RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 FANCIQ9NVI1 1328 aa11.45□□□□□ -0.58
ATG4A-205ENST00000394892 TMEM88BA6NKF7 163 aa11.45□□□□□ -0.58
ATG4A-205ENST00000394892 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
ATG4A-205ENST00000394892 BBOX1O75936 387 aa11.45□□□□□ -0.58
ATG4A-205ENST00000394892 AOC3Q16853 763 aa11.45□□□□□ -0.58
ATG4A-205ENST00000394892 EAPPQ56P03 285 aaPredicted RBP11.45□□□□□ -0.58
ATG4A-205ENST00000394892 CCDC30Q5VVM6 783 aa11.45□□□□□ -0.58
ATG4A-205ENST00000394892 RIC3Q7Z5B4 369 aa11.45□□□□□ -0.58
ATG4A-205ENST00000394892 METTL22Q9BUU2 404 aaPredicted RBP11.45□□□□□ -0.58
ATG4A-205ENST00000394892 SEC31BQ9NQW1 1179 aa11.45□□□□□ -0.58
ATG4A-205ENST00000394892 PI4KAP2A4QPH2 592 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 VAMP4O75379 141 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 CTCFP49711 727 aaPredicted RBP11.44□□□□□ -0.58
ATG4A-205ENST00000394892 SCNN1DP51172 638 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 TWISTNBQ3B726 338 aaPredicted RBP11.44□□□□□ -0.58
ATG4A-205ENST00000394892 DDX46Q7L014 1031 aaKnown RBP11.44□□□□□ -0.58
ATG4A-205ENST00000394892 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
ATG4A-205ENST00000394892 PI4KAP1Q8N8J0 262 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 ZBTB38Q8NAP3 1195 aaPredicted RBP11.44□□□□□ -0.58
ATG4A-205ENST00000394892 PRDM10Q9NQV6 1147 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 HACL1Q9UJ83 578 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 MAP3K2Q9Y2U5 619 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 DUOX1Q9NRD9 1551 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 CCDC88AQ3V6T2 1871 aa11.44□□□□□ -0.58
ATG4A-205ENST00000394892 CNTNAP1P78357 1384 aa11.43□□□□□ -0.58
ATG4A-205ENST00000394892 YDJCA8MPS7 323 aa11.43□□□□□ -0.58
ATG4A-205ENST00000394892 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
ATG4A-205ENST00000394892 PCCAP05165 728 aaPredicted RBP11.43□□□□□ -0.58
ATG4A-205ENST00000394892 EPS15P42566 896 aa11.43□□□□□ -0.58
ATG4A-205ENST00000394892 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
ATG4A-205ENST00000394892 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
ATG4A-205ENST00000394892 WDR63Q8IWG1 891 aa11.43□□□□□ -0.58
ATG4A-205ENST00000394892 FAM9BQ8IZU0 186 aa11.43□□□□□ -0.58
ATG4A-205ENST00000394892 LARGE2Q8N3Y3 721 aa11.43□□□□□ -0.58
ATG4A-205ENST00000394892 DICER1Q9UPY3 1922 aaKnown RBP11.43□□□□□ -0.58
ATG4A-205ENST00000394892 ZNF521Q96K83 1311 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 PASKQ96RG2 1323 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 ANKRD36CQ5JPF3 1778 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 WTIPA6NIX2 430 aaPredicted RBP11.42□□□□□ -0.58
ATG4A-205ENST00000394892 FOXN1O15353 648 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 PPIP5K2O43314 1243 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 SLC4A2P04920 1241 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 EPHX2P34913 555 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 GPSM2P81274 684 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 FMR1Q06787 632 aaKnown RBP eCLIP11.42□□□□□ -0.58
ATG4A-205ENST00000394892 CXCL9Q07325 125 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 KIAA2012Q0VF49 1180 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 CWF19L2Q2TBE0 894 aaKnown RBP11.42□□□□□ -0.58
ATG4A-205ENST00000394892 GRIPAP1Q4V328 841 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 GPC2Q8N158 579 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 MPNDQ8N594 471 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 CCDC191Q8NCU4 936 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 JDP2Q8WYK2 163 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 GPR101Q96P66 508 aaPredicted RBP11.42□□□□□ -0.58
ATG4A-205ENST00000394892 POLLQ9UGP5 575 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 LTBP1Q14766 1721 aa11.42□□□□□ -0.58
ATG4A-205ENST00000394892 DDX60Q8IY21 1712 aaKnown RBP11.41□□□□□ -0.58
ATG4A-205ENST00000394892 SHTN1A0MZ66 631 aa11.41□□□□□ -0.58
ATG4A-205ENST00000394892 CASP7P55210 303 aa11.41□□□□□ -0.58
ATG4A-205ENST00000394892 DPP8Q6V1X1 898 aaPredicted RBP11.41□□□□□ -0.58
ATG4A-205ENST00000394892 CCDC85AQ96PX6 553 aaPredicted RBP11.41□□□□□ -0.58
ATG4A-205ENST00000394892 KCNQ5Q9NR82 932 aa11.41□□□□□ -0.58
ATG4A-205ENST00000394892 CWC25Q9NXE8 425 aaPredicted RBP11.41□□□□□ -0.58
ATG4A-205ENST00000394892 GJA3Q9Y6H8 435 aa11.41□□□□□ -0.58
ATG4A-205ENST00000394892 LAMB2P55268 1798 aa11.41□□□□□ -0.58
ATG4A-205ENST00000394892 NEURL1BA8MQ27 555 aa11.4□□□□□ -0.58
ATG4A-205ENST00000394892 LMOD1P29536 600 aaPredicted RBP11.4□□□□□ -0.58
ATG4A-205ENST00000394892 VEGFBP49765 207 aa11.4□□□□□ -0.58
ATG4A-205ENST00000394892 EIF6P56537 245 aaKnown RBP11.4□□□□□ -0.58
ATG4A-205ENST00000394892 RPS8P62241 208 aaKnown RBP11.4□□□□□ -0.58
ATG4A-205ENST00000394892 MAP2K1Q02750 393 aaPredicted RBP11.4□□□□□ -0.58
ATG4A-205ENST00000394892 FLIIQ13045 1269 aa11.4□□□□□ -0.58
ATG4A-205ENST00000394892 DEFB115Q30KQ5 88 aa11.4□□□□□ -0.58
ATG4A-205ENST00000394892 NIM1KQ8IY84 436 aa11.4□□□□□ -0.58
ATG4A-205ENST00000394892 CNTROBQ8N137 903 aa11.4□□□□□ -0.58
ATG4A-205ENST00000394892 VPS33BQ9H267 617 aa11.4□□□□□ -0.58
ATG4A-205ENST00000394892 ZNRF3Q9ULT6 936 aa11.4□□□□□ -0.58
ATG4A-205ENST00000394892 ABT1Q9ULW3 272 aaKnown RBP11.4□□□□□ -0.58
ATG4A-205ENST00000394892 CDHR2Q9BYE9 1310 aa11.39□□□□□ -0.59
ATG4A-205ENST00000394892 ADAMTSL1Q8N6G6 1762 aa11.39□□□□□ -0.59
ATG4A-205ENST00000394892 H7C1W4 665 aa11.39□□□□□ -0.59
ATG4A-205ENST00000394892 PDE8AO60658 829 aa11.39□□□□□ -0.59
ATG4A-205ENST00000394892 RAD17O75943 681 aa11.39□□□□□ -0.59
ATG4A-205ENST00000394892 MAP1SQ66K74 1059 aaPredicted RBP11.39□□□□□ -0.59
ATG4A-205ENST00000394892 BEGAINQ9BUH8 593 aa11.39□□□□□ -0.59
ATG4A-205ENST00000394892 TMX4Q9H1E5 349 aaPredicted RBP11.39□□□□□ -0.59
ATG4A-205ENST00000394892 TAF1P21675 1872 aa11.38□□□□□ -0.59
ATG4A-205ENST00000394892 F6X3S4 739 aa11.38□□□□□ -0.59
ATG4A-205ENST00000394892 DDX58O95786 925 aaKnown RBP11.38□□□□□ -0.59
ATG4A-205ENST00000394892 GMPSP49915 693 aaPredicted RBP11.38□□□□□ -0.59
ATG4A-205ENST00000394892 HIRAP54198 1017 aaPredicted RBP11.38□□□□□ -0.59
ATG4A-205ENST00000394892 TMC4Q7Z404 712 aa11.38□□□□□ -0.59
ATG4A-205ENST00000394892 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
ATG4A-205ENST00000394892 TBC1D16Q8TBP0 767 aa11.38□□□□□ -0.59
ATG4A-205ENST00000394892 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
ATG4A-205ENST00000394892 WBP1LQ9NX94 342 aa11.38□□□□□ -0.59
ATG4A-205ENST00000394892 NSFL1CQ9UNZ2 370 aaKnown RBP11.38□□□□□ -0.59
ATG4A-205ENST00000394892 RTL9Q8NET4 1388 aa11.38□□□□□ -0.59
ATG4A-205ENST00000394892 PCNTO95613 3336 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms