RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
LDHC-202ENST00000396215 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
LDHC-202ENST00000396215 TNIP1Q15025 636 aa13□□□□□ -0.33
LDHC-202ENST00000396215 HABP4Q5JVS0 413 aaKnown RBP13□□□□□ -0.33
LDHC-202ENST00000396215 USP48Q86UV5 1035 aa13□□□□□ -0.33
LDHC-202ENST00000396215 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
LDHC-202ENST00000396215 CSRNP1Q96S65 589 aa13□□□□□ -0.33
LDHC-202ENST00000396215 GBA2Q9HCG7 927 aaPredicted RBP13□□□□□ -0.33
LDHC-202ENST00000396215 NUP98P52948 1817 aa12.99□□□□□ -0.33
LDHC-202ENST00000396215 HTTP42858 3142 aa12.99□□□□□ -0.33
LDHC-202ENST00000396215 SLC10A3P09131 477 aa12.99□□□□□ -0.33
LDHC-202ENST00000396215 KIAA2012Q0VF49 1180 aa12.99□□□□□ -0.33
LDHC-202ENST00000396215 SLC51AQ86UW1 340 aa12.99□□□□□ -0.33
LDHC-202ENST00000396215 C2orf69Q8N8R5 385 aa12.99□□□□□ -0.33
LDHC-202ENST00000396215 DPF2Q92785 391 aa12.99□□□□□ -0.33
LDHC-202ENST00000396215 CNOT7Q9UIV1 285 aaKnown RBP12.99□□□□□ -0.33
LDHC-202ENST00000396215 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
LDHC-202ENST00000396215 H7C1D1 291 aa12.98□□□□□ -0.33
LDHC-202ENST00000396215 ZNF157P51786 506 aaPredicted RBP12.98□□□□□ -0.33
LDHC-202ENST00000396215 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
LDHC-202ENST00000396215 CENPFP49454 3210 aa12.98□□□□□ -0.33
LDHC-202ENST00000396215 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
LDHC-202ENST00000396215 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
LDHC-202ENST00000396215 NOM1Q5C9Z4 860 aaKnown RBP12.97□□□□□ -0.33
LDHC-202ENST00000396215 TMX4Q9H1E5 349 aaPredicted RBP12.97□□□□□ -0.33
LDHC-202ENST00000396215 SZT2Q5T011 3432 aa12.97□□□□□ -0.33
LDHC-202ENST00000396215 BRCA2P51587 3418 aa12.96□□□□□ -0.33
LDHC-202ENST00000396215 MAP3K15Q6ZN16 1313 aa12.96□□□□□ -0.33
LDHC-202ENST00000396215 UBN2Q6ZU65 1347 aa12.96□□□□□ -0.33
LDHC-202ENST00000396215 RAD17O75943 681 aa12.96□□□□□ -0.33
LDHC-202ENST00000396215 SLC10A5Q5PT55 438 aa12.96□□□□□ -0.33
LDHC-202ENST00000396215 SUSD4Q5VX71 490 aa12.96□□□□□ -0.33
LDHC-202ENST00000396215 DLK2Q6UY11 383 aa12.96□□□□□ -0.33
LDHC-202ENST00000396215 KRT26Q7Z3Y9 468 aa12.96□□□□□ -0.33
LDHC-202ENST00000396215 SP8Q8IXZ3 490 aa12.96□□□□□ -0.33
LDHC-202ENST00000396215 SHTN1A0MZ66 631 aa12.95□□□□□ -0.34
LDHC-202ENST00000396215 YDJCA8MPS7 323 aa12.95□□□□□ -0.34
LDHC-202ENST00000396215 BBOX1O75936 387 aa12.95□□□□□ -0.34
LDHC-202ENST00000396215 NTSR2O95665 410 aa12.95□□□□□ -0.34
LDHC-202ENST00000396215 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
LDHC-202ENST00000396215 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
LDHC-202ENST00000396215 ZNF34Q8IZ26 560 aa12.95□□□□□ -0.34
LDHC-202ENST00000396215 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
LDHC-202ENST00000396215 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
LDHC-202ENST00000396215 DPP8Q6V1X1 898 aaPredicted RBP12.94□□□□□ -0.34
LDHC-202ENST00000396215 MPNDQ8N594 471 aa12.94□□□□□ -0.34
LDHC-202ENST00000396215 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
LDHC-202ENST00000396215 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
LDHC-202ENST00000396215 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
LDHC-202ENST00000396215 ABCC4O15439 1325 aa12.93□□□□□ -0.34
LDHC-202ENST00000396215 FBXO46Q6PJ61 603 aaPredicted RBP12.93□□□□□ -0.34
LDHC-202ENST00000396215 SAMD7Q7Z3H4 446 aa12.93□□□□□ -0.34
LDHC-202ENST00000396215 ZNF296Q8WUU4 475 aaPredicted RBP12.93□□□□□ -0.34
LDHC-202ENST00000396215 A0A0C4DFX4 3053 aa12.92□□□□□ -0.34
LDHC-202ENST00000396215 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
LDHC-202ENST00000396215 HSPA5P11021 654 aaKnown RBP12.92□□□□□ -0.34
LDHC-202ENST00000396215 RPS12P25398 132 aaKnown RBP12.92□□□□□ -0.34
LDHC-202ENST00000396215 FXR1P51114 621 aaKnown RBP eCLIP12.92□□□□□ -0.34
LDHC-202ENST00000396215 FKBP1BP68106 108 aa12.92□□□□□ -0.34
LDHC-202ENST00000396215 PARP10Q53GL7 1025 aa12.92□□□□□ -0.34
LDHC-202ENST00000396215 PPP1R42Q7Z4L9 355 aa12.92□□□□□ -0.34
LDHC-202ENST00000396215 RASAL3Q86YV0 1011 aa12.92□□□□□ -0.34
LDHC-202ENST00000396215 DCPSQ96C86 337 aaKnown RBP12.92□□□□□ -0.34
LDHC-202ENST00000396215 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
LDHC-202ENST00000396215 U2SURPO15042 1029 aaKnown RBP12.91□□□□□ -0.34
LDHC-202ENST00000396215 HTATSF1O43719 755 aaKnown RBP12.91□□□□□ -0.34
LDHC-202ENST00000396215 EGFRP00533 1210 aa12.91□□□□□ -0.34
LDHC-202ENST00000396215 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
LDHC-202ENST00000396215 GPTP24298 496 aa12.91□□□□□ -0.34
LDHC-202ENST00000396215 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
LDHC-202ENST00000396215 KIF6Q6ZMV9 814 aa12.91□□□□□ -0.34
LDHC-202ENST00000396215 TTLL7Q6ZT98 887 aa12.91□□□□□ -0.34
LDHC-202ENST00000396215 CFHR5Q9BXR6 569 aa12.91□□□□□ -0.34
LDHC-202ENST00000396215 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
LDHC-202ENST00000396215 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
LDHC-202ENST00000396215 ANKRD36CQ5JPF3 1778 aa12.91□□□□□ -0.34
LDHC-202ENST00000396215 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.34
LDHC-202ENST00000396215 PSMD14O00487 310 aa12.9□□□□□ -0.34
LDHC-202ENST00000396215 TBC1D10BQ4KMP7 808 aaPredicted RBP12.9□□□□□ -0.34
LDHC-202ENST00000396215 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
LDHC-202ENST00000396215 PRKAR2BP31323 418 aa12.89□□□□□ -0.35
LDHC-202ENST00000396215 TM4SF4P48230 202 aa12.89□□□□□ -0.35
LDHC-202ENST00000396215 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
LDHC-202ENST00000396215 MCM10Q7L590 875 aa12.89□□□□□ -0.35
LDHC-202ENST00000396215 TMC4Q7Z404 712 aa12.89□□□□□ -0.35
LDHC-202ENST00000396215 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
LDHC-202ENST00000396215 GPR25O00155 361 aa12.88□□□□□ -0.35
LDHC-202ENST00000396215 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
LDHC-202ENST00000396215 SULF1Q8IWU6 871 aa12.88□□□□□ -0.35
LDHC-202ENST00000396215 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
LDHC-202ENST00000396215 CDCA5Q96FF9 252 aa12.88□□□□□ -0.35
LDHC-202ENST00000396215 UTP14AQ9BVJ6 771 aaKnown RBP12.88□□□□□ -0.35
LDHC-202ENST00000396215 PAPPA2Q9BXP8 1791 aa12.88□□□□□ -0.35
LDHC-202ENST00000396215 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
LDHC-202ENST00000396215 LAMB2P55268 1798 aa12.87□□□□□ -0.35
LDHC-202ENST00000396215 TBC1D8O95759 1140 aa12.87□□□□□ -0.35
LDHC-202ENST00000396215 GRAPQ13588 217 aa12.87□□□□□ -0.35
LDHC-202ENST00000396215 GRAPLQ8TC17 118 aaPredicted RBP12.87□□□□□ -0.35
LDHC-202ENST00000396215 ZBTB3Q9H5J0 574 aa12.87□□□□□ -0.35
LDHC-202ENST00000396215 ZNF609O15014 1411 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms