RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 ACTN2P35609 894 aa18.53■□□□□ 0.56
TFAP2B-202ENST00000393655 IFI16Q16666 785 aaKnown RBP18.53■□□□□ 0.56
TFAP2B-202ENST00000393655 EYA3Q99504 573 aa18.53■□□□□ 0.56
TFAP2B-202ENST00000393655 TMCO5BA8MYB1 307 aa18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 F8W031 263 aaPredicted RBP18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 TNNT1P13805 278 aa18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 GRM1Q13255 1194 aa18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 AKAP4Q5JQC9 854 aa18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 UQCRHLA0A096LP55 91 aa18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 UQCRHP07919 91 aa18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 PLCG2P16885 1265 aa18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 MAP3K9P80192 1104 aa18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 NCBP1Q09161 790 aaKnown RBP18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 NEMFO60524 1076 aa18.52■□□□□ 0.56
TFAP2B-202ENST00000393655 SHTN1A0MZ66 631 aa18.52■□□□□ 0.55
TFAP2B-202ENST00000393655 TRIM27P14373 513 aa18.52■□□□□ 0.55
TFAP2B-202ENST00000393655 SMARCC2Q8TAQ2 1214 aa18.52■□□□□ 0.55
TFAP2B-202ENST00000393655 CPLX3Q8WVH0 158 aa18.52■□□□□ 0.55
TFAP2B-202ENST00000393655 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.55
TFAP2B-202ENST00000393655 TPTE2Q6XPS3 522 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 GSDMDP57764 484 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 PICALMQ13492 652 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 KIF18AQ8NI77 898 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 CCDC102BQ68D86 513 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 XAGE3Q8WTP9 111 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 SYNCQ9H7C4 482 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 ALDH1L1O75891 902 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 KRT13P13646 458 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 RBM10P98175 930 aaKnown RBP18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 WDR97A6NE52 1622 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 IL2RBP14784 551 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 DNA2P51530 1060 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 PDCL2Q8N4E4 241 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 TFCP2L1Q9NZI6 479 aa18.51■□□□□ 0.55
TFAP2B-202ENST00000393655 UHRF1BP1LA0JNW5 1464 aa18.5■□□□□ 0.55
TFAP2B-202ENST00000393655 LMOD1P29536 600 aaPredicted RBP18.5■□□□□ 0.55
TFAP2B-202ENST00000393655 LMAN1P49257 510 aa18.5■□□□□ 0.55
TFAP2B-202ENST00000393655 DDX12PQ92771 950 aa18.5■□□□□ 0.55
TFAP2B-202ENST00000393655 IL15P40933 162 aaPredicted RBP18.5■□□□□ 0.55
TFAP2B-202ENST00000393655 ZBTB43O43298 467 aa18.5■□□□□ 0.55
TFAP2B-202ENST00000393655 PHACTR2O75167 634 aa18.5■□□□□ 0.55
TFAP2B-202ENST00000393655 ZSCAN16Q9H4T2 348 aaPredicted RBP18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 VEZTQ9HBM0 779 aa18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 CHPF2Q9P2E5 772 aa18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 POTEB2H3BUK9 544 aa18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 URI1O94763 535 aaPredicted RBP18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 ZC3H12CQ9C0D7 883 aaKnown RBP18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 NOP2P46087 812 aaKnown RBP18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 HEATR3Q7Z4Q2 680 aa18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 ANKRD2Q9GZV1 360 aa18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 RTN1Q16799 776 aa18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
TFAP2B-202ENST00000393655 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 GNAT2P19087 354 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 TRIM47Q96LD4 638 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 MAGEB6P1A0A0J9YX57 407 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 KLF18A0A0U1RQI7 1052 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 PLVAPQ9BX97 442 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 WDR7Q9Y4E6 1490 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 RBM25P49756 843 aaKnown RBP18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 RHPN1Q8TCX5 695 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 TTC12Q9H892 705 aaPredicted RBP18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 C6orf50Q9HD87 102 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 GOLGA6L9A6NEM1 432 aa18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 JARID2Q92833 1246 aaPredicted RBP18.48■□□□□ 0.55
TFAP2B-202ENST00000393655 KIF4AO95239 1232 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 CALM1P0DP23 149 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 CALM2P0DP24 149 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 CALM3P0DP25 149 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 FERP16591 822 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 RBM27Q9P2N5 1060 aaKnown RBP18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 TNNI2P48788 182 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 PRPF4BQ13523 1007 aaKnown RBP18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 CCDC184Q52MB2 194 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 TTC22Q5TAA0 569 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 SIRT1Q96EB6 747 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 PPIP5K1Q6PFW1 1433 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 FAM83GA6ND36 823 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 PLS1Q14651 629 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 RTL9Q8NET4 1388 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 STAT6P42226 847 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 NAPAP54920 295 aa18.47■□□□□ 0.55
TFAP2B-202ENST00000393655 EHBP1Q8NDI1 1231 aa18.46■□□□□ 0.55
TFAP2B-202ENST00000393655 RBM17Q96I25 401 aaKnown RBP18.46■□□□□ 0.55
TFAP2B-202ENST00000393655 IMPG2Q9BZV3 1241 aa18.46■□□□□ 0.55
TFAP2B-202ENST00000393655 MMRN2Q9H8L6 949 aa18.46■□□□□ 0.55
TFAP2B-202ENST00000393655 RALGAPBQ86X10 1494 aa18.46■□□□□ 0.55
TFAP2B-202ENST00000393655 KSR2Q6VAB6 950 aa18.46■□□□□ 0.55
TFAP2B-202ENST00000393655 ZNF354CQ86Y25 554 aa18.46■□□□□ 0.55
TFAP2B-202ENST00000393655 ARHGAP45Q92619 1136 aa18.46■□□□□ 0.55
TFAP2B-202ENST00000393655 UBE4AQ14139 1066 aa18.45■□□□□ 0.54
TFAP2B-202ENST00000393655 BMP2KLQ5H9B9 411 aa18.45■□□□□ 0.54
TFAP2B-202ENST00000393655 TMC6Q7Z403 805 aa18.45■□□□□ 0.54
TFAP2B-202ENST00000393655 RAB11FIP4Q86YS3 637 aa18.45■□□□□ 0.54
TFAP2B-202ENST00000393655 PANK2Q9BZ23 570 aa18.45■□□□□ 0.54
TFAP2B-202ENST00000393655 BCCIPQ9P287 314 aaKnown RBP eCLIP18.45■□□□□ 0.54
TFAP2B-202ENST00000393655 GRM8O00222 908 aa18.45■□□□□ 0.54
TFAP2B-202ENST00000393655 BIN1O00499 593 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms