RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 KCNG4Q8TDN1 519 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 GSTA5Q7RTV2 222 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 BICD1Q96G01 975 aa15.93■□□□□ 0.14
COL4A3-202ENST00000396578 MMRN2Q9H8L6 949 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 STIM2Q9P246 746 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 PANK2Q9BZ23 570 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 CFAP58Q5T655 872 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 MFSD6Q6ZSS7 791 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 MICU3Q86XE3 530 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 SELENOSQ9BQE4 189 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 KAT14Q9H8E8 782 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 SLU7O95391 586 aaKnown RBP15.92■□□□□ 0.14
COL4A3-202ENST00000396578 ZSCAN22P10073 491 aaPredicted RBP15.92■□□□□ 0.14
COL4A3-202ENST00000396578 MCM10Q7L590 875 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 SLC26A6Q9BXS9 759 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 VPS18Q9P253 973 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 CLCN1P35523 988 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 BMP2KLQ5H9B9 411 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 NEK1Q96PY6 1258 aa15.92■□□□□ 0.14
COL4A3-202ENST00000396578 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
COL4A3-202ENST00000396578 CPLX4Q7Z7G2 160 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 LMBR1Q8WVP7 490 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 SPAG5Q96R06 1193 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 ORC3Q9UBD5 711 aaPredicted RBP15.91■□□□□ 0.14
COL4A3-202ENST00000396578 NCOA7Q8NI08 942 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 SYT1P21579 422 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 KRT83P78385 493 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 ZNF830Q96NB3 372 aaPredicted RBP15.91■□□□□ 0.14
COL4A3-202ENST00000396578 PRDM11Q9NQV5 511 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 KRT86O43790 486 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 WDHD1O75717 1129 aaPredicted RBP15.91■□□□□ 0.14
COL4A3-202ENST00000396578 BMP15O95972 392 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 NBPF11Q86T75 865 aa15.91■□□□□ 0.14
COL4A3-202ENST00000396578 TPD52P55327 224 aaPredicted RBP15.9■□□□□ 0.14
COL4A3-202ENST00000396578 CCDC114Q96M63 670 aa15.9■□□□□ 0.14
COL4A3-202ENST00000396578 DAPK1P53355 1430 aa15.9■□□□□ 0.14
COL4A3-202ENST00000396578 ERMNQ8TAM6 284 aa15.9■□□□□ 0.14
COL4A3-202ENST00000396578 ATAD2BQ9ULI0 1458 aa15.9■□□□□ 0.14
COL4A3-202ENST00000396578 KIF5AQ12840 1032 aa15.9■□□□□ 0.14
COL4A3-202ENST00000396578 CPSF2Q9P2I0 782 aaKnown RBP15.9■□□□□ 0.14
COL4A3-202ENST00000396578 RRAGBQ5VZM2 374 aa15.9■□□□□ 0.14
COL4A3-202ENST00000396578 FAM135AQ9P2D6 1515 aa15.9■□□□□ 0.14
COL4A3-202ENST00000396578 MAP3K9P80192 1104 aa15.9■□□□□ 0.14
COL4A3-202ENST00000396578 CCDC94Q9BW85 323 aaPredicted RBP15.9■□□□□ 0.14
COL4A3-202ENST00000396578 SPAG1Q07617 926 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 ZEB2O60315 1214 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 ZFYP08048 801 aaPredicted RBP15.89■□□□□ 0.13
COL4A3-202ENST00000396578 GBP6Q6ZN66 633 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 TBC1D32Q96NH3 1257 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 CWC25Q9NXE8 425 aaPredicted RBP15.89■□□□□ 0.13
COL4A3-202ENST00000396578 SAMD15Q9P1V8 674 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 MKRN1Q9UHC7 482 aaKnown RBP15.89■□□□□ 0.13
COL4A3-202ENST00000396578 PTGS1P23219 599 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 FAM200AQ8TCP9 573 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 NBPF7P0C2Y1 421 aaPredicted RBP15.89■□□□□ 0.13
COL4A3-202ENST00000396578 TMOD3Q9NYL9 352 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 ODF2LQ9ULJ1 636 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 JAKMIP2Q96AA8 810 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 TIAM1Q13009 1591 aa15.89■□□□□ 0.13
COL4A3-202ENST00000396578 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
COL4A3-202ENST00000396578 NDC80O14777 642 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 CLGNO14967 610 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 AFMP43652 599 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 KCNH5Q8NCM2 988 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 TSGA10Q9BZW7 698 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 SETDB1Q15047 1291 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 KIF3CO14782 793 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 LACTBP83111 547 aaPredicted RBP15.88■□□□□ 0.13
COL4A3-202ENST00000396578 ECHDC1Q9NTX5 307 aa15.88■□□□□ 0.13
COL4A3-202ENST00000396578 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
COL4A3-202ENST00000396578 ATP2A2P16615 1042 aaKnown RBP15.87■□□□□ 0.13
COL4A3-202ENST00000396578 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 CCDC110Q8TBZ0 833 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 VAT1LQ9HCJ6 419 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 PSMA7O14818 248 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 ATP11AP98196 1134 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 WDR78Q5VTH9 848 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 OSCARQ8IYS5 282 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 AMOTQ4VCS5 1084 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 TRIM7Q9C029 511 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 SLC52A1Q9NWF4 448 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 CCDC141Q6ZP82 1450 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 BAG3O95817 575 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 FAM76AQ8TAV0 307 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 MPHOSPH6Q99547 160 aaKnown RBP15.87■□□□□ 0.13
COL4A3-202ENST00000396578 TXNDC16Q9P2K2 825 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 CNPY2Q9Y2B0 182 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 TUBBP07437 444 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 AOPEPQ8N6M6 819 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 TTC16Q8NEE8 873 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 RPGRQ92834 1020 aaKnown RBP15.87■□□□□ 0.13
COL4A3-202ENST00000396578 STMN2Q93045 179 aa15.87■□□□□ 0.13
COL4A3-202ENST00000396578 TTC22Q5TAA0 569 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 HDXQ7Z353 690 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 ALDH3A1P30838 453 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 VAV2P52735 878 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 ZNF354CQ86Y25 554 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 NUTM2BA6NNL0 878 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms