RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RACK1P63244 317 aaKnown RBP7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 PTPN12Q05209 780 aaKnown RBP7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 SCARF1Q14162 830 aa7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 SF3A1Q15459 793 aaKnown RBP7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 ZNF394Q53GI3 561 aa7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 GALNT12Q8IXK2 581 aa7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 ABI2Q9NYB9 513 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 DDX41Q9UJV9 622 aaKnown RBP7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 HCN2Q9UL51 889 aa7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 PCDHGB7Q9Y5F8 929 aa7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 USP31Q70CQ4 1352 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 F11P03951 625 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 CYP2E1P05181 493 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 EPB42P16452 691 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 NXPE4Q6UWF7 544 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 NLRP13Q86W25 1043 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 NLRP8Q86W28 1048 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 ZFP42Q96MM3 310 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 BCO2Q9BYV7 579 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 SRA1Q9HD15 236 aaKnown RBP7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 BRD7Q9NPI1 651 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 NLRP2Q9NX02 1062 aa7.87□□□□□ -1.15
HMGB1P10-201ENST00000395823 EFSO43281 561 aa7.86□□□□□ -1.15
HMGB1P10-201ENST00000395823 USP17L7P0C7H9 530 aa7.86□□□□□ -1.15
HMGB1P10-201ENST00000395823 SMCPP49901 116 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P10-201ENST00000395823 KCNQ4P56696 695 aa7.86□□□□□ -1.15
HMGB1P10-201ENST00000395823 GRM2Q14416 872 aa7.86□□□□□ -1.15
HMGB1P10-201ENST00000395823 UBXN4Q92575 508 aa7.86□□□□□ -1.15
HMGB1P10-201ENST00000395823 LATS2Q9NRM7 1088 aa7.86□□□□□ -1.15
HMGB1P10-201ENST00000395823 FAM8A1Q9UBU6 413 aa7.86□□□□□ -1.15
HMGB1P10-201ENST00000395823 GJA3Q9Y6H8 435 aa7.86□□□□□ -1.15
HMGB1P10-201ENST00000395823 POTECB2RU33 542 aa7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 SFSWAPQ12872 951 aaKnown RBP7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 UBAP2LQ14157 1087 aaKnown RBP7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 PEAR1Q5VY43 1037 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 SLC43A3Q8NBI5 491 aa7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 GLIS3Q8NEA6 775 aa7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 SUV39H2Q9H5I1 410 aa7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 CAPN10Q9HC96 672 aa7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 C11orf16Q9NQ32 467 aa7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 PPP1R1BQ9UD71 204 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P10-201ENST00000395823 SASH3O75995 380 aa7.84□□□□□ -1.15
HMGB1P10-201ENST00000395823 GRIN2CQ14957 1233 aa7.84□□□□□ -1.15
HMGB1P10-201ENST00000395823 TAF1CQ15572 869 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P10-201ENST00000395823 C3orf58Q8NDZ4 430 aa7.84□□□□□ -1.15
HMGB1P10-201ENST00000395823 GAS2L1Q99501 681 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P10-201ENST00000395823 KANSL3Q9P2N6 904 aa7.84□□□□□ -1.15
HMGB1P10-201ENST00000395823 A0A1W2PP55 124 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 GADD45BO75293 160 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 FAM157BP0CG42 384 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 CES1P23141 567 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 ST13P50502 369 aaKnown RBP7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 ERMP1Q7Z2K6 904 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 USP48Q86UV5 1035 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 GSX2Q9BZM3 304 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 SRCIN1Q9C0H9 1055 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 COPRSQ9NQ92 184 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 STRN4Q9NRL3 753 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 ZFATQ9P243 1243 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 KCNH4Q9UQ05 1017 aa7.83□□□□□ -1.16
HMGB1P10-201ENST00000395823 MMP20O60882 483 aa7.82□□□□□ -1.16
HMGB1P10-201ENST00000395823 CTC1Q2NKJ3 1217 aa7.82□□□□□ -1.16
HMGB1P10-201ENST00000395823 KIAA0319Q5VV43 1072 aa7.82□□□□□ -1.16
HMGB1P10-201ENST00000395823 HS2ST1Q7LGA3 356 aa7.82□□□□□ -1.16
HMGB1P10-201ENST00000395823 ZNF654Q8IZM8 581 aa7.82□□□□□ -1.16
HMGB1P10-201ENST00000395823 PGBD3Q8N328 593 aa7.82□□□□□ -1.16
HMGB1P10-201ENST00000395823 TANGO6Q9C0B7 1094 aa7.82□□□□□ -1.16
HMGB1P10-201ENST00000395823 GGT7Q9UJ14 662 aa7.82□□□□□ -1.16
HMGB1P10-201ENST00000395823 SOBPA7XYQ1 873 aa7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 TARSP26639 723 aaKnown RBP7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 MAP3K10Q02779 954 aa7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 TTC39BQ5VTQ0 682 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 KRT25Q7Z3Z0 450 aa7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 CRIPAKQ8N1N5 446 aa7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 OR13H1Q8NG92 308 aa7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 GMLQ99445 158 aa7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 PRKAG2Q9UGJ0 569 aa7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 SALL4Q9UJQ4 1053 aa7.81□□□□□ -1.16
HMGB1P10-201ENST00000395823 DCDC2BA2VCK2 349 aa7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 ATXN7O15265 892 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 TNP2Q05952 138 aa7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 CCINQ13939 588 aa7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 LBRQ14739 615 aaKnown RBP7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 EFHC2Q5JST6 749 aa7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 COL13A1Q5TAT6 717 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 CNTNAP3BQ96NU0 1288 aa7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 CNTNAP3Q9BZ76 1288 aa7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 NDFIP2Q9NV92 336 aa7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 CUEDC1Q9NWM3 386 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 INPP5FQ9Y2H2 1132 aa7.8□□□□□ -1.16
HMGB1P10-201ENST00000395823 AXIN1O15169 862 aa7.79□□□□□ -1.16
HMGB1P10-201ENST00000395823 ACPPP15309 386 aa7.79□□□□□ -1.16
HMGB1P10-201ENST00000395823 PRPF40BQ6NWY9 871 aaKnown RBP7.79□□□□□ -1.16
HMGB1P10-201ENST00000395823 DHX38Q92620 1227 aaKnown RBP7.79□□□□□ -1.16
HMGB1P10-201ENST00000395823 PMEPA1Q969W9 287 aa7.79□□□□□ -1.16
HMGB1P10-201ENST00000395823 TCF12Q99081 682 aa7.79□□□□□ -1.16
HMGB1P10-201ENST00000395823 EHD4Q9H223 541 aa7.79□□□□□ -1.16
HMGB1P10-201ENST00000395823 PCDHGC4Q9Y5F7 938 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms