RNA–Protein interactions for RNA: ENST00000396175.5

TRAK1-203, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-203ENST00000396175 HSPA4P34932 840 aa16.66■□□□□ 0.26
TRAK1-203ENST00000396175 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRAK1-203ENST00000396175 KLF18A0A0U1RQI7 1052 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 MATR3P43243 847 aaKnown RBP eCLIP16.65■□□□□ 0.263e-8■■■■■ 29.8
TRAK1-203ENST00000396175 SYT10Q6XYQ8 523 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 TCP11L1Q9NUJ3 509 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 UBA7P41226 1012 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 GABPB1Q06547 395 aaPredicted RBP16.65■□□□□ 0.26
TRAK1-203ENST00000396175 RANBP6O60518 1105 aaKnown RBP16.65■□□□□ 0.26
TRAK1-203ENST00000396175 STARD3NLO95772 234 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 USP5P45974 858 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 CEP85Q6P2H3 762 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
TRAK1-203ENST00000396175 NOS1P29475 1434 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 PRAG1Q86YV5 1406 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 TMCO5BA8MYB1 307 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 EBAG9O00559 213 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 ZNF76P36508 570 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 RTL1A6NKG5 1358 aa16.65■□□□□ 0.26
TRAK1-203ENST00000396175 SSR1P43307 286 aaKnown RBP16.64■□□□□ 0.26
TRAK1-203ENST00000396175 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.26
TRAK1-203ENST00000396175 KIF14Q15058 1648 aa16.64■□□□□ 0.25
TRAK1-203ENST00000396175 TRIM21P19474 475 aaKnown RBP16.64■□□□□ 0.25
TRAK1-203ENST00000396175 HAND2P61296 217 aa16.64■□□□□ 0.25
TRAK1-203ENST00000396175 TTF1Q15361 905 aaPredicted RBP16.64■□□□□ 0.25
TRAK1-203ENST00000396175 PPFIA3O75145 1194 aa16.64■□□□□ 0.25
TRAK1-203ENST00000396175 VAMP4O75379 141 aa16.64■□□□□ 0.25
TRAK1-203ENST00000396175 SLC26A6Q9BXS9 759 aa16.64■□□□□ 0.25
TRAK1-203ENST00000396175 SPTLC2O15270 562 aa16.64■□□□□ 0.25
TRAK1-203ENST00000396175 RAPGEF3O95398 923 aa16.64■□□□□ 0.25
TRAK1-203ENST00000396175 TESK2Q96S53 571 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 TTC41PQ6P2S7 1318 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 NF2P35240 595 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 TRIM47Q96LD4 638 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
TRAK1-203ENST00000396175 CHMLP26374 656 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 Q6ZUG5 572 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 NBPF11Q86T75 865 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 ALG1Q9BT22 464 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 RASSF4Q9H2L5 321 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 RIOK3O14730 519 aaKnown RBP16.63■□□□□ 0.25
TRAK1-203ENST00000396175 CCDC40Q4G0X9 1142 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 PLB1Q6P1J6 1458 aa16.63■□□□□ 0.25
TRAK1-203ENST00000396175 IFI16Q16666 785 aaKnown RBP16.62■□□□□ 0.25
TRAK1-203ENST00000396175 IFNKQ9P0W0 207 aa16.62■□□□□ 0.25
TRAK1-203ENST00000396175 CALML4Q96GE6 196 aa16.62■□□□□ 0.25
TRAK1-203ENST00000396175 TTC31Q49AM3 519 aaPredicted RBP16.62■□□□□ 0.25
TRAK1-203ENST00000396175 MICALL1Q8N3F8 863 aa16.62■□□□□ 0.25
TRAK1-203ENST00000396175 VPS18Q9P253 973 aa16.62■□□□□ 0.25
TRAK1-203ENST00000396175 ZFYP08048 801 aaPredicted RBP16.62■□□□□ 0.25
TRAK1-203ENST00000396175 NOP2P46087 812 aaKnown RBP16.62■□□□□ 0.25
TRAK1-203ENST00000396175 ATL3Q6DD88 541 aa16.62■□□□□ 0.25
TRAK1-203ENST00000396175 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
TRAK1-203ENST00000396175 SLC5A1P13866 664 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 USHBP1Q8N6Y0 703 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 MCMDC2Q4G0Z9 681 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 RRAGBQ5VZM2 374 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 CCDC144CPQ8IYA2 1237 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 IDEP14735 1019 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 CAVIN4Q5BKX8 364 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 TACC1O75410 805 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 WWC2Q6AWC2 1192 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
TRAK1-203ENST00000396175 ATRIPQ8WXE1 791 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
TRAK1-203ENST00000396175 ZBTB43O43298 467 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 ALDH1L1O75891 902 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 DESP17661 470 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 KRT83P78385 493 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 HSP90AA4PQ58FG1 418 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 RAB11FIP4Q86YS3 637 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 KIF5BP33176 963 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 CCDC96Q2M329 555 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 MFSD6Q6ZSS7 791 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 SNRKQ9NRH2 765 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 KRT86O43790 486 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
TRAK1-203ENST00000396175 INSRP06213 1382 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 MYO1BO43795 1136 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 HDXQ7Z353 690 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 GTF3C6Q969F1 213 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 ANKRD18BA2A2Z9 1011 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 ZBTB7BO15156 539 aaPredicted RBP16.59■□□□□ 0.25
TRAK1-203ENST00000396175 PTCD1O75127 700 aaKnown RBP16.59■□□□□ 0.25
TRAK1-203ENST00000396175 U2AF2P26368 475 aaKnown RBP eCLIP16.59■□□□□ 0.255e-8■■■■□ 26.7
TRAK1-203ENST00000396175 MARCKSP29966 332 aaPredicted RBP16.59■□□□□ 0.25
TRAK1-203ENST00000396175 C10orf67Q8IYJ2 551 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 UBA5Q9GZZ9 404 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 EVCP57679 992 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 CREB3L3Q68CJ9 461 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 LMBRD1Q9NUN5 540 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 ZC3H6P61129 1189 aaKnown RBP16.59■□□□□ 0.25
TRAK1-203ENST00000396175 RUFY3Q7L099 469 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 OTUD6BQ8N6M0 293 aa16.59■□□□□ 0.25
TRAK1-203ENST00000396175 NBPF7P0C2Y1 421 aaPredicted RBP16.58■□□□□ 0.25
TRAK1-203ENST00000396175 AFMP43652 599 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms