RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 COL5A3P25940 1745 aaPredicted RBP23.19■■□□□ 1.3
CLDND1-203ENST00000394181 NBR1Q14596 966 aa23.19■■□□□ 1.3
CLDND1-203ENST00000394181 BTAF1O14981 1849 aa23.19■■□□□ 1.3
CLDND1-203ENST00000394181 HCLS1P14317 486 aaPredicted RBP23.18■■□□□ 1.3
CLDND1-203ENST00000394181 IFIT5Q13325 482 aaKnown RBP23.18■■□□□ 1.3
CLDND1-203ENST00000394181 NEUROD6Q96NK8 337 aa23.18■■□□□ 1.3
CLDND1-203ENST00000394181 EVI5LQ96CN4 794 aa23.18■■□□□ 1.3
CLDND1-203ENST00000394181 SGSM2O43147 1006 aa23.17■■□□□ 1.3
CLDND1-203ENST00000394181 CIAO1O76071 339 aa23.17■■□□□ 1.3
CLDND1-203ENST00000394181 ITGA6P23229 1130 aa23.17■■□□□ 1.3
CLDND1-203ENST00000394181 AMIGO3Q86WK7 504 aa23.17■■□□□ 1.3
CLDND1-203ENST00000394181 SNX21Q969T3 373 aa23.17■■□□□ 1.3
CLDND1-203ENST00000394181 NIP7Q9Y221 180 aaKnown RBP eCLIP23.17■■□□□ 1.3
CLDND1-203ENST00000394181 PDE8AO60658 829 aa23.16■■□□□ 1.3
CLDND1-203ENST00000394181 ATP5JP18859 108 aa23.16■■□□□ 1.3
CLDND1-203ENST00000394181 HSCBQ8IWL3 235 aa23.16■■□□□ 1.3
CLDND1-203ENST00000394181 CCNL1Q9UK58 526 aaPredicted RBP23.16■■□□□ 1.3
CLDND1-203ENST00000394181 PALD1Q9ULE6 856 aa23.16■■□□□ 1.3
CLDND1-203ENST00000394181 AK9Q5TCS8 1911 aa23.16■■□□□ 1.3
CLDND1-203ENST00000394181 NHSQ6T4R5 1651 aa23.16■■□□□ 1.3
CLDND1-203ENST00000394181 TAF7LQ5H9L4 462 aa23.16■■□□□ 1.3
CLDND1-203ENST00000394181 UTP14AQ9BVJ6 771 aaKnown RBP23.15■■□□□ 1.3
CLDND1-203ENST00000394181 CNTNAP4Q9C0A0 1308 aa23.14■■□□□ 1.3
CLDND1-203ENST00000394181 ANTXR1Q9H6X2 564 aa23.14■■□□□ 1.3
CLDND1-203ENST00000394181 FAM227BQ96M60 508 aa23.14■■□□□ 1.29
CLDND1-203ENST00000394181 DIAPH3Q9NSV4 1193 aa23.14■■□□□ 1.29
CLDND1-203ENST00000394181 SH3TC1Q8TE82 1336 aa23.13■■□□□ 1.29
CLDND1-203ENST00000394181 ZNF831Q5JPB2 1677 aa23.13■■□□□ 1.29
CLDND1-203ENST00000394181 A0A1B0GUL7 405 aa23.13■■□□□ 1.29
CLDND1-203ENST00000394181 GPR108Q9NPR9 543 aa23.13■■□□□ 1.29
CLDND1-203ENST00000394181 CEP126Q9P2H0 1117 aa23.13■■□□□ 1.29
CLDND1-203ENST00000394181 NTSR2O95665 410 aa23.13■■□□□ 1.29
CLDND1-203ENST00000394181 RIPOR2Q9Y4F9 1068 aa23.13■■□□□ 1.29
CLDND1-203ENST00000394181 GNPATO15228 680 aa23.12■■□□□ 1.29
CLDND1-203ENST00000394181 CHGBP05060 677 aa23.12■■□□□ 1.29
CLDND1-203ENST00000394181 RABEP1Q15276 862 aa23.12■■□□□ 1.29
CLDND1-203ENST00000394181 LDHAL6AQ6ZMR3 332 aa23.12■■□□□ 1.29
CLDND1-203ENST00000394181 DNAJC2Q99543 621 aaKnown RBP23.12■■□□□ 1.29
CLDND1-203ENST00000394181 LSG1Q9H089 658 aaKnown RBP23.12■■□□□ 1.29
CLDND1-203ENST00000394181 BCL2L12Q9HB09 334 aa23.12■■□□□ 1.29
CLDND1-203ENST00000394181 SRP68Q9UHB9 627 aaKnown RBP23.12■■□□□ 1.29
CLDND1-203ENST00000394181 ANKRD18BA2A2Z9 1011 aa23.11■■□□□ 1.29
CLDND1-203ENST00000394181 ADORA1P30542 326 aa23.11■■□□□ 1.29
CLDND1-203ENST00000394181 ZNF609O15014 1411 aa23.11■■□□□ 1.29
CLDND1-203ENST00000394181 PARP10Q53GL7 1025 aa23.11■■□□□ 1.29
CLDND1-203ENST00000394181 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
CLDND1-203ENST00000394181 BICDL1Q6ZP65 573 aa23.11■■□□□ 1.29
CLDND1-203ENST00000394181 FSD1Q9BTV5 496 aa23.11■■□□□ 1.29
CLDND1-203ENST00000394181 RPS6KA4O75676 772 aa23.1■■□□□ 1.29
CLDND1-203ENST00000394181 NMIQ13287 307 aaPredicted RBP23.1■■□□□ 1.29
CLDND1-203ENST00000394181 HAUS7Q99871 368 aa23.1■■□□□ 1.29
CLDND1-203ENST00000394181 SEC31BQ9NQW1 1179 aa23.1■■□□□ 1.29
CLDND1-203ENST00000394181 LRRC4BQ9NT99 713 aa23.1■■□□□ 1.29
CLDND1-203ENST00000394181 SBF2Q86WG5 1849 aa23.09■■□□□ 1.29
CLDND1-203ENST00000394181 PTH1RQ03431 593 aa23.09■■□□□ 1.29
CLDND1-203ENST00000394181 USPL1Q5W0Q7 1092 aa23.09■■□□□ 1.29
CLDND1-203ENST00000394181 BCL11BQ9C0K0 894 aaPredicted RBP23.09■■□□□ 1.29
CLDND1-203ENST00000394181 FBXO3Q9UK99 471 aa23.09■■□□□ 1.29
CLDND1-203ENST00000394181 ZNF652Q9Y2D9 606 aa23.09■■□□□ 1.29
CLDND1-203ENST00000394181 A0A0D9SFI3 127 aa23.08■■□□□ 1.29
CLDND1-203ENST00000394181 TBC1D9BQ66K14 1250 aa23.08■■□□□ 1.29
CLDND1-203ENST00000394181 CLEC4GQ6UXB4 293 aa23.08■■□□□ 1.29
CLDND1-203ENST00000394181 RIC1Q4ADV7 1423 aa23.08■■□□□ 1.29
CLDND1-203ENST00000394181 METTL24Q5JXM2 366 aa23.08■■□□□ 1.29
CLDND1-203ENST00000394181 DDX46Q7L014 1031 aaKnown RBP23.08■■□□□ 1.29
CLDND1-203ENST00000394181 CNNM1Q9NRU3 951 aa23.08■■□□□ 1.29
CLDND1-203ENST00000394181 XAGE2Q96GT9 111 aa23.07■■□□□ 1.28
CLDND1-203ENST00000394181 FOXD4L1Q9NU39 408 aa23.07■■□□□ 1.28
CLDND1-203ENST00000394181 RAD50Q92878 1312 aa23.07■■□□□ 1.28
CLDND1-203ENST00000394181 K7ELQ4 463 aaPredicted RBP23.06■■□□□ 1.28
CLDND1-203ENST00000394181 HSPA4P34932 840 aa23.06■■□□□ 1.28
CLDND1-203ENST00000394181 ERFEQ4G0M1 354 aa23.06■■□□□ 1.28
CLDND1-203ENST00000394181 C3orf67Q6ZVT6 689 aa23.06■■□□□ 1.28
CLDND1-203ENST00000394181 KRT27Q7Z3Y8 459 aa23.06■■□□□ 1.28
CLDND1-203ENST00000394181 RUFY2Q8WXA3 655 aa23.06■■□□□ 1.28
CLDND1-203ENST00000394181 AK7Q96M32 723 aa23.06■■□□□ 1.28
CLDND1-203ENST00000394181 NARFQ9UHQ1 456 aa23.06■■□□□ 1.28
CLDND1-203ENST00000394181 HELBQ8NG08 1087 aaPredicted RBP23.06■■□□□ 1.28
CLDND1-203ENST00000394181 ARHGEF1Q92888 912 aaKnown RBP23.06■■□□□ 1.28
CLDND1-203ENST00000394181 MYH3P11055 1940 aa23.06■■□□□ 1.28
CLDND1-203ENST00000394181 BCORQ6W2J9 1755 aa23.05■■□□□ 1.28
CLDND1-203ENST00000394181 GOLIM4O00461 696 aa23.05■■□□□ 1.28
CLDND1-203ENST00000394181 MCCP23508 829 aa23.05■■□□□ 1.28
CLDND1-203ENST00000394181 SLFNL1Q499Z3 407 aa23.05■■□□□ 1.28
CLDND1-203ENST00000394181 KIAA1211Q6ZU35 1233 aa23.05■■□□□ 1.28
CLDND1-203ENST00000394181 VGLL2Q8N8G2 317 aa23.05■■□□□ 1.28
CLDND1-203ENST00000394181 AKAP2Q9Y2D5 859 aa23.05■■□□□ 1.28
CLDND1-203ENST00000394181 RTCBQ9Y3I0 505 aaKnown RBP23.05■■□□□ 1.28
CLDND1-203ENST00000394181 PHF14O94880 888 aa23.04■■□□□ 1.28
CLDND1-203ENST00000394181 TRIM37O94972 964 aa23.04■■□□□ 1.28
CLDND1-203ENST00000394181 RASEFQ8IZ41 740 aa23.04■■□□□ 1.28
CLDND1-203ENST00000394181 NEK4P51957 841 aa23.03■■□□□ 1.28
CLDND1-203ENST00000394181 FAM196AQ6ZSG2 479 aa23.03■■□□□ 1.28
CLDND1-203ENST00000394181 ZNF589Q86UQ0 364 aaPredicted RBP23.03■■□□□ 1.28
CLDND1-203ENST00000394181 LY75O60449 1722 aa23.03■■□□□ 1.28
CLDND1-203ENST00000394181 SNAP23O00161 211 aa23.03■■□□□ 1.28
CLDND1-203ENST00000394181 IFIT1P09914 478 aaKnown RBP23.03■■□□□ 1.28
CLDND1-203ENST00000394181 SCARF1Q14162 830 aa23.03■■□□□ 1.28
CLDND1-203ENST00000394181 ATP2B3Q16720 1220 aa23.03■■□□□ 1.28
CLDND1-203ENST00000394181 SNRKQ9NRH2 765 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms