RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 KCNJ4P48050 445 aa24.67■■□□□ 1.54
PRKCD-202ENST00000394729 FOXD4L5Q5VV16 416 aaPredicted RBP24.67■■□□□ 1.54
PRKCD-202ENST00000394729 FOXD4L4Q8WXT5 416 aaPredicted RBP24.67■■□□□ 1.54
PRKCD-202ENST00000394729 NRAPQ86VF7 1730 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 A0A0D9SFI3 127 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 EIF5P55010 431 aaKnown RBP24.66■■□□□ 1.54
PRKCD-202ENST00000394729 GORABQ5T7V8 394 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 CCDC129Q6ZRS4 1044 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 A0A1B0GUL7 405 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 EYA2O00167 538 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 GOLIM4O00461 696 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 SGSM2O43147 1006 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 FKBP4Q02790 459 aaKnown RBP eCLIP24.66■■□□□ 1.54
PRKCD-202ENST00000394729 PI16Q6UXB8 463 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 LDHAL6AQ6ZMR3 332 aa24.66■■□□□ 1.54
PRKCD-202ENST00000394729 FNBP4Q8N3X1 1017 aaPredicted RBP24.66■■□□□ 1.54
PRKCD-202ENST00000394729 PCCAP05165 728 aaPredicted RBP24.65■■□□□ 1.54
PRKCD-202ENST00000394729 CNNM1Q9NRU3 951 aa24.65■■□□□ 1.54
PRKCD-202ENST00000394729 AOX1Q06278 1338 aa24.65■■□□□ 1.54
PRKCD-202ENST00000394729 RABEP1Q15276 862 aa24.64■■□□□ 1.54
PRKCD-202ENST00000394729 HSP90AB3PQ58FF7 597 aa24.64■■□□□ 1.54
PRKCD-202ENST00000394729 RASEFQ8IZ41 740 aa24.64■■□□□ 1.53
PRKCD-202ENST00000394729 EVI5LQ96CN4 794 aa24.64■■□□□ 1.53
PRKCD-202ENST00000394729 CEP126Q9P2H0 1117 aa24.64■■□□□ 1.53
PRKCD-202ENST00000394729 UTRNP46939 3433 aa24.64■■□□□ 1.53
PRKCD-202ENST00000394729 PRPF40BQ6NWY9 871 aaKnown RBP24.63■■□□□ 1.53
PRKCD-202ENST00000394729 AMIGO3Q86WK7 504 aa24.63■■□□□ 1.53
PRKCD-202ENST00000394729 TTLL11Q8NHH1 800 aa24.63■■□□□ 1.53
PRKCD-202ENST00000394729 GJD4Q96KN9 370 aaPredicted RBP24.63■■□□□ 1.53
PRKCD-202ENST00000394729 SEC31BQ9NQW1 1179 aa24.63■■□□□ 1.53
PRKCD-202ENST00000394729 SRP68Q9UHB9 627 aaKnown RBP24.63■■□□□ 1.53
PRKCD-202ENST00000394729 ZGPATQ8N5A5 531 aaKnown RBP24.63■■□□□ 1.53
PRKCD-202ENST00000394729 MCCP23508 829 aa24.62■■□□□ 1.53
PRKCD-202ENST00000394729 METTL24Q5JXM2 366 aa24.62■■□□□ 1.53
PRKCD-202ENST00000394729 ZNF589Q86UQ0 364 aaPredicted RBP24.62■■□□□ 1.53
PRKCD-202ENST00000394729 COL9A3Q14050 684 aaPredicted RBP24.62■■□□□ 1.53
PRKCD-202ENST00000394729 TCEANC2Q96MN5 208 aa24.62■■□□□ 1.53
PRKCD-202ENST00000394729 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.61■■□□□ 1.53
PRKCD-202ENST00000394729 GNPATO15228 680 aa24.61■■□□□ 1.53
PRKCD-202ENST00000394729 IL15P40933 162 aaPredicted RBP24.61■■□□□ 1.53
PRKCD-202ENST00000394729 CTSWP56202 376 aa24.61■■□□□ 1.53
PRKCD-202ENST00000394729 SEPT12Q8IYM1 358 aa24.61■■□□□ 1.53
PRKCD-202ENST00000394729 NUP188Q5SRE5 1749 aa24.6■■□□□ 1.53
PRKCD-202ENST00000394729 ST18O60284 1047 aa24.6■■□□□ 1.53
PRKCD-202ENST00000394729 TAF5LO75529 589 aa24.6■■□□□ 1.53
PRKCD-202ENST00000394729 MYH14Q7Z406 1995 aaKnown RBP24.6■■□□□ 1.53
PRKCD-202ENST00000394729 SNX21Q969T3 373 aa24.6■■□□□ 1.53
PRKCD-202ENST00000394729 AK9Q5TCS8 1911 aa24.6■■□□□ 1.53
PRKCD-202ENST00000394729 GTF2E1P29083 439 aaPredicted RBP24.59■■□□□ 1.53
PRKCD-202ENST00000394729 LSG1Q9H089 658 aaKnown RBP24.59■■□□□ 1.53
PRKCD-202ENST00000394729 CCNL1Q9UK58 526 aaPredicted RBP24.59■■□□□ 1.53
PRKCD-202ENST00000394729 CAMTA2O94983 1202 aa24.59■■□□□ 1.53
PRKCD-202ENST00000394729 QTRT2Q9H974 415 aaKnown RBP24.59■■□□□ 1.53
PRKCD-202ENST00000394729 USP42Q9H9J4 1324 aaKnown RBP24.59■■□□□ 1.53
PRKCD-202ENST00000394729 PKP1Q13835 747 aa24.58■■□□□ 1.53
PRKCD-202ENST00000394729 TAF6LQ9Y6J9 622 aa24.58■■□□□ 1.53
PRKCD-202ENST00000394729 TRIM28Q13263 835 aaKnown RBP24.57■■□□□ 1.52
PRKCD-202ENST00000394729 SCARF1Q14162 830 aa24.57■■□□□ 1.52
PRKCD-202ENST00000394729 ADCK5Q3MIX3 580 aa24.57■■□□□ 1.52
PRKCD-202ENST00000394729 CHAMP1Q96JM3 812 aa24.57■■□□□ 1.52
PRKCD-202ENST00000394729 SRCAPQ6ZRS2 3230 aa24.57■■□□□ 1.52
PRKCD-202ENST00000394729 TJP1Q07157 1748 aa24.57■■□□□ 1.52
PRKCD-202ENST00000394729 ANKRD18BA2A2Z9 1011 aa24.57■■□□□ 1.52
PRKCD-202ENST00000394729 IFIT1P09914 478 aaKnown RBP24.57■■□□□ 1.52
PRKCD-202ENST00000394729 FOXD4L6Q3SYB3 417 aaPredicted RBP24.57■■□□□ 1.52
PRKCD-202ENST00000394729 FOXD4L3Q6VB84 417 aaPredicted RBP24.57■■□□□ 1.52
PRKCD-202ENST00000394729 COL15A1P39059 1388 aa24.56■■□□□ 1.52
PRKCD-202ENST00000394729 NPHP1O15259 732 aa24.56■■□□□ 1.52
PRKCD-202ENST00000394729 USPL1Q5W0Q7 1092 aa24.56■■□□□ 1.52
PRKCD-202ENST00000394729 ZNF34Q8IZ26 560 aa24.56■■□□□ 1.52
PRKCD-202ENST00000394729 SMARCC1Q92922 1105 aaPredicted RBP24.56■■□□□ 1.52
PRKCD-202ENST00000394729 XAGE2Q96GT9 111 aa24.56■■□□□ 1.52
PRKCD-202ENST00000394729 SPATA31A6Q5VVP1 1343 aa24.56■■□□□ 1.52
PRKCD-202ENST00000394729 WTIPA6NIX2 430 aaPredicted RBP24.55■■□□□ 1.52
PRKCD-202ENST00000394729 ATP5JP18859 108 aa24.55■■□□□ 1.52
PRKCD-202ENST00000394729 UTP14AQ9BVJ6 771 aaKnown RBP24.55■■□□□ 1.52
PRKCD-202ENST00000394729 SH3TC1Q8TE82 1336 aa24.55■■□□□ 1.52
PRKCD-202ENST00000394729 RAD50Q92878 1312 aa24.55■■□□□ 1.52
PRKCD-202ENST00000394729 RUFY2Q8WXA3 655 aa24.55■■□□□ 1.52
PRKCD-202ENST00000394729 CHMP5Q9NZZ3 219 aa24.55■■□□□ 1.52
PRKCD-202ENST00000394729 SNX14Q9Y5W7 946 aa24.55■■□□□ 1.52
PRKCD-202ENST00000394729 CASTP20810 708 aaKnown RBP24.54■■□□□ 1.52
PRKCD-202ENST00000394729 WNK3Q9BYP7 1800 aa24.54■■□□□ 1.52
PRKCD-202ENST00000394729 TTC39AQ5SRH9 613 aa24.54■■□□□ 1.52
PRKCD-202ENST00000394729 GZF1Q9H116 711 aaPredicted RBP24.54■■□□□ 1.52
PRKCD-202ENST00000394729 IQSEC3Q9UPP2 1182 aaPredicted RBP24.54■■□□□ 1.52
PRKCD-202ENST00000394729 PDE8AO60658 829 aa24.53■■□□□ 1.52
PRKCD-202ENST00000394729 HSPA4P34932 840 aa24.53■■□□□ 1.52
PRKCD-202ENST00000394729 C3orf67Q6ZVT6 689 aa24.53■■□□□ 1.52
PRKCD-202ENST00000394729 ERVV-1B6SEH8 477 aa24.53■■□□□ 1.52
PRKCD-202ENST00000394729 JAKMIP1Q96N16 626 aaKnown RBP24.53■■□□□ 1.52
PRKCD-202ENST00000394729 RBM8AQ9Y5S9 174 aaKnown RBP24.53■■□□□ 1.52
PRKCD-202ENST00000394729 TUBGCP6Q96RT7 1819 aa24.53■■□□□ 1.52
PRKCD-202ENST00000394729 CSF1RP07333 972 aa24.53■■□□□ 1.52
PRKCD-202ENST00000394729 PAG1Q9NWQ8 432 aa24.53■■□□□ 1.52
PRKCD-202ENST00000394729 SSFA2P28290 1259 aa24.52■■□□□ 1.52
PRKCD-202ENST00000394729 DEKP35659 375 aaKnown RBP24.52■■□□□ 1.52
PRKCD-202ENST00000394729 ATP2B3Q16720 1220 aa24.52■■□□□ 1.52
PRKCD-202ENST00000394729 ERFEQ4G0M1 354 aa24.52■■□□□ 1.52
PRKCD-202ENST00000394729 TPRNQ4KMQ1 711 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms