD4-202ENST00000396914 DPP8Q6V1X1 898 aaPredicted RBP36.85■■■■□ 3.49
CHCHD4-202ENST00000396914 MPHOSPH8Q99549 860 aa36.85■■■■□ 3.49
CHCHD4-202ENST00000396914 LMNB1P20700 586 aa36.84■■■■□ 3.49
CHCHD4-202ENST00000396914 MPNDQ8N594 471 aa36.84■■■■□ 3.49
CHCHD4-202ENST00000396914 LRRFIP2Q9Y608 721 aaKnown RBP36.84■■■■□ 3.49
CHCHD4-202ENST00000396914 YY1P25490 414 aa36.83■■■■□ 3.49
CHCHD4-202ENST00000396914 NSFL1CQ9UNZ2 370 aaKnown RBP36.83■■■■□ 3.49
CHCHD4-202ENST00000396914 SPEF2Q9C093 1822 aa36.82■■■■□ 3.49
CHCHD4-202ENST00000396914 ANKRD44Q8N8A2 993 aa36.82■■■■□ 3.48
CHCHD4-202ENST00000396914 ZNF277Q9NRM2 450 aaPredicted RBP36.82■■■■□ 3.48
CHCHD4-202ENST00000396914 LTBP3Q9NS15 1303 aa36.82■■■■□ 3.48
CHCHD4-202ENST00000396914 RABL6Q3YEC7 729 aaPredicted RBP36.8■■■■□ 3.48
CHCHD4-202ENST00000396914 BSDC1Q9NW68 430 aaPredicted RBP36.8■■■■□ 3.48
CHCHD4-202ENST00000396914 ANKIB1Q9P2G1 1089 aa36.8■■■■□ 3.48
CHCHD4-202ENST00000396914 PSMD1Q99460 953 aa36.79■■■■□ 3.48
CHCHD4-202ENST00000396914 ZNF594Q96JF6 807 aaPredicted RBP36.78■■■■□ 3.48
CHCHD4-202ENST00000396914 PRELPP51888 382 aa36.77■■■■□ 3.48
CHCHD4-202ENST00000396914 GPSM2P81274 684 aa36.77■■■■□ 3.48
CHCHD4-202ENST00000396914 SBF1O95248 1867 aa36.77■■■■□ 3.48
CHCHD4-202ENST00000396914 CCDC88AQ3V6T2 1871 aa36.77■■■■□ 3.48
CHCHD4-202ENST00000396914 GNAI2P04899 355 aa36.76■■■■□ 3.48
CHCHD4-202ENST00000396914 SUPT20HQ8NEM7 779 aa36.76■■■■□ 3.48
CHCHD4-202ENST00000396914 COG6Q9Y2V7 657 aa36.76■■■■□ 3.48
CHCHD4-202ENST00000396914 LRRC37AA6NMS7 1700 aa36.76■■■■□ 3.48
CHCHD4-202ENST00000396914 SNED1Q8TER0 1413 aa36.75■■■■□ 3.47
CHCHD4-202ENST00000396914 C6orf229H3BNL8 230 aa36.75■■■■□ 3.47
CHCHD4-202ENST00000396914 CNNM1Q9NRU3 951 aa36.75■■■■□ 3.47
CHCHD4-202ENST00000396914 IARSP41252 1262 aaKnown RBP36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms