RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 CREB3L3Q68CJ9 461 aa15.82■□□□□ 0.12
TRIM40-207ENST00000396581 ANKRD7Q92527 254 aa15.82■□□□□ 0.12
TRIM40-207ENST00000396581 RBM8AQ9Y5S9 174 aaKnown RBP15.82■□□□□ 0.12
TRIM40-207ENST00000396581 COL22A1Q8NFW1 1626 aaPredicted RBP15.82■□□□□ 0.12
TRIM40-207ENST00000396581 TSC1Q92574 1164 aa15.82■□□□□ 0.12
TRIM40-207ENST00000396581 IL2RBP14784 551 aa15.81■□□□□ 0.12
TRIM40-207ENST00000396581 ZSCAN20P17040 1043 aaPredicted RBP15.81■□□□□ 0.12
TRIM40-207ENST00000396581 EIF2S2P20042 333 aaKnown RBP15.81■□□□□ 0.12
TRIM40-207ENST00000396581 PSMA5P28066 241 aa15.81■□□□□ 0.12
TRIM40-207ENST00000396581 TYRO3Q06418 890 aa15.81■□□□□ 0.12
TRIM40-207ENST00000396581 LARP1BQ659C4 914 aaKnown RBP15.81■□□□□ 0.12
TRIM40-207ENST00000396581 NUP62CLQ9H1M0 184 aa15.81■□□□□ 0.12
TRIM40-207ENST00000396581 STRN4Q9NRL3 753 aa15.81■□□□□ 0.12
TRIM40-207ENST00000396581 HDAC5Q9UQL6 1122 aa15.81■□□□□ 0.12
TRIM40-207ENST00000396581 SIPA1L3O60292 1781 aaPredicted RBP15.81■□□□□ 0.12
TRIM40-207ENST00000396581 VPS37CA5D8V6 355 aaPredicted RBP15.8■□□□□ 0.12
TRIM40-207ENST00000396581 GIGYF1O75420 1035 aaPredicted RBP15.8■□□□□ 0.12
TRIM40-207ENST00000396581 DMTNQ08495 405 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 ANKRD1Q15327 319 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 TSGA10IPQ3SY00 556 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 CDC37L1Q7L3B6 337 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 NFATC2IPQ8NCF5 419 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 ZCRB1Q8TBF4 217 aaKnown RBP15.8■□□□□ 0.12
TRIM40-207ENST00000396581 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 UTYO14607 1347 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 SLC27A2O14975 620 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 LIG1P18858 919 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 SCAND2PQ9GZW5 306 aaPredicted RBP15.8■□□□□ 0.12
TRIM40-207ENST00000396581 SCN11AQ9UI33 1791 aa15.8■□□□□ 0.12
TRIM40-207ENST00000396581 MED23Q9ULK4 1368 aa15.79■□□□□ 0.12
TRIM40-207ENST00000396581 PCDH11XQ9BZA7 1347 aa15.79■□□□□ 0.12
TRIM40-207ENST00000396581 PCDH11YQ9BZA8 1340 aa15.79■□□□□ 0.12
TRIM40-207ENST00000396581 RIOK3O14730 519 aaKnown RBP15.79■□□□□ 0.12
TRIM40-207ENST00000396581 IFIT2P09913 472 aaKnown RBP15.79■□□□□ 0.12
TRIM40-207ENST00000396581 CHAF1AQ13111 956 aaPredicted RBP15.79■□□□□ 0.12
TRIM40-207ENST00000396581 OS9Q13438 667 aaPredicted RBP15.79■□□□□ 0.12
TRIM40-207ENST00000396581 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
TRIM40-207ENST00000396581 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.79■□□□□ 0.12
TRIM40-207ENST00000396581 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
TRIM40-207ENST00000396581 DDX19AQ9NUU7 478 aaKnown RBP15.79■□□□□ 0.12
TRIM40-207ENST00000396581 MRC1P22897 1456 aa15.79■□□□□ 0.12
TRIM40-207ENST00000396581 NKX1-1Q15270 411 aaPredicted RBP15.79■□□□□ 0.12
TRIM40-207ENST00000396581 SYCP1Q15431 976 aa15.79■□□□□ 0.12
TRIM40-207ENST00000396581 PLA2G4DQ86XP0 818 aa15.79■□□□□ 0.12
TRIM40-207ENST00000396581 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
TRIM40-207ENST00000396581 PLCB2Q00722 1185 aa15.78■□□□□ 0.12
TRIM40-207ENST00000396581 TDRD7Q8NHU6 1098 aaKnown RBP15.78■□□□□ 0.12
TRIM40-207ENST00000396581 PARP4Q9UKK3 1724 aaKnown RBP15.78■□□□□ 0.12
TRIM40-207ENST00000396581 NMIQ13287 307 aaPredicted RBP15.77■□□□□ 0.12
TRIM40-207ENST00000396581 SPC24Q8NBT2 197 aa15.77■□□□□ 0.12
TRIM40-207ENST00000396581 FAM227BQ96M60 508 aa15.77■□□□□ 0.12
TRIM40-207ENST00000396581 CLSTN2Q9H4D0 955 aa15.77■□□□□ 0.12
TRIM40-207ENST00000396581 COL16A1Q07092 1604 aaPredicted RBP15.77■□□□□ 0.12
TRIM40-207ENST00000396581 SASH1O94885 1247 aa15.77■□□□□ 0.11
TRIM40-207ENST00000396581 RPS6KB1P23443 525 aa15.77■□□□□ 0.11
TRIM40-207ENST00000396581 TOB2Q14106 344 aaPredicted RBP15.77■□□□□ 0.11
TRIM40-207ENST00000396581 TPRNQ4KMQ1 711 aa15.77■□□□□ 0.11
TRIM40-207ENST00000396581 KSR2Q6VAB6 950 aa15.77■□□□□ 0.11
TRIM40-207ENST00000396581 AACSQ86V21 672 aa15.77■□□□□ 0.11
TRIM40-207ENST00000396581 CBX8Q9HC52 389 aa15.77■□□□□ 0.11
TRIM40-207ENST00000396581 HMG20BQ9P0W2 317 aa15.77■□□□□ 0.11
TRIM40-207ENST00000396581 COL14A1Q05707 1796 aaKnown RBP15.77■□□□□ 0.11
TRIM40-207ENST00000396581 PTGS1P23219 599 aa15.76■□□□□ 0.11
TRIM40-207ENST00000396581 COL9A3Q14050 684 aaPredicted RBP15.76■□□□□ 0.11
TRIM40-207ENST00000396581 ATP2B3Q16720 1220 aa15.76■□□□□ 0.11
TRIM40-207ENST00000396581 PPP4R3BQ5MIZ7 849 aa15.76■□□□□ 0.11
TRIM40-207ENST00000396581 RNF20Q5VTR2 975 aa15.76■□□□□ 0.11
TRIM40-207ENST00000396581 BLOC1S2Q6QNY1 142 aa15.76■□□□□ 0.11
TRIM40-207ENST00000396581 LUZP1Q86V48 1076 aa15.76■□□□□ 0.11
TRIM40-207ENST00000396581 LEO1Q8WVC0 666 aaPredicted RBP15.76■□□□□ 0.11
TRIM40-207ENST00000396581 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
TRIM40-207ENST00000396581 DACT1Q9NYF0 836 aa15.76■□□□□ 0.11
TRIM40-207ENST00000396581 PA2G4Q9UQ80 394 aaKnown RBP15.76■□□□□ 0.11
TRIM40-207ENST00000396581 CAVIN2O95810 425 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 EAF2Q96CJ1 260 aaPredicted RBP15.75■□□□□ 0.11
TRIM40-207ENST00000396581 ARID3AQ99856 593 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 GTPBP4Q9BZE4 634 aaKnown RBP15.75■□□□□ 0.11
TRIM40-207ENST00000396581 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 ZNF75DP51815 510 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 SLC39A6Q13433 755 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 ANO6Q4KMQ2 910 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 USPL1Q5W0Q7 1092 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 PDCL2Q8N4E4 241 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 KAZALD1Q96I82 304 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
TRIM40-207ENST00000396581 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
TRIM40-207ENST00000396581 ERVV-2B6SEH9 535 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 DTNBO60941 627 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 ANXA1P04083 346 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 CABP4P57796 275 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 PIP4K2BP78356 416 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 SPATA32Q96LK8 384 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.74■□□□□ 0.11
TRIM40-207ENST00000396581 A0A0D9SFI3 127 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 CDC25BP30305 580 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 CAMK4Q16566 473 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 FAM173BQ6P4H8 233 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 CCDC186Q7Z3E2 898 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 FERMT3Q86UX7 667 aa15.74■□□□□ 0.11
TRIM40-207ENST00000396581 LINS1Q8NG48 757 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms