RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 EVI5LQ96CN4 794 aa28.31■■■□□ 2.12
CSNK1E-203ENST00000396832 SUCLG2Q96I99 432 aa28.31■■■□□ 2.12
CSNK1E-203ENST00000396832 BICC1Q9H694 974 aaKnown RBP28.31■■■□□ 2.12
CSNK1E-203ENST00000396832 JAK2O60674 1132 aa28.3■■■□□ 2.12
CSNK1E-203ENST00000396832 CCDC144BQ3MJ40 725 aa28.3■■■□□ 2.12
CSNK1E-203ENST00000396832 CCDC144CPQ8IYA2 1237 aa28.3■■■□□ 2.12
CSNK1E-203ENST00000396832 TDRD7Q8NHU6 1098 aaKnown RBP28.3■■■□□ 2.12
CSNK1E-203ENST00000396832 SPATA32Q96LK8 384 aa28.3■■■□□ 2.12
CSNK1E-203ENST00000396832 ELP1O95163 1332 aa28.3■■■□□ 2.12
CSNK1E-203ENST00000396832 SASH1O94885 1247 aa28.3■■■□□ 2.12
CSNK1E-203ENST00000396832 N4BP2Q86UW6 1770 aaPredicted RBP28.29■■■□□ 2.12
CSNK1E-203ENST00000396832 A0A087WWV3 80 aa28.29■■■□□ 2.12
CSNK1E-203ENST00000396832 KMT5BQ4FZB7 885 aa28.29■■■□□ 2.12
CSNK1E-203ENST00000396832 BLOC1S2Q6QNY1 142 aa28.29■■■□□ 2.12
CSNK1E-203ENST00000396832 LRRC2Q9BYS8 371 aa28.29■■■□□ 2.12
CSNK1E-203ENST00000396832 KCNA6P17658 529 aa28.29■■■□□ 2.12
CSNK1E-203ENST00000396832 BICD2Q8TD16 824 aa28.29■■■□□ 2.12
CSNK1E-203ENST00000396832 ZNF165P49910 485 aa28.28■■■□□ 2.12
CSNK1E-203ENST00000396832 ZNF397Q8NF99 534 aaPredicted RBP28.28■■■□□ 2.12
CSNK1E-203ENST00000396832 NR1I2O75469 434 aa28.28■■■□□ 2.12
CSNK1E-203ENST00000396832 DNAJC25Q9H1X3 360 aa28.27■■■□□ 2.12
CSNK1E-203ENST00000396832 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.27■■■□□ 2.12
CSNK1E-203ENST00000396832 ZNF215Q9UL58 517 aaPredicted RBP28.27■■■□□ 2.12
CSNK1E-203ENST00000396832 V9GYY5 206 aaPredicted RBP28.27■■■□□ 2.12
CSNK1E-203ENST00000396832 USP42Q9H9J4 1324 aaKnown RBP28.26■■■□□ 2.12
CSNK1E-203ENST00000396832 CEMIPQ8WUJ3 1361 aa28.26■■■□□ 2.12
CSNK1E-203ENST00000396832 G3BP1Q13283 466 aaKnown RBP eCLIP28.26■■■□□ 2.11
CSNK1E-203ENST00000396832 DDX19AQ9NUU7 478 aaKnown RBP28.26■■■□□ 2.11
CSNK1E-203ENST00000396832 PIP4K2AP48426 406 aaPredicted RBP28.26■■■□□ 2.11
CSNK1E-203ENST00000396832 MAP4K1Q92918 833 aa28.26■■■□□ 2.11
CSNK1E-203ENST00000396832 FBXW7Q969H0 707 aa28.26■■■□□ 2.11
CSNK1E-203ENST00000396832 DBF4Q9UBU7 674 aaPredicted RBP28.26■■■□□ 2.11
CSNK1E-203ENST00000396832 TOB2Q14106 344 aaPredicted RBP28.25■■■□□ 2.11
CSNK1E-203ENST00000396832 CCDC129Q6ZRS4 1044 aa28.25■■■□□ 2.11
CSNK1E-203ENST00000396832 CLSTN2Q9H4D0 955 aa28.25■■■□□ 2.11
CSNK1E-203ENST00000396832 USP27XA6NNY8 438 aa28.25■■■□□ 2.11
CSNK1E-203ENST00000396832 RBM43Q6ZSC3 357 aaKnown RBP28.25■■■□□ 2.11
CSNK1E-203ENST00000396832 KAZALD1Q96I82 304 aa28.25■■■□□ 2.11
CSNK1E-203ENST00000396832 TM6SF1Q9BZW5 370 aa28.25■■■□□ 2.11
CSNK1E-203ENST00000396832 CCDC66A2RUB6 948 aa28.24■■■□□ 2.11
CSNK1E-203ENST00000396832 LMOD2Q6P5Q4 547 aa28.24■■■□□ 2.11
CSNK1E-203ENST00000396832 LRRC8AQ8IWT6 810 aa28.24■■■□□ 2.11
CSNK1E-203ENST00000396832 SCAND2PQ9GZW5 306 aaPredicted RBP28.24■■■□□ 2.11
CSNK1E-203ENST00000396832 HSP90B1P14625 803 aaKnown RBP28.23■■■□□ 2.11
CSNK1E-203ENST00000396832 MYL6BP14649 208 aa28.23■■■□□ 2.11
CSNK1E-203ENST00000396832 PTPN14Q15678 1187 aa28.23■■■□□ 2.11
CSNK1E-203ENST00000396832 FTOQ9C0B1 505 aaKnown RBP eCLIP28.23■■■□□ 2.114e-9■■□□□ 11.5
CSNK1E-203ENST00000396832 ARID5BQ14865 1188 aa28.22■■■□□ 2.11
CSNK1E-203ENST00000396832 LEO1Q8WVC0 666 aaPredicted RBP28.22■■■□□ 2.11
CSNK1E-203ENST00000396832 BABAM1Q9NWV8 329 aa28.22■■■□□ 2.11
CSNK1E-203ENST00000396832 NPHP3Q7Z494 1330 aa28.22■■■□□ 2.11
CSNK1E-203ENST00000396832 RPS6KB1P23443 525 aa28.21■■■□□ 2.11
CSNK1E-203ENST00000396832 KSR2Q6VAB6 950 aa28.21■■■□□ 2.11
CSNK1E-203ENST00000396832 CRYBG1Q9Y4K1 1723 aa28.21■■■□□ 2.11
CSNK1E-203ENST00000396832 PDCP20941 246 aa28.21■■■□□ 2.11
CSNK1E-203ENST00000396832 CDC25BP30305 580 aa28.21■■■□□ 2.11
CSNK1E-203ENST00000396832 FBXO38Q6PIJ6 1188 aa28.21■■■□□ 2.11
CSNK1E-203ENST00000396832 SEC62Q99442 399 aaKnown RBP28.21■■■□□ 2.11
CSNK1E-203ENST00000396832 FAM53CQ9NYF3 392 aa28.21■■■□□ 2.11
CSNK1E-203ENST00000396832 GRM8O00222 908 aa28.2■■■□□ 2.11
CSNK1E-203ENST00000396832 PSMA5P28066 241 aa28.2■■■□□ 2.11
CSNK1E-203ENST00000396832 ERCC4Q92889 916 aaPredicted RBP28.2■■■□□ 2.11
CSNK1E-203ENST00000396832 PGBD1Q96JS3 809 aa28.2■■■□□ 2.11
CSNK1E-203ENST00000396832 RGPD2P0DJD1 1756 aa28.2■■■□□ 2.1
CSNK1E-203ENST00000396832 PDIA4P13667 645 aaKnown RBP28.2■■■□□ 2.1
CSNK1E-203ENST00000396832 MTX1Q13505 466 aa28.2■■■□□ 2.1
CSNK1E-203ENST00000396832 ERC1Q8IUD2 1116 aa28.2■■■□□ 2.1
CSNK1E-203ENST00000396832 RBM6P78332 1123 aaKnown RBP28.19■■■□□ 2.1
CSNK1E-203ENST00000396832 ELF2Q15723 593 aa28.19■■■□□ 2.1
CSNK1E-203ENST00000396832 SLC39A6Q13433 755 aa28.19■■■□□ 2.1
CSNK1E-203ENST00000396832 SLFNL1Q499Z3 407 aa28.19■■■□□ 2.1
CSNK1E-203ENST00000396832 NYAP1Q6ZVC0 841 aa28.19■■■□□ 2.1
CSNK1E-203ENST00000396832 KCNB2Q92953 911 aa28.19■■■□□ 2.1
CSNK1E-203ENST00000396832 BRF1Q92994 677 aa28.19■■■□□ 2.1
CSNK1E-203ENST00000396832 DNAJC2Q99543 621 aaKnown RBP28.19■■■□□ 2.1
CSNK1E-203ENST00000396832 GIGYF1O75420 1035 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-203ENST00000396832 IRX5P78411 483 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-203ENST00000396832 NAP1L2Q9ULW6 460 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-203ENST00000396832 PXDNQ92626 1479 aa28.18■■■□□ 2.1
CSNK1E-203ENST00000396832 NPHP4O75161 1426 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-203ENST00000396832 MARF1Q9Y4F3 1742 aaKnown RBP28.18■■■□□ 2.1
CSNK1E-203ENST00000396832 SKILP12757 684 aa28.18■■■□□ 2.1
CSNK1E-203ENST00000396832 C1orf141Q5JVX7 400 aa28.18■■■□□ 2.1
CSNK1E-203ENST00000396832 LTN1O94822 1766 aa28.18■■■□□ 2.1
CSNK1E-203ENST00000396832 ERICH4A6NGS2 130 aa28.17■■■□□ 2.1
CSNK1E-203ENST00000396832 RNF20Q5VTR2 975 aa28.17■■■□□ 2.1
CSNK1E-203ENST00000396832 ERO1AQ96HE7 468 aa28.17■■■□□ 2.1
CSNK1E-203ENST00000396832 GOLGA6L19H0YKK7 550 aa28.17■■■□□ 2.1
CSNK1E-203ENST00000396832 IP6K1Q92551 441 aa28.17■■■□□ 2.1
CSNK1E-203ENST00000396832 TRMT1Q9NXH9 659 aaKnown RBP28.17■■■□□ 2.1
CSNK1E-203ENST00000396832 NEMFO60524 1076 aa28.16■■■□□ 2.1
CSNK1E-203ENST00000396832 TIGD1Q96MW7 591 aa28.16■■■□□ 2.1
CSNK1E-203ENST00000396832 H3BQV1 296 aa28.16■■■□□ 2.1
CSNK1E-203ENST00000396832 EPHA10Q5JZY3 1008 aa28.16■■■□□ 2.1
CSNK1E-203ENST00000396832 IFFO2Q5TF58 517 aa28.16■■■□□ 2.1
CSNK1E-203ENST00000396832 ST7Q9NRC1 585 aa28.16■■■□□ 2.1
CSNK1E-203ENST00000396832 RIC3Q7Z5B4 369 aa28.16■■■□□ 2.1
CSNK1E-203ENST00000396832 RNMTO43148 476 aaKnown RBP28.15■■■□□ 2.1
CSNK1E-203ENST00000396832 CDK11BP21127 795 aaKnown RBP28.15■■■□□ 2.1
CSNK1E-203ENST00000396832 AKAP4Q5JQC9 854 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms