RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 CNTNAP1P78357 1384 aa10.79□□□□□ -0.68
CASP4-201ENST00000393150 TM4SF1P30408 202 aa10.79□□□□□ -0.68
CASP4-201ENST00000393150 PDE6BP35913 854 aa10.79□□□□□ -0.68
CASP4-201ENST00000393150 DDR1Q08345 913 aa10.79□□□□□ -0.68
CASP4-201ENST00000393150 TMEM134Q9H6X4 195 aa10.79□□□□□ -0.68
CASP4-201ENST00000393150 RABGEF1Q9UJ41 708 aa10.79□□□□□ -0.68
CASP4-201ENST00000393150 DNAJB2P25686 324 aa10.78□□□□□ -0.68
CASP4-201ENST00000393150 USPL1Q5W0Q7 1092 aa10.78□□□□□ -0.68
CASP4-201ENST00000393150 ZNF530Q6P9A1 599 aaPredicted RBP10.78□□□□□ -0.68
CASP4-201ENST00000393150 VPS9D1Q9Y2B5 631 aa10.78□□□□□ -0.68
CASP4-201ENST00000393150 SERPINB2P05120 415 aa10.77□□□□□ -0.69
CASP4-201ENST00000393150 VEGFBP49765 207 aa10.77□□□□□ -0.69
CASP4-201ENST00000393150 DEFB115Q30KQ5 88 aa10.77□□□□□ -0.69
CASP4-201ENST00000393150 EAPPQ56P03 285 aaPredicted RBP10.77□□□□□ -0.69
CASP4-201ENST00000393150 TAOK3Q9H2K8 898 aa10.77□□□□□ -0.69
CASP4-201ENST00000393150 WBP1LQ9NX94 342 aa10.77□□□□□ -0.69
CASP4-201ENST00000393150 ABT1Q9ULW3 272 aaKnown RBP10.77□□□□□ -0.69
CASP4-201ENST00000393150 MAP2P11137 1827 aaKnown RBP10.76□□□□□ -0.69
CASP4-201ENST00000393150 KDRP35968 1356 aa10.76□□□□□ -0.69
CASP4-201ENST00000393150 A0A087WZG4 1122 aa10.76□□□□□ -0.69
CASP4-201ENST00000393150 PNMA8AQ86V59 439 aaPredicted RBP10.76□□□□□ -0.69
CASP4-201ENST00000393150 NFATC2IPQ8NCF5 419 aa10.76□□□□□ -0.69
CASP4-201ENST00000393150 SLC4A9Q96Q91 983 aa10.76□□□□□ -0.69
CASP4-201ENST00000393150 TESK2Q96S53 571 aa10.76□□□□□ -0.69
CASP4-201ENST00000393150 GOPCQ9HD26 462 aa10.76□□□□□ -0.69
CASP4-201ENST00000393150 KDM6AO15550 1401 aaPredicted RBP10.75□□□□□ -0.69
CASP4-201ENST00000393150 C21orf2O43822 256 aa10.75□□□□□ -0.69
CASP4-201ENST00000393150 ECE1P42892 770 aa10.75□□□□□ -0.69
CASP4-201ENST00000393150 CNKSR1Q969H4 720 aa10.75□□□□□ -0.69
CASP4-201ENST00000393150 NARFQ9UHQ1 456 aa10.75□□□□□ -0.69
CASP4-201ENST00000393150 TIMELESSQ9UNS1 1208 aa10.75□□□□□ -0.69
CASP4-201ENST00000393150 SBF1O95248 1867 aa10.74□□□□□ -0.69
CASP4-201ENST00000393150 BRCA1P38398 1863 aaKnown RBP10.74□□□□□ -0.69
CASP4-201ENST00000393150 KIAA1551Q9HCM1 1747 aa10.74□□□□□ -0.69
CASP4-201ENST00000393150 POTECB2RU33 542 aa10.74□□□□□ -0.69
CASP4-201ENST00000393150 BHMG1C9JSJ3 638 aaPredicted RBP10.74□□□□□ -0.69
CASP4-201ENST00000393150 NFKBIEO00221 500 aa10.74□□□□□ -0.69
CASP4-201ENST00000393150 DDNO94850 711 aaPredicted RBP10.74□□□□□ -0.69
CASP4-201ENST00000393150 NFIXQ14938 502 aa10.74□□□□□ -0.69
CASP4-201ENST00000393150 SEPT9Q9UHD8 586 aaPredicted RBP10.74□□□□□ -0.69
CASP4-201ENST00000393150 STARD3NLO95772 234 aa10.73□□□□□ -0.69
CASP4-201ENST00000393150 CD46P15529 392 aa10.73□□□□□ -0.69
CASP4-201ENST00000393150 BICDL1Q6ZP65 573 aa10.73□□□□□ -0.69
CASP4-201ENST00000393150 BRIP1Q9BX63 1249 aa10.73□□□□□ -0.69
CASP4-201ENST00000393150 HACL1Q9UJ83 578 aa10.73□□□□□ -0.69
CASP4-201ENST00000393150 HSPA8P11142 646 aaKnown RBP10.72□□□□□ -0.69
CASP4-201ENST00000393150 TNNT2P45379 298 aaPredicted RBP10.72□□□□□ -0.69
CASP4-201ENST00000393150 ST5P78524 1137 aa10.72□□□□□ -0.69
CASP4-201ENST00000393150 EIF4A2Q14240 407 aaKnown RBP10.72□□□□□ -0.69
CASP4-201ENST00000393150 SH3D19Q5HYK7 790 aa10.72□□□□□ -0.69
CASP4-201ENST00000393150 INTS5Q6P9B9 1019 aaKnown RBP10.72□□□□□ -0.69
CASP4-201ENST00000393150 TAF1DQ9H5J8 278 aaPredicted RBP10.72□□□□□ -0.69
CASP4-201ENST00000393150 PASKQ96RG2 1323 aa10.71□□□□□ -0.69
CASP4-201ENST00000393150 WDR33Q9C0J8 1336 aaKnown RBP10.71□□□□□ -0.69
CASP4-201ENST00000393150 LTBP3Q9NS15 1303 aa10.71□□□□□ -0.69
CASP4-201ENST00000393150 NCAPD2Q15021 1401 aa10.71□□□□□ -0.69
CASP4-201ENST00000393150 TK2O00142 265 aa10.71□□□□□ -0.69
CASP4-201ENST00000393150 RGS19P49795 217 aa10.71□□□□□ -0.69
CASP4-201ENST00000393150 CNTROBQ8N137 903 aa10.71□□□□□ -0.69
CASP4-201ENST00000393150 POLKQ9UBT6 870 aa10.71□□□□□ -0.69
CASP4-201ENST00000393150 ZNF831Q5JPB2 1677 aa10.71□□□□□ -0.7
CASP4-201ENST00000393150 SOS1Q07889 1333 aaPredicted RBP10.7□□□□□ -0.7
CASP4-201ENST00000393150 RASSF10A6NK89 507 aa10.7□□□□□ -0.7
CASP4-201ENST00000393150 CA12O43570 354 aa10.7□□□□□ -0.7
CASP4-201ENST00000393150 LMOD1P29536 600 aaPredicted RBP10.7□□□□□ -0.7
CASP4-201ENST00000393150 GRM1Q13255 1194 aa10.7□□□□□ -0.7
CASP4-201ENST00000393150 DNAJC10Q8IXB1 793 aa10.7□□□□□ -0.7
CASP4-201ENST00000393150 TTC5Q8N0Z6 440 aa10.7□□□□□ -0.7
CASP4-201ENST00000393150 SETDB2Q96T68 719 aa10.7□□□□□ -0.7
CASP4-201ENST00000393150 KRTAP3-3Q9BYR6 98 aa10.7□□□□□ -0.7
CASP4-201ENST00000393150 KRTAP3-2Q9BYR7 98 aa10.7□□□□□ -0.7
CASP4-201ENST00000393150 DDX11L8A8MPP1 907 aa10.69□□□□□ -0.7
CASP4-201ENST00000393150 CYP19A1P11511 503 aaPredicted RBP10.69□□□□□ -0.7
CASP4-201ENST00000393150 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
CASP4-201ENST00000393150 EPHX2P34913 555 aa10.69□□□□□ -0.7
CASP4-201ENST00000393150 LSM11P83369 360 aaKnown RBP eCLIP10.69□□□□□ -0.7
CASP4-201ENST00000393150 SWT1Q5T5J6 900 aaKnown RBP10.69□□□□□ -0.7
CASP4-201ENST00000393150 STYK1Q6J9G0 422 aa10.69□□□□□ -0.7
CASP4-201ENST00000393150 JDP2Q8WYK2 163 aa10.69□□□□□ -0.7
CASP4-201ENST00000393150 TEX13AQ9BXU3 409 aaPredicted RBP10.69□□□□□ -0.7
CASP4-201ENST00000393150 COL15A1P39059 1388 aa10.69□□□□□ -0.7
CASP4-201ENST00000393150 SKIV2LQ15477 1246 aaKnown RBP10.68□□□□□ -0.7
CASP4-201ENST00000393150 CCDC93Q567U6 631 aa10.68□□□□□ -0.7
CASP4-201ENST00000393150 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
CASP4-201ENST00000393150 MYSM1Q5VVJ2 828 aa10.68□□□□□ -0.7
CASP4-201ENST00000393150 RTKN2Q8IZC4 609 aa10.68□□□□□ -0.7
CASP4-201ENST00000393150 CNBD1Q8NA66 436 aa10.68□□□□□ -0.7
CASP4-201ENST00000393150 MASTLQ96GX5 879 aa10.68□□□□□ -0.7
CASP4-201ENST00000393150 GPR101Q96P66 508 aaPredicted RBP10.68□□□□□ -0.7
CASP4-201ENST00000393150 ZNF330Q9Y3S2 320 aaPredicted RBP10.68□□□□□ -0.7
CASP4-201ENST00000393150 HRO43593 1189 aa10.67□□□□□ -0.7
CASP4-201ENST00000393150 ITGBL1O95965 494 aaPredicted RBP10.67□□□□□ -0.7
CASP4-201ENST00000393150 SULF1Q8IWU6 871 aa10.67□□□□□ -0.7
CASP4-201ENST00000393150 CAPNS2Q96L46 248 aa10.67□□□□□ -0.7
CASP4-201ENST00000393150 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
CASP4-201ENST00000393150 CARD14Q9BXL6 1004 aa10.67□□□□□ -0.7
CASP4-201ENST00000393150 TBC1D2Q9BYX2 928 aa10.67□□□□□ -0.7
CASP4-201ENST00000393150 CARMIL3Q8ND23 1372 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 KIF20BQ96Q89 1820 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 SLC10A3P09131 477 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms