RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PPEF1O14829 653 aaPredicted RBP20.94■□□□□ 0.94
CXCL1-201ENST00000395761 CTSWP56202 376 aa20.94■□□□□ 0.94
CXCL1-201ENST00000395761 TTLL11Q8NHH1 800 aa20.94■□□□□ 0.94
CXCL1-201ENST00000395761 CELF1Q92879 486 aaKnown RBP20.94■□□□□ 0.94
CXCL1-201ENST00000395761 PLA2G12BQ9BX93 195 aa20.94■□□□□ 0.94
CXCL1-201ENST00000395761 C9orf78Q9NZ63 289 aaPredicted RBP20.94■□□□□ 0.94
CXCL1-201ENST00000395761 COL4A1P02462 1669 aa20.93■□□□□ 0.94
CXCL1-201ENST00000395761 BBOX1O75936 387 aa20.93■□□□□ 0.94
CXCL1-201ENST00000395761 NBPF7P0C2Y1 421 aaPredicted RBP20.93■□□□□ 0.94
CXCL1-201ENST00000395761 TRIM27P14373 513 aa20.93■□□□□ 0.94
CXCL1-201ENST00000395761 PRELPP51888 382 aa20.93■□□□□ 0.94
CXCL1-201ENST00000395761 GRAPQ13588 217 aa20.93■□□□□ 0.94
CXCL1-201ENST00000395761 CCDC152Q4G0S7 254 aa20.93■□□□□ 0.94
CXCL1-201ENST00000395761 GRAPLQ8TC17 118 aaPredicted RBP20.93■□□□□ 0.94
CXCL1-201ENST00000395761 TAF1P21675 1872 aa20.92■□□□□ 0.94
CXCL1-201ENST00000395761 IPO8O15397 1037 aaKnown RBP20.92■□□□□ 0.94
CXCL1-201ENST00000395761 YY1P25490 414 aa20.92■□□□□ 0.94
CXCL1-201ENST00000395761 FOXO4P98177 505 aa20.92■□□□□ 0.94
CXCL1-201ENST00000395761 CCDC93Q567U6 631 aa20.92■□□□□ 0.94
CXCL1-201ENST00000395761 EPHA10Q5JZY3 1008 aa20.92■□□□□ 0.94
CXCL1-201ENST00000395761 SOGA3Q5TF21 947 aa20.92■□□□□ 0.94
CXCL1-201ENST00000395761 CCT4P50991 539 aaKnown RBP20.91■□□□□ 0.94
CXCL1-201ENST00000395761 ATF7IPQ6VMQ6 1270 aa20.91■□□□□ 0.94
CXCL1-201ENST00000395761 USP44Q9H0E7 712 aa20.91■□□□□ 0.94
CXCL1-201ENST00000395761 GREM2Q9H772 168 aa20.91■□□□□ 0.94
CXCL1-201ENST00000395761 ATP6V0A2Q9Y487 856 aa20.91■□□□□ 0.94
CXCL1-201ENST00000395761 UTYO14607 1347 aa20.9■□□□□ 0.94
CXCL1-201ENST00000395761 CSF1RP07333 972 aa20.9■□□□□ 0.94
CXCL1-201ENST00000395761 C9orf131Q5VYM1 1079 aa20.9■□□□□ 0.94
CXCL1-201ENST00000395761 ZKSCAN2Q63HK3 967 aa20.9■□□□□ 0.94
CXCL1-201ENST00000395761 CLUAP1Q96AJ1 413 aa20.9■□□□□ 0.94
CXCL1-201ENST00000395761 CHD4Q14839 1912 aa20.9■□□□□ 0.94
CXCL1-201ENST00000395761 RPS8P62241 208 aaKnown RBP20.89■□□□□ 0.93
CXCL1-201ENST00000395761 SP8Q8IXZ3 490 aa20.89■□□□□ 0.93
CXCL1-201ENST00000395761 RTKN2Q8IZC4 609 aa20.89■□□□□ 0.93
CXCL1-201ENST00000395761 KAZALD1Q96I82 304 aa20.89■□□□□ 0.93
CXCL1-201ENST00000395761 SUCLG2Q96I99 432 aa20.89■□□□□ 0.93
CXCL1-201ENST00000395761 TAOK3Q9H2K8 898 aa20.89■□□□□ 0.93
CXCL1-201ENST00000395761 SNED1Q8TER0 1413 aa20.88■□□□□ 0.93
CXCL1-201ENST00000395761 INTS3Q68E01 1043 aaKnown RBP20.88■□□□□ 0.93
CXCL1-201ENST00000395761 CC2D2BQ6DHV5 1058 aa20.88■□□□□ 0.93
CXCL1-201ENST00000395761 RCAN3Q9UKA8 241 aa20.88■□□□□ 0.93
CXCL1-201ENST00000395761 FER1L6Q2WGJ9 1857 aa20.88■□□□□ 0.93
CXCL1-201ENST00000395761 FAM161AQ3B820 660 aa20.87■□□□□ 0.93
CXCL1-201ENST00000395761 RNF181Q9P0P0 153 aa20.87■□□□□ 0.93
CXCL1-201ENST00000395761 LTBP3Q9NS15 1303 aa20.86■□□□□ 0.93
CXCL1-201ENST00000395761 LMNB1P20700 586 aa20.86■□□□□ 0.93
CXCL1-201ENST00000395761 FKBP4Q02790 459 aaKnown RBP eCLIP20.86■□□□□ 0.93
CXCL1-201ENST00000395761 LMBR1LQ6UX01 489 aa20.86■□□□□ 0.93
CXCL1-201ENST00000395761 RTL9Q8NET4 1388 aa20.85■□□□□ 0.93
CXCL1-201ENST00000395761 ITGA6P23229 1130 aa20.85■□□□□ 0.93
CXCL1-201ENST00000395761 TMC4Q7Z404 712 aa20.85■□□□□ 0.93
CXCL1-201ENST00000395761 TMX4Q9H1E5 349 aaPredicted RBP20.85■□□□□ 0.93
CXCL1-201ENST00000395761 ZNF277Q9NRM2 450 aaPredicted RBP20.85■□□□□ 0.93
CXCL1-201ENST00000395761 ANKRD18AQ8IVF6 992 aa20.84■□□□□ 0.93
CXCL1-201ENST00000395761 TMEM57Q8N5G2 664 aa20.84■□□□□ 0.93
CXCL1-201ENST00000395761 CDC5LQ99459 802 aaKnown RBP20.84■□□□□ 0.93
CXCL1-201ENST00000395761 PSMD1Q99460 953 aa20.84■□□□□ 0.93
CXCL1-201ENST00000395761 BICC1Q9H694 974 aaKnown RBP20.84■□□□□ 0.93
CXCL1-201ENST00000395761 CHMP3Q9Y3E7 222 aa20.84■□□□□ 0.93
CXCL1-201ENST00000395761 MYH3P11055 1940 aa20.84■□□□□ 0.93
CXCL1-201ENST00000395761 SBF1O95248 1867 aa20.84■□□□□ 0.93
CXCL1-201ENST00000395761 RLBP1P12271 317 aa20.83■□□□□ 0.93
CXCL1-201ENST00000395761 GRIPAP1Q4V328 841 aa20.83■□□□□ 0.93
CXCL1-201ENST00000395761 MPNDQ8N594 471 aa20.83■□□□□ 0.93
CXCL1-201ENST00000395761 ANKRD44Q8N8A2 993 aa20.83■□□□□ 0.93
CXCL1-201ENST00000395761 MEIS3Q99687 375 aa20.83■□□□□ 0.93
CXCL1-201ENST00000395761 GPSM2P81274 684 aa20.82■□□□□ 0.92
CXCL1-201ENST00000395761 DPP8Q6V1X1 898 aaPredicted RBP20.82■□□□□ 0.92
CXCL1-201ENST00000395761 ANKRD18BA2A2Z9 1011 aa20.81■□□□□ 0.92
CXCL1-201ENST00000395761 PLIN1O60240 522 aa20.81■□□□□ 0.92
CXCL1-201ENST00000395761 IFIT5Q13325 482 aaKnown RBP20.81■□□□□ 0.92
CXCL1-201ENST00000395761 RABL6Q3YEC7 729 aaPredicted RBP20.81■□□□□ 0.92
CXCL1-201ENST00000395761 DZIP1LQ8IYY4 767 aaKnown RBP20.81■□□□□ 0.92
CXCL1-201ENST00000395761 NSFL1CQ9UNZ2 370 aaKnown RBP20.81■□□□□ 0.92
CXCL1-201ENST00000395761 UBTFL1P0CB47 393 aaPredicted RBP20.8■□□□□ 0.92
CXCL1-201ENST00000395761 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
CXCL1-201ENST00000395761 PANK1Q8TE04 598 aa20.8■□□□□ 0.92
CXCL1-201ENST00000395761 ZNF594Q96JF6 807 aaPredicted RBP20.8■□□□□ 0.92
CXCL1-201ENST00000395761 RTFDC1Q9BY42 306 aaPredicted RBP20.8■□□□□ 0.92
CXCL1-201ENST00000395761 BSDC1Q9NW68 430 aaPredicted RBP20.8■□□□□ 0.92
CXCL1-201ENST00000395761 CCDC88AQ3V6T2 1871 aa20.79■□□□□ 0.92
CXCL1-201ENST00000395761 LRRC37AA6NMS7 1700 aa20.79■□□□□ 0.92
CXCL1-201ENST00000395761 IGHMBP2P38935 993 aaKnown RBP20.79■□□□□ 0.92
CXCL1-201ENST00000395761 IARSP41252 1262 aaKnown RBP20.79■□□□□ 0.92
CXCL1-201ENST00000395761 ZNF784Q8NCA9 323 aaPredicted RBP20.79■□□□□ 0.92
CXCL1-201ENST00000395761 POLLQ9UGP5 575 aa20.79■□□□□ 0.92
CXCL1-201ENST00000395761 LRRFIP2Q9Y608 721 aaKnown RBP20.79■□□□□ 0.92
CXCL1-201ENST00000395761 CENPBP07199 599 aaPredicted RBP20.78■□□□□ 0.92
CXCL1-201ENST00000395761 CCDC57Q2TAC2 916 aa20.78■□□□□ 0.92
CXCL1-201ENST00000395761 MINPP1Q9UNW1 487 aa20.78■□□□□ 0.92
CXCL1-201ENST00000395761 WTIPA6NIX2 430 aaPredicted RBP20.77■□□□□ 0.92
CXCL1-201ENST00000395761 ZNF526Q8TF50 670 aaPredicted RBP20.77■□□□□ 0.92
CXCL1-201ENST00000395761 MPHOSPH8Q99549 860 aa20.77■□□□□ 0.92
CXCL1-201ENST00000395761 ANKIB1Q9P2G1 1089 aa20.77■□□□□ 0.92
CXCL1-201ENST00000395761 GNAI3P08754 354 aa20.76■□□□□ 0.91
CXCL1-201ENST00000395761 AOC3Q16853 763 aa20.76■□□□□ 0.91
CXCL1-201ENST00000395761 ITPRIPQ8IWB1 547 aa20.76■□□□□ 0.91
CXCL1-201ENST00000395761 SUPT20HQ8NEM7 779 aa20.76■□□□□ 0.91
CXCL1-201ENST00000395761 TBC1D16Q8TBP0 767 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms