RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TLL2Q9Y6L7 1015 aa27.69■■■□□ 2.02
TRAF4-203ENST00000394925 LMOD3Q0VAK6 560 aa27.68■■■□□ 2.02
TRAF4-203ENST00000394925 TCIRG1Q13488 830 aa27.68■■■□□ 2.02
TRAF4-203ENST00000394925 CIAPIN1Q6FI81 312 aa27.68■■■□□ 2.02
TRAF4-203ENST00000394925 BEGAINQ9BUH8 593 aa27.68■■■□□ 2.02
TRAF4-203ENST00000394925 THSD7BQ9C0I4 1608 aa27.67■■■□□ 2.02
TRAF4-203ENST00000394925 RAD17O75943 681 aa27.67■■■□□ 2.02
TRAF4-203ENST00000394925 KIAA2012Q0VF49 1180 aa27.67■■■□□ 2.02
TRAF4-203ENST00000394925 ZNF428Q96B54 188 aa27.67■■■□□ 2.02
TRAF4-203ENST00000394925 TAF1P21675 1872 aa27.67■■■□□ 2.02
TRAF4-203ENST00000394925 SH3TC1Q8TE82 1336 aa27.67■■■□□ 2.02
TRAF4-203ENST00000394925 GRAPQ13588 217 aa27.66■■■□□ 2.02
TRAF4-203ENST00000394925 GRAPLQ8TC17 118 aaPredicted RBP27.66■■■□□ 2.02
TRAF4-203ENST00000394925 ABHD8Q96I13 439 aa27.66■■■□□ 2.02
TRAF4-203ENST00000394925 BCL2L13Q9BXK5 485 aa27.66■■■□□ 2.02
TRAF4-203ENST00000394925 CELF2O95319 508 aaKnown RBP27.65■■■□□ 2.02
TRAF4-203ENST00000394925 NEUROD2Q15784 382 aa27.65■■■□□ 2.02
TRAF4-203ENST00000394925 KRT24Q2M2I5 525 aa27.65■■■□□ 2.02
TRAF4-203ENST00000394925 GLIS2Q9BZE0 524 aaPredicted RBP27.65■■■□□ 2.02
TRAF4-203ENST00000394925 AOC2O75106 756 aa27.64■■■□□ 2.02
TRAF4-203ENST00000394925 TNIP1Q15025 636 aa27.64■■■□□ 2.02
TRAF4-203ENST00000394925 HIRAP54198 1017 aaPredicted RBP27.62■■■□□ 2.01
TRAF4-203ENST00000394925 SAPCD2Q86UD0 394 aa27.62■■■□□ 2.01
TRAF4-203ENST00000394925 CCDC146Q8IYE0 955 aa27.62■■■□□ 2.01
TRAF4-203ENST00000394925 PGAP2Q9UHJ9 254 aa27.62■■■□□ 2.01
TRAF4-203ENST00000394925 LAS1LQ9Y4W2 734 aaKnown RBP27.62■■■□□ 2.01
TRAF4-203ENST00000394925 CDHR2Q9BYE9 1310 aa27.62■■■□□ 2.01
TRAF4-203ENST00000394925 MAP2K2P36507 400 aa27.61■■■□□ 2.01
TRAF4-203ENST00000394925 RALBP1Q15311 655 aa27.61■■■□□ 2.01
TRAF4-203ENST00000394925 ZNF408Q9H9D4 720 aa27.61■■■□□ 2.01
TRAF4-203ENST00000394925 CHPF2Q9P2E5 772 aa27.61■■■□□ 2.01
TRAF4-203ENST00000394925 YDJCA8MPS7 323 aa27.6■■■□□ 2.01
TRAF4-203ENST00000394925 CHL1O00533 1208 aa27.6■■■□□ 2.01
TRAF4-203ENST00000394925 TRPM4Q8TD43 1214 aa27.6■■■□□ 2.01
TRAF4-203ENST00000394925 CNOT7Q9UIV1 285 aaKnown RBP27.6■■■□□ 2.01
TRAF4-203ENST00000394925 TSKSQ9UJT2 592 aa27.6■■■□□ 2.01
TRAF4-203ENST00000394925 SHTN1A0MZ66 631 aa27.59■■■□□ 2.01
TRAF4-203ENST00000394925 TMC4Q7Z404 712 aa27.59■■■□□ 2.01
TRAF4-203ENST00000394925 ZC3H15Q8WU90 426 aaKnown RBP27.59■■■□□ 2.01
TRAF4-203ENST00000394925 DUOX1Q9NRD9 1551 aa27.58■■■□□ 2.01
TRAF4-203ENST00000394925 H7C1D1 291 aa27.57■■■□□ 2
TRAF4-203ENST00000394925 HDGFL1Q5TGJ6 251 aa27.57■■■□□ 2
TRAF4-203ENST00000394925 CDC37L1Q7L3B6 337 aa27.57■■■□□ 2
TRAF4-203ENST00000394925 FAM89AQ96GI7 184 aa27.57■■■□□ 2
TRAF4-203ENST00000394925 DDX60Q8IY21 1712 aaKnown RBP27.56■■■□□ 2
TRAF4-203ENST00000394925 PLBD2Q8NHP8 589 aa27.56■■■□□ 2
TRAF4-203ENST00000394925 ZBTB12Q9Y330 459 aaPredicted RBP27.56■■■□□ 2
TRAF4-203ENST00000394925 LRRC37AA6NMS7 1700 aa27.55■■■□□ 2
TRAF4-203ENST00000394925 ATP5J2-PTCD1G3V325 749 aa27.55■■■□□ 2
TRAF4-203ENST00000394925 WASHC4Q2M389 1173 aa27.55■■■□□ 2
TRAF4-203ENST00000394925 ANKRD13DQ6ZTN6 518 aa27.55■■■□□ 2
TRAF4-203ENST00000394925 MICALL2Q8IY33 904 aa27.55■■■□□ 2
TRAF4-203ENST00000394925 CELF1Q92879 486 aaKnown RBP27.55■■■□□ 2
TRAF4-203ENST00000394925 HHIPL1Q96JK4 782 aa27.55■■■□□ 2
TRAF4-203ENST00000394925 NSFL1CQ9UNZ2 370 aaKnown RBP27.55■■■□□ 2
TRAF4-203ENST00000394925 TRIM35Q9UPQ4 493 aa27.55■■■□□ 2
TRAF4-203ENST00000394925 ISCA1Q9BUE6 129 aa27.54■■■□□ 2
TRAF4-203ENST00000394925 DBNDD1Q9H9R9 158 aa27.54■■■□□ 2
TRAF4-203ENST00000394925 RIMBP2O15034 1052 aa27.53■■■□□ 2
TRAF4-203ENST00000394925 RTL5Q5HYW3 569 aaPredicted RBP27.53■■■□□ 2
TRAF4-203ENST00000394925 USP48Q86UV5 1035 aa27.53■■■□□ 2
TRAF4-203ENST00000394925 CCDC85CA6NKD9 419 aa27.52■■■□□ 2
TRAF4-203ENST00000394925 C6orf229H3BNL8 230 aa27.52■■■□□ 2
TRAF4-203ENST00000394925 PSMD14O00487 310 aa27.52■■■□□ 2
TRAF4-203ENST00000394925 SF3B3Q15393 1217 aaKnown RBP27.52■■■□□ 2
TRAF4-203ENST00000394925 SAMD7Q7Z3H4 446 aa27.52■■■□□ 2
TRAF4-203ENST00000394925 RUNDC1Q96C34 613 aa27.52■■■□□ 2
TRAF4-203ENST00000394925 DBF4Q9UBU7 674 aaPredicted RBP27.52■■■□□ 2
TRAF4-203ENST00000394925 FAM161AQ3B820 660 aa27.51■■□□□ 1.99
TRAF4-203ENST00000394925 DLK2Q6UY11 383 aa27.51■■□□□ 1.99
TRAF4-203ENST00000394925 DPF2Q92785 391 aa27.51■■□□□ 1.99
TRAF4-203ENST00000394925 MYBBP1AQ9BQG0 1328 aaKnown RBP27.5■■□□□ 1.99
TRAF4-203ENST00000394925 CASP8AP2Q9UKL3 1982 aa27.5■■□□□ 1.99
TRAF4-203ENST00000394925 CA12O43570 354 aa27.5■■□□□ 1.99
TRAF4-203ENST00000394925 HOXB7P09629 217 aa27.5■■□□□ 1.99
TRAF4-203ENST00000394925 BRPF1P55201 1214 aaPredicted RBP27.5■■□□□ 1.99
TRAF4-203ENST00000394925 GPSM2P81274 684 aa27.5■■□□□ 1.99
TRAF4-203ENST00000394925 POLLQ9UGP5 575 aa27.5■■□□□ 1.99
TRAF4-203ENST00000394925 WDR43Q15061 677 aaKnown RBP eCLIP27.49■■□□□ 1.99
TRAF4-203ENST00000394925 TBC1D10BQ4KMP7 808 aaPredicted RBP27.49■■□□□ 1.99
TRAF4-203ENST00000394925 POLR2AP24928 1970 aaKnown RBP27.49■■□□□ 1.99
TRAF4-203ENST00000394925 COL4A1P02462 1669 aa27.49■■□□□ 1.99
TRAF4-203ENST00000394925 DOK7Q18PE1 504 aa27.48■■□□□ 1.99
TRAF4-203ENST00000394925 KCNQ5Q9NR82 932 aa27.48■■□□□ 1.99
TRAF4-203ENST00000394925 HYPKQ9NX55 129 aa27.48■■□□□ 1.99
TRAF4-203ENST00000394925 IRS4O14654 1257 aaPredicted RBP27.47■■□□□ 1.99
TRAF4-203ENST00000394925 ECE2O60344 883 aa27.47■■□□□ 1.99
TRAF4-203ENST00000394925 EGFRP00533 1210 aa27.47■■□□□ 1.99
TRAF4-203ENST00000394925 HUNKP57058 714 aa27.47■■□□□ 1.99
TRAF4-203ENST00000394925 DUSP27Q5VZP5 1158 aa27.47■■□□□ 1.99
TRAF4-203ENST00000394925 EYA3Q99504 573 aa27.47■■□□□ 1.99
TRAF4-203ENST00000394925 RBM26Q5T8P6 1007 aaKnown RBP27.46■■□□□ 1.99
TRAF4-203ENST00000394925 KRT26Q7Z3Y9 468 aa27.46■■□□□ 1.99
TRAF4-203ENST00000394925 ZIC5Q96T25 663 aa27.46■■□□□ 1.99
TRAF4-203ENST00000394925 RPS8P62241 208 aaKnown RBP27.45■■□□□ 1.98
TRAF4-203ENST00000394925 DDX10Q13206 875 aaKnown RBP27.45■■□□□ 1.98
TRAF4-203ENST00000394925 NOGQ13253 232 aa27.45■■□□□ 1.98
TRAF4-203ENST00000394925 CFAP44Q96MT7 982 aa27.45■■□□□ 1.98
TRAF4-203ENST00000394925 ADAMTS8Q9UP79 889 aa27.45■■□□□ 1.98
TRAF4-203ENST00000394925 RPS12P25398 132 aaKnown RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms