RNA–Protein interactions for RNA: ENST00000395397.7

NR1H3-201, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-201ENST00000395397 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
NR1H3-201ENST00000395397 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
NR1H3-201ENST00000395397 ZSCAN22P10073 491 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-201ENST00000395397 NASPP49321 788 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-201ENST00000395397 HS1BP3Q53T59 392 aa16.12■□□□□ 0.17
NR1H3-201ENST00000395397 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
NR1H3-201ENST00000395397 LRSAM1Q6UWE0 723 aa16.12■□□□□ 0.17
NR1H3-201ENST00000395397 UBE3BQ7Z3V4 1068 aa16.12■□□□□ 0.17
NR1H3-201ENST00000395397 DEFB132Q7Z7B7 95 aa16.12■□□□□ 0.17
NR1H3-201ENST00000395397 VSIG10Q8N0Z9 540 aa16.12■□□□□ 0.17
NR1H3-201ENST00000395397 SYAP1Q96A49 352 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-201ENST00000395397 HAUS7Q99871 368 aa16.12■□□□□ 0.17
NR1H3-201ENST00000395397 TEX13AQ9BXU3 409 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-201ENST00000395397 BOLA2Q9H3K6 86 aa16.12■□□□□ 0.17
NR1H3-201ENST00000395397 DBNLQ9UJU6 430 aaKnown RBP16.12■□□□□ 0.17
NR1H3-201ENST00000395397 SLC27A2O14975 620 aa16.11■□□□□ 0.17
NR1H3-201ENST00000395397 TAF5LO75529 589 aa16.11■□□□□ 0.17
NR1H3-201ENST00000395397 CIAO1O76071 339 aa16.11■□□□□ 0.17
NR1H3-201ENST00000395397 KRT32Q14532 448 aa16.11■□□□□ 0.17
NR1H3-201ENST00000395397 ADCK5Q3MIX3 580 aa16.11■□□□□ 0.17
NR1H3-201ENST00000395397 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
NR1H3-201ENST00000395397 GJD4Q96KN9 370 aaPredicted RBP16.11■□□□□ 0.17
NR1H3-201ENST00000395397 FAM227BQ96M60 508 aa16.11■□□□□ 0.17
NR1H3-201ENST00000395397 JAKMIP1Q96N16 626 aaKnown RBP16.11■□□□□ 0.17
NR1H3-201ENST00000395397 CWC25Q9NXE8 425 aaPredicted RBP16.11■□□□□ 0.17
NR1H3-201ENST00000395397 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
NR1H3-201ENST00000395397 AFDNP55196 1824 aaKnown RBP16.1■□□□□ 0.17
NR1H3-201ENST00000395397 STX6O43752 255 aa16.1■□□□□ 0.17
NR1H3-201ENST00000395397 SYT1P21579 422 aa16.1■□□□□ 0.17
NR1H3-201ENST00000395397 TFCP2Q12800 502 aa16.1■□□□□ 0.17
NR1H3-201ENST00000395397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.1■□□□□ 0.17
NR1H3-201ENST00000395397 FSD1Q9BTV5 496 aa16.1■□□□□ 0.17
NR1H3-201ENST00000395397 RTN4Q9NQC3 1192 aaKnown RBP16.1■□□□□ 0.17
NR1H3-201ENST00000395397 RRAGDQ9NQL2 400 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-201ENST00000395397 TMEM63CQ9P1W3 806 aa16.1■□□□□ 0.17
NR1H3-201ENST00000395397 SMC3Q9UQE7 1217 aa16.1■□□□□ 0.17
NR1H3-201ENST00000395397 BCL9LQ86UU0 1499 aa16.1■□□□□ 0.17
NR1H3-201ENST00000395397 NUP188Q5SRE5 1749 aa16.1■□□□□ 0.17
NR1H3-201ENST00000395397 IL15P40933 162 aaPredicted RBP16.09■□□□□ 0.17
NR1H3-201ENST00000395397 SF3B2Q13435 895 aaKnown RBP16.09■□□□□ 0.17
NR1H3-201ENST00000395397 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
NR1H3-201ENST00000395397 ANP32BQ92688 251 aaKnown RBP16.09■□□□□ 0.17
NR1H3-201ENST00000395397 SIL1Q9H173 461 aa16.09■□□□□ 0.17
NR1H3-201ENST00000395397 A0A0D9SFI3 127 aa16.09■□□□□ 0.17
NR1H3-201ENST00000395397 NCLP19338 710 aaKnown RBP16.09■□□□□ 0.17
NR1H3-201ENST00000395397 LMBR1LQ6UX01 489 aa16.09■□□□□ 0.17
NR1H3-201ENST00000395397 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
NR1H3-201ENST00000395397 PDLIM2Q96JY6 352 aa16.09■□□□□ 0.17
NR1H3-201ENST00000395397 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
NR1H3-201ENST00000395397 LETM1O95202 739 aaPredicted RBP16.08■□□□□ 0.16
NR1H3-201ENST00000395397 F13A1P00488 732 aa16.08■□□□□ 0.16
NR1H3-201ENST00000395397 PRIM1P49642 420 aaKnown RBP16.08■□□□□ 0.16
NR1H3-201ENST00000395397 CSPP1Q1MSJ5 1256 aa16.08■□□□□ 0.16
NR1H3-201ENST00000395397 PLA2G12BQ9BX93 195 aa16.08■□□□□ 0.16
NR1H3-201ENST00000395397 COL22A1Q8NFW1 1626 aaPredicted RBP16.07■□□□□ 0.16
NR1H3-201ENST00000395397 PALLDQ8WX93 1383 aa16.07■□□□□ 0.16
NR1H3-201ENST00000395397 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
NR1H3-201ENST00000395397 PTCD1O75127 700 aaKnown RBP16.07■□□□□ 0.16
NR1H3-201ENST00000395397 PHF14O94880 888 aa16.07■□□□□ 0.16
NR1H3-201ENST00000395397 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
NR1H3-201ENST00000395397 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
NR1H3-201ENST00000395397 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
NR1H3-201ENST00000395397 KBTBD3Q8NAB2 608 aa16.07■□□□□ 0.16
NR1H3-201ENST00000395397 U3KPZ7 1027 aaPredicted RBP16.07■□□□□ 0.16
NR1H3-201ENST00000395397 ABCA3Q99758 1704 aa16.07■□□□□ 0.16
NR1H3-201ENST00000395397 SHANK3Q9BYB0 1731 aa16.07■□□□□ 0.16
NR1H3-201ENST00000395397 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
NR1H3-201ENST00000395397 ESPNB1AK53 854 aa16.06■□□□□ 0.16
NR1H3-201ENST00000395397 EYA2O00167 538 aa16.06■□□□□ 0.16
NR1H3-201ENST00000395397 PDCP20941 246 aa16.06■□□□□ 0.16
NR1H3-201ENST00000395397 ME3Q16798 604 aa16.06■□□□□ 0.16
NR1H3-201ENST00000395397 MCMDC2Q4G0Z9 681 aa16.06■□□□□ 0.16
NR1H3-201ENST00000395397 BLOC1S2Q6QNY1 142 aa16.06■□□□□ 0.16
NR1H3-201ENST00000395397 TTLL7Q6ZT98 887 aa16.06■□□□□ 0.16
NR1H3-201ENST00000395397 RBSNQ9H1K0 784 aa16.06■□□□□ 0.16
NR1H3-201ENST00000395397 HELLSQ9NRZ9 838 aa16.06■□□□□ 0.16
NR1H3-201ENST00000395397 NSFL1CQ9UNZ2 370 aaKnown RBP16.06■□□□□ 0.16
NR1H3-201ENST00000395397 KCNJ4P48050 445 aa16.05■□□□□ 0.16
NR1H3-201ENST00000395397 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
NR1H3-201ENST00000395397 TRIM44Q96DX7 344 aaPredicted RBP16.05■□□□□ 0.16
NR1H3-201ENST00000395397 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
NR1H3-201ENST00000395397 MTMR6Q9Y217 621 aa16.05■□□□□ 0.16
NR1H3-201ENST00000395397 SPEF2Q9C093 1822 aa16.05■□□□□ 0.16
NR1H3-201ENST00000395397 PSDA5PKW4 1024 aaPredicted RBP16.04■□□□□ 0.16
NR1H3-201ENST00000395397 LARGE1O95461 756 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 A1BGP04217 495 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 GJB2P29033 226 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 UBE2HP62256 183 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 ST3GAL1Q11201 340 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 TPCN1Q9ULQ1 816 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 TJP1Q07157 1748 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 PIP4K2AP48426 406 aaPredicted RBP16.04■□□□□ 0.16
NR1H3-201ENST00000395397 UVSSAQ2YD98 709 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 ZNF589Q86UQ0 364 aaPredicted RBP16.04■□□□□ 0.16
NR1H3-201ENST00000395397 ARXQ96QS3 562 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 DSCC1Q9BVC3 393 aa16.04■□□□□ 0.16
NR1H3-201ENST00000395397 PCCAP05165 728 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-201ENST00000395397 CSF1RP07333 972 aa16.03■□□□□ 0.16
NR1H3-201ENST00000395397 HMGB1P09429 215 aaKnown RBP16.03■□□□□ 0.16
NR1H3-201ENST00000395397 CPA1P15085 419 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms