RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 ZNF526Q8TF50 670 aaPredicted RBP12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 RBM17Q96I25 401 aaKnown RBP12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 API5Q9BZZ5 524 aaKnown RBP12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 COL4A1P02462 1669 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 LAMB2P55268 1798 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 KLRG2A4D1S0 409 aaPredicted RBP12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 USP44Q9H0E7 712 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 IPO8O15397 1037 aaKnown RBP12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 ALDH1B1P30837 517 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 CTSWP56202 376 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 LMBR1LQ6UX01 489 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 TTLL11Q8NHH1 800 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 SUCLG2Q96I99 432 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 MEIS3Q99687 375 aa12.74□□□□□ -0.37
THUMPD1-202ENST00000396083 IBTKQ9P2D0 1353 aaPredicted RBP12.73□□□□□ -0.37
THUMPD1-202ENST00000396083 ITPRIPQ8IWB1 547 aa12.73□□□□□ -0.37
THUMPD1-202ENST00000396083 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
THUMPD1-202ENST00000396083 CASP7P55210 303 aa12.73□□□□□ -0.37
THUMPD1-202ENST00000396083 C20orf194Q5TEA3 1177 aa12.73□□□□□ -0.37
THUMPD1-202ENST00000396083 ZNF594Q96JF6 807 aaPredicted RBP12.73□□□□□ -0.37
THUMPD1-202ENST00000396083 CCDC152Q4G0S7 254 aa12.72□□□□□ -0.37
THUMPD1-202ENST00000396083 BICC1Q9H694 974 aaKnown RBP12.72□□□□□ -0.37
THUMPD1-202ENST00000396083 C1orf115Q9H7X2 142 aa12.72□□□□□ -0.37
THUMPD1-202ENST00000396083 ALDH1L1O75891 902 aa12.72□□□□□ -0.37
THUMPD1-202ENST00000396083 KLHDC4Q8TBB5 520 aa12.72□□□□□ -0.37
THUMPD1-202ENST00000396083 KAZALD1Q96I82 304 aa12.72□□□□□ -0.37
THUMPD1-202ENST00000396083 GPR101Q96P66 508 aaPredicted RBP12.72□□□□□ -0.37
THUMPD1-202ENST00000396083 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
THUMPD1-202ENST00000396083 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
THUMPD1-202ENST00000396083 RNF123Q5XPI4 1314 aa12.71□□□□□ -0.37
THUMPD1-202ENST00000396083 WTIPA6NIX2 430 aaPredicted RBP12.71□□□□□ -0.37
THUMPD1-202ENST00000396083 NFKBIEO00221 500 aa12.71□□□□□ -0.37
THUMPD1-202ENST00000396083 ITGA6P23229 1130 aa12.71□□□□□ -0.37
THUMPD1-202ENST00000396083 CCDC88AQ3V6T2 1871 aa12.71□□□□□ -0.37
THUMPD1-202ENST00000396083 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 YY1P25490 414 aa12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 HOXA10P31260 410 aaPredicted RBP12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 CCT4P50991 539 aaKnown RBP12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 PRELPP51888 382 aa12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 GRAPQ13588 217 aa12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 SF3B3Q15393 1217 aaKnown RBP12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 GRAPLQ8TC17 118 aaPredicted RBP12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 RNF181Q9P0P0 153 aa12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 COG6Q9Y2V7 657 aa12.71□□□□□ -0.38
THUMPD1-202ENST00000396083 MYH3P11055 1940 aa12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 CDHR2Q9BYE9 1310 aa12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 UBTFL1P0CB47 393 aaPredicted RBP12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 BRPF1P55201 1214 aaPredicted RBP12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 RPS8P62241 208 aaKnown RBP12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 FOXO4P98177 505 aa12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 LRRFIP2Q9Y608 721 aaKnown RBP12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 SNAP23O00161 211 aa12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 NEFLP07196 543 aa12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 CRAMP1Q96RY5 1269 aa12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 PDZRN3Q9UPQ7 1066 aa12.7□□□□□ -0.38
THUMPD1-202ENST00000396083 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
THUMPD1-202ENST00000396083 ARHGAP45Q92619 1136 aa12.69□□□□□ -0.38
THUMPD1-202ENST00000396083 TMX4Q9H1E5 349 aaPredicted RBP12.69□□□□□ -0.38
THUMPD1-202ENST00000396083 TAOK3Q9H2K8 898 aa12.69□□□□□ -0.38
THUMPD1-202ENST00000396083 CCDC93Q567U6 631 aa12.69□□□□□ -0.38
THUMPD1-202ENST00000396083 TAF7LQ5H9L4 462 aa12.69□□□□□ -0.38
THUMPD1-202ENST00000396083 ANKRD18AQ8IVF6 992 aa12.69□□□□□ -0.38
THUMPD1-202ENST00000396083 ANKIB1Q9P2G1 1089 aa12.69□□□□□ -0.38
THUMPD1-202ENST00000396083 CHD4Q14839 1912 aa12.68□□□□□ -0.38
THUMPD1-202ENST00000396083 SPEF2Q9C093 1822 aa12.68□□□□□ -0.38
THUMPD1-202ENST00000396083 ARFGEF1Q9Y6D6 1849 aa12.68□□□□□ -0.38
THUMPD1-202ENST00000396083 HSP90B1P14625 803 aaKnown RBP12.68□□□□□ -0.38
THUMPD1-202ENST00000396083 IFIT5Q13325 482 aaKnown RBP12.68□□□□□ -0.38
THUMPD1-202ENST00000396083 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
THUMPD1-202ENST00000396083 CCDC57Q2TAC2 916 aa12.68□□□□□ -0.38
THUMPD1-202ENST00000396083 MPHOSPH8Q99549 860 aa12.68□□□□□ -0.38
THUMPD1-202ENST00000396083 SIL1Q9H173 461 aa12.68□□□□□ -0.38
THUMPD1-202ENST00000396083 C6orf229H3BNL8 230 aa12.67□□□□□ -0.38
THUMPD1-202ENST00000396083 BBOX1O75936 387 aa12.67□□□□□ -0.38
THUMPD1-202ENST00000396083 INTS3Q68E01 1043 aaKnown RBP12.67□□□□□ -0.38
THUMPD1-202ENST00000396083 DPP8Q6V1X1 898 aaPredicted RBP12.67□□□□□ -0.38
THUMPD1-202ENST00000396083 ATP6V0A2Q9Y487 856 aa12.67□□□□□ -0.38
THUMPD1-202ENST00000396083 TAF5LO75529 589 aa12.67□□□□□ -0.38
THUMPD1-202ENST00000396083 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
THUMPD1-202ENST00000396083 ANKRD18BA2A2Z9 1011 aa12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 AOC3Q16853 763 aa12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 MPNDQ8N594 471 aa12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 RIC1Q4ADV7 1423 aa12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 CSF1RP07333 972 aa12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 IGHMBP2P38935 993 aaKnown RBP12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 IRX6P78412 446 aaPredicted RBP12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 GPSM2P81274 684 aa12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 ANKRD44Q8N8A2 993 aa12.66□□□□□ -0.38
THUMPD1-202ENST00000396083 LDHAL6AQ6ZMR3 332 aa12.65□□□□□ -0.38
THUMPD1-202ENST00000396083 PLA2G12BQ9BX93 195 aa12.65□□□□□ -0.38
THUMPD1-202ENST00000396083 PA2G4Q9UQ80 394 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms