RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 UBE2HP62256 183 aa18.02■□□□□ 0.48
GNE-202ENST00000396594 MCMDC2Q4G0Z9 681 aa18.02■□□□□ 0.48
GNE-202ENST00000396594 HOOK3Q86VS8 718 aa18.02■□□□□ 0.48
GNE-202ENST00000396594 PPP1R1BQ9UD71 204 aaPredicted RBP18.02■□□□□ 0.48
GNE-202ENST00000396594 C6orf229H3BNL8 230 aa18.02■□□□□ 0.48
GNE-202ENST00000396594 NEBLO76041 1014 aa18.02■□□□□ 0.48
GNE-202ENST00000396594 PTPRKQ15262 1439 aa18.02■□□□□ 0.47
GNE-202ENST00000396594 TSPY2A6NKD2 308 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 USP8P40818 1118 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 CNNM3Q8NE01 707 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 ALS2CR12Q96Q35 445 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 MYO5CQ9NQX4 1742 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 EIF4A2Q14240 407 aaKnown RBP18.01■□□□□ 0.47
GNE-202ENST00000396594 STX6O43752 255 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 WTAPQ15007 396 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 NBPF14Q5TI25 921 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 CACNA2D4Q7Z3S7 1137 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 ZSCAN30Q86W11 494 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 THUMPD2Q9BTF0 503 aaKnown RBP18.01■□□□□ 0.47
GNE-202ENST00000396594 KDM5DQ9BY66 1539 aa18.01■□□□□ 0.47
GNE-202ENST00000396594 TOP1P11387 765 aaKnown RBP18■□□□□ 0.47
GNE-202ENST00000396594 PRPHP41219 470 aa18■□□□□ 0.47
GNE-202ENST00000396594 UBE3BQ7Z3V4 1068 aa18■□□□□ 0.47
GNE-202ENST00000396594 USHBP1Q8N6Y0 703 aa18■□□□□ 0.47
GNE-202ENST00000396594 PLVAPQ9BX97 442 aa18■□□□□ 0.47
GNE-202ENST00000396594 RBM28Q9NW13 759 aaKnown RBP18■□□□□ 0.47
GNE-202ENST00000396594 ADAMTS2O95450 1211 aa18■□□□□ 0.47
GNE-202ENST00000396594 PPP2R5BQ15173 497 aa18■□□□□ 0.47
GNE-202ENST00000396594 USP16Q9Y5T5 823 aa18■□□□□ 0.47
GNE-202ENST00000396594 PZPP20742 1482 aa18■□□□□ 0.47
GNE-202ENST00000396594 CEBPAP49715 358 aaPredicted RBP18■□□□□ 0.47
GNE-202ENST00000396594 CCDC91Q7Z6B0 441 aa18■□□□□ 0.47
GNE-202ENST00000396594 CCDC8Q9H0W5 538 aaPredicted RBP18■□□□□ 0.47
GNE-202ENST00000396594 TTC12Q9H892 705 aaPredicted RBP18■□□□□ 0.47
GNE-202ENST00000396594 KIAA0754O94854 1291 aa18■□□□□ 0.47
GNE-202ENST00000396594 CCDC102BQ68D86 513 aa18■□□□□ 0.47
GNE-202ENST00000396594 LRRC45Q96CN5 670 aa18■□□□□ 0.47
GNE-202ENST00000396594 ZBTB3Q9H5J0 574 aa17.99■□□□□ 0.47
GNE-202ENST00000396594 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
GNE-202ENST00000396594 AXDND1Q5T1B0 1012 aaPredicted RBP17.99■□□□□ 0.47
GNE-202ENST00000396594 APBB1IPQ7Z5R6 666 aaPredicted RBP17.99■□□□□ 0.47
GNE-202ENST00000396594 FILIP1Q7Z7B0 1213 aa17.99■□□□□ 0.47
GNE-202ENST00000396594 TBC1D32Q96NH3 1257 aa17.99■□□□□ 0.47
GNE-202ENST00000396594 POLKQ9UBT6 870 aa17.99■□□□□ 0.47
GNE-202ENST00000396594 NF2P35240 595 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 FERMT2Q96AC1 680 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.98■□□□□ 0.47
GNE-202ENST00000396594 H0YHG0 523 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 PAFAH1B1P43034 410 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 TBC1D9Q6ZT07 1266 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 HELLSQ9NRZ9 838 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 FEZ1Q99689 392 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 ORC3Q9UBD5 711 aaPredicted RBP17.98■□□□□ 0.47
GNE-202ENST00000396594 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 NEFHP12036 1026 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 POLD1P28340 1107 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 UBA7P41226 1012 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 KIF18AQ8NI77 898 aa17.98■□□□□ 0.47
GNE-202ENST00000396594 RTCBQ9Y3I0 505 aaKnown RBP17.97■□□□□ 0.47
GNE-202ENST00000396594 ZBTB43O43298 467 aa17.97■□□□□ 0.47
GNE-202ENST00000396594 OGFOD1Q8N543 542 aa17.97■□□□□ 0.47
GNE-202ENST00000396594 DDX21Q9NR30 783 aaKnown RBP eCLIP17.97■□□□□ 0.47
GNE-202ENST00000396594 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
GNE-202ENST00000396594 TNNI2P48788 182 aa17.97■□□□□ 0.47
GNE-202ENST00000396594 XAGE3Q8WTP9 111 aa17.97■□□□□ 0.47
GNE-202ENST00000396594 INTS4Q96HW7 963 aaKnown RBP17.97■□□□□ 0.47
GNE-202ENST00000396594 DENND2AQ9ULE3 1009 aa17.97■□□□□ 0.47
GNE-202ENST00000396594 F6X3S4 739 aa17.96■□□□□ 0.47
GNE-202ENST00000396594 RBM17Q96I25 401 aaKnown RBP17.96■□□□□ 0.47
GNE-202ENST00000396594 A0A1W2PP64 1363 aa17.96■□□□□ 0.47
GNE-202ENST00000396594 BRAPQ7Z569 592 aa17.96■□□□□ 0.47
GNE-202ENST00000396594 UBXN4Q92575 508 aa17.96■□□□□ 0.47
GNE-202ENST00000396594 GCOM1H8Y6P7 765 aaPredicted RBP17.96■□□□□ 0.47
GNE-202ENST00000396594 MYZAPP0CAP1 466 aa17.96■□□□□ 0.47
GNE-202ENST00000396594 SUPT20HQ8NEM7 779 aa17.96■□□□□ 0.47
GNE-202ENST00000396594 KIAA0232Q92628 1395 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 PDE1AP54750 535 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 NAA16Q6N069 864 aaPredicted RBP17.95■□□□□ 0.46
GNE-202ENST00000396594 DCTPP1Q9H773 170 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 C6orf50Q9HD87 102 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 ANKRD62A6NC57 917 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 FSIP1Q8NA03 581 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 FAM107BQ9H098 131 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 TBCAO75347 108 aaKnown RBP17.95■□□□□ 0.46
GNE-202ENST00000396594 KLHL40Q2TBA0 621 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 RNMTO43148 476 aaKnown RBP17.95■□□□□ 0.46
GNE-202ENST00000396594 HOXC9P31274 260 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 PTPN14Q15678 1187 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
GNE-202ENST00000396594 ESYT1Q9BSJ8 1104 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 CHPF2Q9P2E5 772 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 RNF113AO15541 343 aaKnown RBP17.94■□□□□ 0.46
GNE-202ENST00000396594 GJB2P29033 226 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 RTN1Q16799 776 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 TTLL5Q6EMB2 1281 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 PNMA2Q9UL42 364 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 PARP3Q9Y6F1 533 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 KDM5AP29375 1690 aaKnown RBP17.94■□□□□ 0.46
GNE-202ENST00000396594 TESK2Q96S53 571 aa17.94■□□□□ 0.46
GNE-202ENST00000396594 SMARCA5O60264 1052 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms