RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 DDX60Q8IY21 1712 aaKnown RBP17.88■□□□□ 0.45
HLA-DMA-203ENST00000395305 TIAM2Q8IVF5 1701 aa17.87■□□□□ 0.45
HLA-DMA-203ENST00000395305 PDE8AO60658 829 aa17.87■□□□□ 0.45
HLA-DMA-203ENST00000395305 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
HLA-DMA-203ENST00000395305 RBM46Q8TBY0 533 aaKnown RBP17.87■□□□□ 0.45
HLA-DMA-203ENST00000395305 DNAAF4Q8WXU2 420 aa17.87■□□□□ 0.45
HLA-DMA-203ENST00000395305 JDP2Q8WYK2 163 aa17.87■□□□□ 0.45
HLA-DMA-203ENST00000395305 NEURL1BA8MQ27 555 aa17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 POTECB2RU33 542 aa17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 FZD9O00144 591 aa17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 DDNO94850 711 aaPredicted RBP17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 SLFN5Q08AF3 891 aa17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 MPNDQ8N594 471 aa17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 SUPT20HQ8NEM7 779 aa17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 JARID2Q92833 1246 aaPredicted RBP17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 RTFDC1Q9BY42 306 aaPredicted RBP17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 CDHR2Q9BYE9 1310 aa17.86■□□□□ 0.45
HLA-DMA-203ENST00000395305 H7C1W4 665 aa17.85■□□□□ 0.45
HLA-DMA-203ENST00000395305 TAF1P21675 1872 aa17.85■□□□□ 0.45
HLA-DMA-203ENST00000395305 RPS8P62241 208 aaKnown RBP17.85■□□□□ 0.45
HLA-DMA-203ENST00000395305 CWF19L2Q2TBE0 894 aaKnown RBP17.85■□□□□ 0.45
HLA-DMA-203ENST00000395305 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
HLA-DMA-203ENST00000395305 SLC51AQ86UW1 340 aa17.85■□□□□ 0.45
HLA-DMA-203ENST00000395305 LINS1Q8NG48 757 aa17.85■□□□□ 0.45
HLA-DMA-203ENST00000395305 CELF1Q92879 486 aaKnown RBP17.85■□□□□ 0.45
HLA-DMA-203ENST00000395305 GCKRQ14397 625 aa17.84■□□□□ 0.45
HLA-DMA-203ENST00000395305 CCDC152Q4G0S7 254 aa17.84■□□□□ 0.45
HLA-DMA-203ENST00000395305 LARGE2Q8N3Y3 721 aa17.84■□□□□ 0.45
HLA-DMA-203ENST00000395305 HSPA6P17066 643 aa17.83■□□□□ 0.44
HLA-DMA-203ENST00000395305 FSTL1Q12841 308 aa17.83■□□□□ 0.44
HLA-DMA-203ENST00000395305 TRMT2AQ8IZ69 625 aaKnown RBP17.83■□□□□ 0.44
HLA-DMA-203ENST00000395305 MIER1Q8N108 512 aa17.83■□□□□ 0.44
HLA-DMA-203ENST00000395305 L3MBTL3Q96JM7 780 aaPredicted RBP17.83■□□□□ 0.44
HLA-DMA-203ENST00000395305 WDR90Q96KV7 1748 aa17.83■□□□□ 0.44
HLA-DMA-203ENST00000395305 SEC31BQ9NQW1 1179 aa17.82■□□□□ 0.44
HLA-DMA-203ENST00000395305 ZNF541Q9H0D2 1346 aa17.81■□□□□ 0.44
HLA-DMA-203ENST00000395305 PPIP5K2O43314 1243 aa17.81■□□□□ 0.44
HLA-DMA-203ENST00000395305 EIF6P56537 245 aaKnown RBP17.81■□□□□ 0.44
HLA-DMA-203ENST00000395305 TTLL11Q8NHH1 800 aa17.81■□□□□ 0.44
HLA-DMA-203ENST00000395305 CDCA7LQ96GN5 454 aa17.81■□□□□ 0.44
HLA-DMA-203ENST00000395305 CEP350Q5VT06 3117 aa17.81■□□□□ 0.44
HLA-DMA-203ENST00000395305 IQCA1LA6NCM1 817 aa17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 F6X3S4 739 aa17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 CTSWP56202 376 aa17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 AOC3Q16853 763 aa17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 BEND3Q5T5X7 828 aa17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 UBE3BQ7Z3V4 1068 aa17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 NIM1KQ8IY84 436 aa17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 GPC2Q8N158 579 aa17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 SMC1BQ8NDV3 1235 aa17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 NSFL1CQ9UNZ2 370 aaKnown RBP17.8■□□□□ 0.44
HLA-DMA-203ENST00000395305 CASP7P55210 303 aa17.79■□□□□ 0.44
HLA-DMA-203ENST00000395305 KIAA2012Q0VF49 1180 aa17.79■□□□□ 0.44
HLA-DMA-203ENST00000395305 MRPL50Q8N5N7 158 aaKnown RBP17.79■□□□□ 0.44
HLA-DMA-203ENST00000395305 PLA2G12BQ9BX93 195 aa17.79■□□□□ 0.44
HLA-DMA-203ENST00000395305 GPSM2P81274 684 aa17.78■□□□□ 0.44
HLA-DMA-203ENST00000395305 ANKRD18AQ8IVF6 992 aa17.78■□□□□ 0.44
HLA-DMA-203ENST00000395305 CCDC85AQ96PX6 553 aaPredicted RBP17.78■□□□□ 0.44
HLA-DMA-203ENST00000395305 ZNRF3Q9ULT6 936 aa17.78■□□□□ 0.44
HLA-DMA-203ENST00000395305 COL4A5P29400 1685 aa17.77■□□□□ 0.44
HLA-DMA-203ENST00000395305 CSF1RP07333 972 aa17.77■□□□□ 0.44
HLA-DMA-203ENST00000395305 WASHC4Q2M389 1173 aa17.77■□□□□ 0.44
HLA-DMA-203ENST00000395305 CDC5LQ99459 802 aaKnown RBP17.77■□□□□ 0.44
HLA-DMA-203ENST00000395305 TAF1DQ9H5J8 278 aaPredicted RBP17.77■□□□□ 0.44
HLA-DMA-203ENST00000395305 PODXL2Q9NZ53 605 aa17.77■□□□□ 0.44
HLA-DMA-203ENST00000395305 POLLQ9UGP5 575 aa17.77■□□□□ 0.44
HLA-DMA-203ENST00000395305 RTL9Q8NET4 1388 aa17.77■□□□□ 0.43
HLA-DMA-203ENST00000395305 C6orf229H3BNL8 230 aa17.76■□□□□ 0.43
HLA-DMA-203ENST00000395305 CT47B1P0C2W7 299 aaPredicted RBP17.76■□□□□ 0.43
HLA-DMA-203ENST00000395305 APLP1P51693 650 aa17.76■□□□□ 0.43
HLA-DMA-203ENST00000395305 ALDH1L2Q3SY69 923 aa17.76■□□□□ 0.43
HLA-DMA-203ENST00000395305 SSH1Q8WYL5 1049 aa17.76■□□□□ 0.43
HLA-DMA-203ENST00000395305 GREM2Q9H772 168 aa17.76■□□□□ 0.43
HLA-DMA-203ENST00000395305 HACL1Q9UJ83 578 aa17.76■□□□□ 0.43
HLA-DMA-203ENST00000395305 GJA3Q9Y6H8 435 aa17.76■□□□□ 0.43
HLA-DMA-203ENST00000395305 SCN4AP35499 1836 aa17.76■□□□□ 0.43
HLA-DMA-203ENST00000395305 LRRC37AA6NMS7 1700 aa17.75■□□□□ 0.43
HLA-DMA-203ENST00000395305 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
HLA-DMA-203ENST00000395305 CXCL9Q07325 125 aa17.75■□□□□ 0.43
HLA-DMA-203ENST00000395305 SLC4A10Q6U841 1118 aa17.75■□□□□ 0.43
HLA-DMA-203ENST00000395305 TBC1D16Q8TBP0 767 aa17.75■□□□□ 0.43
HLA-DMA-203ENST00000395305 EYA3Q99504 573 aa17.75■□□□□ 0.43
HLA-DMA-203ENST00000395305 BSDC1Q9NW68 430 aaPredicted RBP17.75■□□□□ 0.43
HLA-DMA-203ENST00000395305 PTPRCP08575 1304 aa17.74■□□□□ 0.43
HLA-DMA-203ENST00000395305 MYH3P11055 1940 aa17.74■□□□□ 0.43
HLA-DMA-203ENST00000395305 COL4A1P02462 1669 aa17.74■□□□□ 0.43
HLA-DMA-203ENST00000395305 SRCIN1Q9C0H9 1055 aa17.74■□□□□ 0.43
HLA-DMA-203ENST00000395305 ANKIB1Q9P2G1 1089 aa17.74■□□□□ 0.43
HLA-DMA-203ENST00000395305 EPHX2P34913 555 aa17.73■□□□□ 0.43
HLA-DMA-203ENST00000395305 TNIP1Q15025 636 aa17.73■□□□□ 0.43
HLA-DMA-203ENST00000395305 CHADLQ6NUI6 762 aa17.73■□□□□ 0.43
HLA-DMA-203ENST00000395305 PNMA8AQ86V59 439 aaPredicted RBP17.73■□□□□ 0.43
HLA-DMA-203ENST00000395305 ZC3H12CQ9C0D7 883 aaKnown RBP17.73■□□□□ 0.43
HLA-DMA-203ENST00000395305 C9orf78Q9NZ63 289 aaPredicted RBP17.73■□□□□ 0.43
HLA-DMA-203ENST00000395305 GGA1Q9UJY5 639 aa17.73■□□□□ 0.43
HLA-DMA-203ENST00000395305 GRM8O00222 908 aa17.72■□□□□ 0.43
HLA-DMA-203ENST00000395305 RIMBP2O15034 1052 aa17.72■□□□□ 0.43
HLA-DMA-203ENST00000395305 FOXO4P98177 505 aa17.72■□□□□ 0.43
HLA-DMA-203ENST00000395305 CIAPIN1Q6FI81 312 aa17.72■□□□□ 0.43
HLA-DMA-203ENST00000395305 LDHDQ86WU2 507 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms