RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 CACTINQ8WUQ7 758 aaKnown RBP10.25□□□□□ -0.77
BDNF-204ENST00000395980 DDX41Q9UJV9 622 aaKnown RBP10.25□□□□□ -0.77
BDNF-204ENST00000395980 LMTK3Q96Q04 1460 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 A0A0D9SFI3 127 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 G3BP1Q13283 466 aaKnown RBP eCLIP10.25□□□□□ -0.77
BDNF-204ENST00000395980 HEG1Q9ULI3 1381 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 MYH15Q9Y2K3 1946 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 NR1I2O75469 434 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 IQCB1Q15051 598 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 STX1AQ16623 288 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 TPD52L1Q16890 204 aaPredicted RBP10.24□□□□□ -0.77
BDNF-204ENST00000395980 ATL3Q6DD88 541 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 LINS1Q8NG48 757 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 DNAJC25Q9H1X3 360 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 NRBP1Q9UHY1 535 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 MAP3K2Q9Y2U5 619 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 SASH1O94885 1247 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 AKAP4Q5JQC9 854 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 EAF2Q96CJ1 260 aaPredicted RBP10.24□□□□□ -0.77
BDNF-204ENST00000395980 LLPHQ9BRT6 129 aaKnown RBP10.24□□□□□ -0.77
BDNF-204ENST00000395980 FSD1Q9BTV5 496 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 TFIP11Q9UBB9 837 aaKnown RBP10.24□□□□□ -0.77
BDNF-204ENST00000395980 EID1Q9Y6B2 187 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 GOLGA6L19H0YKK7 550 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 KIF2AO00139 706 aaPredicted RBP10.24□□□□□ -0.77
BDNF-204ENST00000395980 TEFQ10587 303 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 IP6K1Q92551 441 aa10.24□□□□□ -0.77
BDNF-204ENST00000395980 PA2G4Q9UQ80 394 aaKnown RBP10.24□□□□□ -0.77
BDNF-204ENST00000395980 MORC2Q9Y6X9 1032 aaPredicted RBP10.24□□□□□ -0.77
BDNF-204ENST00000395980 CEP135Q66GS9 1140 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 LRRC8AQ8IWT6 810 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 NFAT5O94916 1531 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 GRM8O00222 908 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 NAA16Q6N069 864 aaPredicted RBP10.23□□□□□ -0.77
BDNF-204ENST00000395980 NYAP1Q6ZVC0 841 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 DDX54Q8TDD1 881 aaKnown RBP10.23□□□□□ -0.77
BDNF-204ENST00000395980 BTBD11A6QL63 1104 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 TAF5LO75529 589 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 SLFNL1Q499Z3 407 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 ZNF397Q8NF99 534 aaPredicted RBP10.23□□□□□ -0.77
BDNF-204ENST00000395980 BRF1Q92994 677 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 FAM193AP78312 1265 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 CCDC144BQ3MJ40 725 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 CCDC144CPQ8IYA2 1237 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 SMARCC2Q8TAQ2 1214 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 LGR6Q9HBX8 967 aa10.23□□□□□ -0.77
BDNF-204ENST00000395980 DHX8Q14562 1220 aaKnown RBP10.22□□□□□ -0.77
BDNF-204ENST00000395980 LTV1Q96GA3 475 aaPredicted RBP10.22□□□□□ -0.77
BDNF-204ENST00000395980 RCOR1Q9UKL0 485 aa10.22□□□□□ -0.77
BDNF-204ENST00000395980 U3KPZ7 1027 aaPredicted RBP10.22□□□□□ -0.77
BDNF-204ENST00000395980 DDX58O95786 925 aaKnown RBP10.22□□□□□ -0.77
BDNF-204ENST00000395980 NEK1Q96PY6 1258 aa10.22□□□□□ -0.77
BDNF-204ENST00000395980 H3BQV1 296 aa10.22□□□□□ -0.77
BDNF-204ENST00000395980 AMOTQ4VCS5 1084 aa10.22□□□□□ -0.77
BDNF-204ENST00000395980 PLEKHO1Q53GL0 409 aaPredicted RBP10.22□□□□□ -0.77
BDNF-204ENST00000395980 IFFO2Q5TF58 517 aa10.22□□□□□ -0.77
BDNF-204ENST00000395980 NUTM2GQ5VZR2 741 aa10.22□□□□□ -0.77
BDNF-204ENST00000395980 KIF18AQ8NI77 898 aa10.22□□□□□ -0.77
BDNF-204ENST00000395980 SUCLG2Q96I99 432 aa10.22□□□□□ -0.77
BDNF-204ENST00000395980 SLC26A8Q96RN1 970 aa10.22□□□□□ -0.77
BDNF-204ENST00000395980 KCNQ3O43525 872 aa10.21□□□□□ -0.77
BDNF-204ENST00000395980 GSDMDP57764 484 aa10.21□□□□□ -0.77
BDNF-204ENST00000395980 PTPN14Q15678 1187 aa10.21□□□□□ -0.77
BDNF-204ENST00000395980 TICAM2Q86XR7 235 aa10.21□□□□□ -0.77
BDNF-204ENST00000395980 ABTB2Q8N961 1025 aa10.21□□□□□ -0.77
BDNF-204ENST00000395980 ERO1AQ96HE7 468 aa10.21□□□□□ -0.77
BDNF-204ENST00000395980 KAZALD1Q96I82 304 aa10.21□□□□□ -0.77
BDNF-204ENST00000395980 ANO10Q9NW15 660 aa10.21□□□□□ -0.77
BDNF-204ENST00000395980 DTNBO60941 627 aa10.21□□□□□ -0.78
BDNF-204ENST00000395980 ANXA1P04083 346 aa10.21□□□□□ -0.78
BDNF-204ENST00000395980 COL9A3Q14050 684 aaPredicted RBP10.21□□□□□ -0.78
BDNF-204ENST00000395980 CREBRFQ8IUR6 639 aa10.21□□□□□ -0.78
BDNF-204ENST00000395980 USHBP1Q8N6Y0 703 aa10.21□□□□□ -0.78
BDNF-204ENST00000395980 SIPA1L3O60292 1781 aaPredicted RBP10.21□□□□□ -0.78
BDNF-204ENST00000395980 ZNF589Q86UQ0 364 aaPredicted RBP10.21□□□□□ -0.78
BDNF-204ENST00000395980 CHMP4CQ96CF2 233 aa10.21□□□□□ -0.78
BDNF-204ENST00000395980 TCEANC2Q96MN5 208 aa10.21□□□□□ -0.78
BDNF-204ENST00000395980 CCDC8Q9H0W5 538 aaPredicted RBP10.21□□□□□ -0.78
BDNF-204ENST00000395980 BOLA2Q9H3K6 86 aa10.21□□□□□ -0.78
BDNF-204ENST00000395980 BICC1Q9H694 974 aaKnown RBP10.21□□□□□ -0.78
BDNF-204ENST00000395980 JAK2O60674 1132 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 PFKFB2O60825 505 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 ATP5JP18859 108 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 ZNF530Q6P9A1 599 aaPredicted RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 CCDC73Q6ZRK6 1079 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 FAM53CQ9NYF3 392 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 TAF6LQ9Y6J9 622 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 RNMTO43148 476 aaKnown RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 TUBB4AP04350 444 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 ADD1P35611 737 aaKnown RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 KCNJ6P48051 423 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 C11orf57Q6ZUT1 292 aaPredicted RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 KRT222Q8N1A0 295 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 ZNF396Q96N95 335 aaPredicted RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 IMPACTQ9P2X3 320 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 ADAMTS7Q9UKP4 1686 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 BECN2A8MW95 431 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms