RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 UTRNP46939 3433 aa16.95■□□□□ 0.3
PTN-202ENST00000393083 DLEC1Q9Y238 1755 aa16.94■□□□□ 0.3
PTN-202ENST00000393083 GCKRQ14397 625 aa16.94■□□□□ 0.3
PTN-202ENST00000393083 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
PTN-202ENST00000393083 STYK1Q6J9G0 422 aa16.94■□□□□ 0.3
PTN-202ENST00000393083 SKAP1Q86WV1 359 aa16.94■□□□□ 0.3
PTN-202ENST00000393083 MASTLQ96GX5 879 aa16.94■□□□□ 0.3
PTN-202ENST00000393083 NPR1P16066 1061 aa16.94■□□□□ 0.3
PTN-202ENST00000393083 GPR162Q16538 588 aa16.94■□□□□ 0.3
PTN-202ENST00000393083 DALRD3Q5D0E6 543 aaKnown RBP16.94■□□□□ 0.3
PTN-202ENST00000393083 JARID2Q92833 1246 aaPredicted RBP16.94■□□□□ 0.3
PTN-202ENST00000393083 NLRP3Q96P20 1036 aa16.94■□□□□ 0.3
PTN-202ENST00000393083 H7C1W4 665 aa16.93■□□□□ 0.3
PTN-202ENST00000393083 IRS4O14654 1257 aaPredicted RBP16.93■□□□□ 0.3
PTN-202ENST00000393083 GNAI3P08754 354 aa16.93■□□□□ 0.3
PTN-202ENST00000393083 TTLL6Q8N841 843 aa16.93■□□□□ 0.3
PTN-202ENST00000393083 ZNF622Q969S3 477 aaKnown RBP eCLIP16.93■□□□□ 0.3
PTN-202ENST00000393083 BCS1LQ9Y276 419 aa16.93■□□□□ 0.3
PTN-202ENST00000393083 CDHR2Q9BYE9 1310 aa16.92■□□□□ 0.3
PTN-202ENST00000393083 HOXA10P31260 410 aaPredicted RBP16.92■□□□□ 0.3
PTN-202ENST00000393083 CASP7P55210 303 aa16.92■□□□□ 0.3
PTN-202ENST00000393083 DDX60Q8IY21 1712 aaKnown RBP16.92■□□□□ 0.3
PTN-202ENST00000393083 ALDH1L1O75891 902 aa16.91■□□□□ 0.3
PTN-202ENST00000393083 GNAI2P04899 355 aa16.91■□□□□ 0.3
PTN-202ENST00000393083 CEP85Q6P2H3 762 aa16.91■□□□□ 0.3
PTN-202ENST00000393083 ANKRD44Q8N8A2 993 aa16.91■□□□□ 0.3
PTN-202ENST00000393083 SF3B3Q15393 1217 aaKnown RBP16.9■□□□□ 0.3
PTN-202ENST00000393083 SIRT2Q8IXJ6 389 aa16.9■□□□□ 0.3
PTN-202ENST00000393083 RPAP2Q8IXW5 612 aaPredicted RBP16.9■□□□□ 0.3
PTN-202ENST00000393083 SMC5Q8IY18 1101 aa16.9■□□□□ 0.3
PTN-202ENST00000393083 CNKSR1Q969H4 720 aa16.9■□□□□ 0.3
PTN-202ENST00000393083 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.3
PTN-202ENST00000393083 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.3
PTN-202ENST00000393083 UBE3BQ7Z3V4 1068 aa16.89■□□□□ 0.3
PTN-202ENST00000393083 USP44Q9H0E7 712 aa16.89■□□□□ 0.3
PTN-202ENST00000393083 GRIN3BO60391 1043 aa16.89■□□□□ 0.29
PTN-202ENST00000393083 PDE8AO60658 829 aa16.89■□□□□ 0.29
PTN-202ENST00000393083 HSP90B1P14625 803 aaKnown RBP16.89■□□□□ 0.29
PTN-202ENST00000393083 RGS3P49796 1198 aa16.89■□□□□ 0.29
PTN-202ENST00000393083 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.29
PTN-202ENST00000393083 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
PTN-202ENST00000393083 CRAMP1Q96RY5 1269 aa16.89■□□□□ 0.29
PTN-202ENST00000393083 LAMB2P55268 1798 aa16.89■□□□□ 0.29
PTN-202ENST00000393083 GRM8O00222 908 aa16.88■□□□□ 0.29
PTN-202ENST00000393083 ALDH1B1P30837 517 aa16.88■□□□□ 0.29
PTN-202ENST00000393083 C7orf43Q8WVR3 580 aa16.88■□□□□ 0.29
PTN-202ENST00000393083 GCC1Q96CN9 775 aa16.88■□□□□ 0.29
PTN-202ENST00000393083 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
PTN-202ENST00000393083 PLA2G12BQ9BX93 195 aa16.88■□□□□ 0.29
PTN-202ENST00000393083 TSHZ2Q9NRE2 1034 aa16.88■□□□□ 0.29
PTN-202ENST00000393083 SLX4Q8IY92 1834 aa16.87■□□□□ 0.29
PTN-202ENST00000393083 ARFGEF1Q9Y6D6 1849 aa16.87■□□□□ 0.29
PTN-202ENST00000393083 LRRFIP2Q9Y608 721 aaKnown RBP16.87■□□□□ 0.29
PTN-202ENST00000393083 UTYO14607 1347 aa16.86■□□□□ 0.29
PTN-202ENST00000393083 HMMRO75330 724 aa16.85■□□□□ 0.29
PTN-202ENST00000393083 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
PTN-202ENST00000393083 CTSWP56202 376 aa16.85■□□□□ 0.29
PTN-202ENST00000393083 C9orf78Q9NZ63 289 aaPredicted RBP16.85■□□□□ 0.29
PTN-202ENST00000393083 C21orf2O43822 256 aa16.85■□□□□ 0.29
PTN-202ENST00000393083 DDX46Q7L014 1031 aaKnown RBP16.85■□□□□ 0.29
PTN-202ENST00000393083 TTLL11Q8NHH1 800 aa16.85■□□□□ 0.29
PTN-202ENST00000393083 FOXO4P98177 505 aa16.84■□□□□ 0.29
PTN-202ENST00000393083 CACNB1Q02641 598 aaPredicted RBP16.84■□□□□ 0.29
PTN-202ENST00000393083 CCDC152Q4G0S7 254 aa16.84■□□□□ 0.29
PTN-202ENST00000393083 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
PTN-202ENST00000393083 CSF1RP07333 972 aa16.83■□□□□ 0.28
PTN-202ENST00000393083 NUCB1Q02818 461 aa16.83■□□□□ 0.28
PTN-202ENST00000393083 GRAPQ13588 217 aa16.83■□□□□ 0.28
PTN-202ENST00000393083 EPHA10Q5JZY3 1008 aa16.83■□□□□ 0.28
PTN-202ENST00000393083 ARHGAP27Q6ZUM4 889 aa16.83■□□□□ 0.28
PTN-202ENST00000393083 GRAPLQ8TC17 118 aaPredicted RBP16.83■□□□□ 0.28
PTN-202ENST00000393083 KAZALD1Q96I82 304 aa16.83■□□□□ 0.28
PTN-202ENST00000393083 SEC31BQ9NQW1 1179 aa16.83■□□□□ 0.28
PTN-202ENST00000393083 COL4A1P02462 1669 aa16.83■□□□□ 0.28
PTN-202ENST00000393083 RTL9Q8NET4 1388 aa16.82■□□□□ 0.28
PTN-202ENST00000393083 BBOX1O75936 387 aa16.82■□□□□ 0.28
PTN-202ENST00000393083 ATP8B2P98198 1209 aa16.82■□□□□ 0.28
PTN-202ENST00000393083 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
PTN-202ENST00000393083 SLC51AQ86UW1 340 aa16.82■□□□□ 0.28
PTN-202ENST00000393083 CELF1Q92879 486 aaKnown RBP16.82■□□□□ 0.28
PTN-202ENST00000393083 CCDC85AQ96PX6 553 aaPredicted RBP16.82■□□□□ 0.28
PTN-202ENST00000393083 DCTPP1Q9H773 170 aa16.82■□□□□ 0.28
PTN-202ENST00000393083 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
PTN-202ENST00000393083 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
PTN-202ENST00000393083 CHD1LQ86WJ1 897 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 SUCLG2Q96I99 432 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 GREM2Q9H772 168 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 HDAC5Q9UQL6 1122 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 SNED1Q8TER0 1413 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 PNMA6EA0A0J9YXQ4 647 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 NFKBIEO00221 500 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 SOGA3Q5TF21 947 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 LNPKQ9C0E8 428 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 ATP6V0A2Q9Y487 856 aa16.81■□□□□ 0.28
PTN-202ENST00000393083 TAF1P21675 1872 aa16.8■□□□□ 0.28
PTN-202ENST00000393083 PDE4AP27815 886 aa16.8■□□□□ 0.28
PTN-202ENST00000393083 RPS8P62241 208 aaKnown RBP16.8■□□□□ 0.28
PTN-202ENST00000393083 MYH3P11055 1940 aa16.79■□□□□ 0.28
PTN-202ENST00000393083 CCDC93Q567U6 631 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms