RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CELF1Q92879 486 aaKnown RBP9.79□□□□□ -0.84
HMGB3P1-201ENST00000393368 CRAMP1Q96RY5 1269 aa9.79□□□□□ -0.84
HMGB3P1-201ENST00000393368 GPBP1L1Q9HC44 474 aaPredicted RBP9.79□□□□□ -0.84
HMGB3P1-201ENST00000393368 SEC31BQ9NQW1 1179 aa9.79□□□□□ -0.84
HMGB3P1-201ENST00000393368 SNED1Q8TER0 1413 aa9.79□□□□□ -0.84
HMGB3P1-201ENST00000393368 FKBP4Q02790 459 aaKnown RBP eCLIP9.78□□□□□ -0.84
HMGB3P1-201ENST00000393368 SOGA3Q5TF21 947 aa9.78□□□□□ -0.84
HMGB3P1-201ENST00000393368 SLC4A10Q6U841 1118 aa9.78□□□□□ -0.84
HMGB3P1-201ENST00000393368 DDX46Q7L014 1031 aaKnown RBP9.78□□□□□ -0.84
HMGB3P1-201ENST00000393368 UBE3BQ7Z3V4 1068 aa9.78□□□□□ -0.84
HMGB3P1-201ENST00000393368 NMRK2Q9NPI5 230 aa9.78□□□□□ -0.84
HMGB3P1-201ENST00000393368 TIAM2Q8IVF5 1701 aa9.78□□□□□ -0.84
HMGB3P1-201ENST00000393368 FER1L6Q2WGJ9 1857 aa9.78□□□□□ -0.84
HMGB3P1-201ENST00000393368 ATXN8OSP0DMR3 200 aa9.77□□□□□ -0.85
HMGB3P1-201ENST00000393368 GRAPQ13588 217 aa9.77□□□□□ -0.85
HMGB3P1-201ENST00000393368 GCKRQ14397 625 aa9.77□□□□□ -0.85
HMGB3P1-201ENST00000393368 SF3B3Q15393 1217 aaKnown RBP9.77□□□□□ -0.85
HMGB3P1-201ENST00000393368 BEND3Q5T5X7 828 aa9.77□□□□□ -0.85
HMGB3P1-201ENST00000393368 GRAPLQ8TC17 118 aaPredicted RBP9.77□□□□□ -0.85
HMGB3P1-201ENST00000393368 ATP6V0A2Q9Y487 856 aa9.77□□□□□ -0.85
HMGB3P1-201ENST00000393368 LTBP3Q9NS15 1303 aa9.77□□□□□ -0.85
HMGB3P1-201ENST00000393368 COL4A5P29400 1685 aa9.77□□□□□ -0.85
HMGB3P1-201ENST00000393368 H7C1W4 665 aa9.76□□□□□ -0.85
HMGB3P1-201ENST00000393368 PDE8AO60658 829 aa9.76□□□□□ -0.85
HMGB3P1-201ENST00000393368 CTSWP56202 376 aa9.76□□□□□ -0.85
HMGB3P1-201ENST00000393368 RTKN2Q8IZC4 609 aa9.76□□□□□ -0.85
HMGB3P1-201ENST00000393368 LINS1Q8NG48 757 aa9.76□□□□□ -0.85
HMGB3P1-201ENST00000393368 SMC4Q9NTJ3 1288 aa9.76□□□□□ -0.85
HMGB3P1-201ENST00000393368 SBF1O95248 1867 aa9.76□□□□□ -0.85
HMGB3P1-201ENST00000393368 TAF1P21675 1872 aa9.76□□□□□ -0.85
HMGB3P1-201ENST00000393368 CDHR2Q9BYE9 1310 aa9.76□□□□□ -0.85
HMGB3P1-201ENST00000393368 KIF3CO14782 793 aa9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 BBOX1O75936 387 aa9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 IARSP41252 1262 aaKnown RBP9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 CASP7P55210 303 aa9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 POLA2Q14181 598 aa9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 CCDC152Q4G0S7 254 aa9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 GPR101Q96P66 508 aaPredicted RBP9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 GREM2Q9H772 168 aa9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 RRAGCQ9HB90 399 aa9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 ZNF541Q9H0D2 1346 aa9.75□□□□□ -0.85
HMGB3P1-201ENST00000393368 GPSM2P81274 684 aa9.74□□□□□ -0.85
HMGB3P1-201ENST00000393368 AOC3Q16853 763 aa9.74□□□□□ -0.85
HMGB3P1-201ENST00000393368 FAM161AQ3B820 660 aa9.74□□□□□ -0.85
HMGB3P1-201ENST00000393368 CC2D2BQ6DHV5 1058 aa9.74□□□□□ -0.85
HMGB3P1-201ENST00000393368 DPP8Q6V1X1 898 aaPredicted RBP9.74□□□□□ -0.85
HMGB3P1-201ENST00000393368 SP8Q8IXZ3 490 aa9.74□□□□□ -0.85
HMGB3P1-201ENST00000393368 TTLL11Q8NHH1 800 aa9.74□□□□□ -0.85
HMGB3P1-201ENST00000393368 PSMD1Q99460 953 aa9.74□□□□□ -0.85
HMGB3P1-201ENST00000393368 DUOX1Q9NRD9 1551 aa9.74□□□□□ -0.85
HMGB3P1-201ENST00000393368 GLTPD2A6NH11 291 aa9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 PPIP5K2O43314 1243 aa9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 DDNO94850 711 aaPredicted RBP9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 RPS8P62241 208 aaKnown RBP9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 ALDH1L2Q3SY69 923 aa9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 EPHA10Q5JZY3 1008 aa9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 LARGE2Q8N3Y3 721 aa9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 MPNDQ8N594 471 aa9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 SRCIN1Q9C0H9 1055 aa9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 TMX4Q9H1E5 349 aaPredicted RBP9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 NOB1Q9ULX3 412 aaKnown RBP9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
HMGB3P1-201ENST00000393368 WTIPA6NIX2 430 aaPredicted RBP9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 GRM8O00222 908 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 BCAR3O75815 825 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 HSP90B1P14625 803 aaKnown RBP9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 RARSP54136 660 aaKnown RBP9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 C1QTNF8P60827 252 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 FOXO4P98177 505 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 C9orf78Q9NZ63 289 aaPredicted RBP9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 TNNQ9UQP3 1299 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 CHMP3Q9Y3E7 222 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 LRRC37AA6NMS7 1700 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 PTPRCP08575 1304 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 ZBED9Q6R2W3 1325 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 CCDC88AQ3V6T2 1871 aa9.72□□□□□ -0.85
HMGB3P1-201ENST00000393368 POTECB2RU33 542 aa9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 RIMBP2O15034 1052 aa9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 ALDH1L1O75891 902 aa9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 CT47B1P0C2W7 299 aaPredicted RBP9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 ITGA6P23229 1130 aa9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 ANKRD18AQ8IVF6 992 aa9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 SUCLG2Q96I99 432 aa9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 PLA2G12BQ9BX93 195 aa9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 RTFDC1Q9BY42 306 aaPredicted RBP9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 POLLQ9UGP5 575 aa9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 GJA3Q9Y6H8 435 aa9.71□□□□□ -0.86
HMGB3P1-201ENST00000393368 C6orf229H3BNL8 230 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 FZD9O00144 591 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 UFL1O94874 794 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 CSF1RP07333 972 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 DPY19L2Q6NUT2 758 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 LMBR1LQ6UX01 489 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 TMC4Q7Z404 712 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 NIM1KQ8IY84 436 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 TBC1D16Q8TBP0 767 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 JDP2Q8WYK2 163 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms