RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 FOXO4P98177 505 aa22.05■■□□□ 1.12
TRAF3-203ENST00000392745 PTPN12Q05209 780 aaKnown RBP22.05■■□□□ 1.12
TRAF3-203ENST00000392745 CSPP1Q1MSJ5 1256 aa22.05■■□□□ 1.12
TRAF3-203ENST00000392745 EAF2Q96CJ1 260 aaPredicted RBP22.05■■□□□ 1.12
TRAF3-203ENST00000392745 ACSBG1Q96GR2 724 aa22.05■■□□□ 1.12
TRAF3-203ENST00000392745 COPRSQ9NQ92 184 aa22.05■■□□□ 1.12
TRAF3-203ENST00000392745 PALD1Q9ULE6 856 aa22.05■■□□□ 1.12
TRAF3-203ENST00000392745 TTC41PQ6P2S7 1318 aa22.04■■□□□ 1.12
TRAF3-203ENST00000392745 TCIRG1Q13488 830 aa22.04■■□□□ 1.12
TRAF3-203ENST00000392745 LMBR1LQ6UX01 489 aa22.04■■□□□ 1.12
TRAF3-203ENST00000392745 AACSQ86V21 672 aa22.04■■□□□ 1.12
TRAF3-203ENST00000392745 ESYT1Q9BSJ8 1104 aa22.04■■□□□ 1.12
TRAF3-203ENST00000392745 ISCA1Q9BUE6 129 aa22.04■■□□□ 1.12
TRAF3-203ENST00000392745 IFIT2P09913 472 aaKnown RBP22.04■■□□□ 1.12
TRAF3-203ENST00000392745 FOXD4L6Q3SYB3 417 aaPredicted RBP22.04■■□□□ 1.12
TRAF3-203ENST00000392745 FOXD4L3Q6VB84 417 aaPredicted RBP22.04■■□□□ 1.12
TRAF3-203ENST00000392745 C8orf37Q96NL8 207 aa22.04■■□□□ 1.12
TRAF3-203ENST00000392745 A0A0G2JS52 829 aa22.02■■□□□ 1.12
TRAF3-203ENST00000392745 CUL4AQ13619 759 aa22.02■■□□□ 1.12
TRAF3-203ENST00000392745 NGLY1Q96IV0 654 aa22.02■■□□□ 1.12
TRAF3-203ENST00000392745 CCDC8Q9H0W5 538 aaPredicted RBP22.02■■□□□ 1.12
TRAF3-203ENST00000392745 TSPY26PQ9H489 355 aa22.02■■□□□ 1.12
TRAF3-203ENST00000392745 ECHDC1Q9NTX5 307 aa22.02■■□□□ 1.12
TRAF3-203ENST00000392745 ZBTB1Q9Y2K1 713 aa22.02■■□□□ 1.12
TRAF3-203ENST00000392745 MAP7D2Q96T17 732 aa22.02■■□□□ 1.12
TRAF3-203ENST00000392745 BCL9LQ86UU0 1499 aa22.02■■□□□ 1.11
TRAF3-203ENST00000392745 GLRX3O76003 335 aaKnown RBP22.01■■□□□ 1.11
TRAF3-203ENST00000392745 ARID3AQ99856 593 aa22.01■■□□□ 1.11
TRAF3-203ENST00000392745 IL25Q9H293 177 aa22.01■■□□□ 1.11
TRAF3-203ENST00000392745 GDPD2Q9HCC8 539 aa22.01■■□□□ 1.11
TRAF3-203ENST00000392745 JCADQ9P266 1359 aa22.01■■□□□ 1.11
TRAF3-203ENST00000392745 KIF6Q6ZMV9 814 aa22.01■■□□□ 1.11
TRAF3-203ENST00000392745 TLR7Q9NYK1 1049 aaKnown RBP22.01■■□□□ 1.11
TRAF3-203ENST00000392745 GADD45BO75293 160 aaPredicted RBP22■■□□□ 1.11
TRAF3-203ENST00000392745 HLFQ16534 295 aa22■■□□□ 1.11
TRAF3-203ENST00000392745 FAM98CQ17RN3 349 aaKnown RBP22■■□□□ 1.11
TRAF3-203ENST00000392745 DYNC1I1O14576 645 aa22■■□□□ 1.11
TRAF3-203ENST00000392745 PTMAP06454 111 aaKnown RBP22■■□□□ 1.11
TRAF3-203ENST00000392745 SASS6Q6UVJ0 657 aa22■■□□□ 1.11
TRAF3-203ENST00000392745 MAP3K15Q6ZN16 1313 aa21.99■■□□□ 1.11
TRAF3-203ENST00000392745 MCM2P49736 904 aa21.99■■□□□ 1.11
TRAF3-203ENST00000392745 TRIM28Q13263 835 aaKnown RBP21.99■■□□□ 1.11
TRAF3-203ENST00000392745 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.99■■□□□ 1.11
TRAF3-203ENST00000392745 CNTROBQ8N137 903 aa21.99■■□□□ 1.11
TRAF3-203ENST00000392745 MPNDQ8N594 471 aa21.99■■□□□ 1.11
TRAF3-203ENST00000392745 CHMP3Q9Y3E7 222 aa21.99■■□□□ 1.11
TRAF3-203ENST00000392745 GIGYF2Q6Y7W6 1299 aaKnown RBP21.98■■□□□ 1.11
TRAF3-203ENST00000392745 ANO2Q9NQ90 1003 aa21.98■■□□□ 1.11
TRAF3-203ENST00000392745 TFCP2Q12800 502 aa21.98■■□□□ 1.11
TRAF3-203ENST00000392745 KCNQ2O43526 872 aa21.97■■□□□ 1.11
TRAF3-203ENST00000392745 VPS72Q15906 364 aa21.97■■□□□ 1.11
TRAF3-203ENST00000392745 UPF3BQ9BZI7 483 aaKnown RBP21.97■■□□□ 1.11
TRAF3-203ENST00000392745 GPATCH3Q96I76 525 aa21.97■■□□□ 1.11
TRAF3-203ENST00000392745 INTS4Q96HW7 963 aaKnown RBP21.96■■□□□ 1.11
TRAF3-203ENST00000392745 MCCP23508 829 aa21.96■■□□□ 1.11
TRAF3-203ENST00000392745 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
TRAF3-203ENST00000392745 KIAA2012Q0VF49 1180 aa21.95■■□□□ 1.1
TRAF3-203ENST00000392745 FNBP4Q8N3X1 1017 aaPredicted RBP21.95■■□□□ 1.1
TRAF3-203ENST00000392745 SYAP1Q96A49 352 aaPredicted RBP21.95■■□□□ 1.1
TRAF3-203ENST00000392745 ATP6V1AP38606 617 aa21.95■■□□□ 1.1
TRAF3-203ENST00000392745 IL6STP40189 918 aaPredicted RBP21.95■■□□□ 1.1
TRAF3-203ENST00000392745 USP48Q86UV5 1035 aa21.95■■□□□ 1.1
TRAF3-203ENST00000392745 TBC1D2BQ9UPU7 963 aa21.95■■□□□ 1.1
TRAF3-203ENST00000392745 NUP98P52948 1817 aa21.94■■□□□ 1.1
TRAF3-203ENST00000392745 LOC102724428A0A0B4J2F2 783 aa21.94■■□□□ 1.1
TRAF3-203ENST00000392745 GPTP24298 496 aa21.94■■□□□ 1.1
TRAF3-203ENST00000392745 SIK1P57059 783 aa21.94■■□□□ 1.1
TRAF3-203ENST00000392745 TNNI3KQ59H18 835 aa21.94■■□□□ 1.1
TRAF3-203ENST00000392745 INTS5Q6P9B9 1019 aaKnown RBP21.94■■□□□ 1.1
TRAF3-203ENST00000392745 ATG9AQ7Z3C6 839 aa21.94■■□□□ 1.1
TRAF3-203ENST00000392745 SYNE4Q8N205 404 aa21.94■■□□□ 1.1
TRAF3-203ENST00000392745 ZNF830Q96NB3 372 aaPredicted RBP21.94■■□□□ 1.1
TRAF3-203ENST00000392745 FPGT-TNNI3KV9GXZ4 949 aa21.94■■□□□ 1.1
TRAF3-203ENST00000392745 TCHHQ07283 1943 aa21.93■■□□□ 1.1
TRAF3-203ENST00000392745 PCCAP05165 728 aaPredicted RBP21.93■■□□□ 1.1
TRAF3-203ENST00000392745 ANAPC15P60006 121 aa21.93■■□□□ 1.1
TRAF3-203ENST00000392745 ZNF594Q96JF6 807 aaPredicted RBP21.93■■□□□ 1.1
TRAF3-203ENST00000392745 ITPK1Q13572 414 aa21.92■■□□□ 1.1
TRAF3-203ENST00000392745 ZBTB38Q8NAP3 1195 aaPredicted RBP21.92■■□□□ 1.1
TRAF3-203ENST00000392745 BOLA2Q9H3K6 86 aa21.92■■□□□ 1.1
TRAF3-203ENST00000392745 DBNLQ9UJU6 430 aaKnown RBP21.92■■□□□ 1.1
TRAF3-203ENST00000392745 SGSM2O43147 1006 aa21.92■■□□□ 1.1
TRAF3-203ENST00000392745 NLRP10Q86W26 655 aa21.92■■□□□ 1.1
TRAF3-203ENST00000392745 DZIP3Q86Y13 1208 aaKnown RBP21.92■■□□□ 1.1
TRAF3-203ENST00000392745 PRDM4Q9UKN5 801 aa21.92■■□□□ 1.1
TRAF3-203ENST00000392745 MYH14Q7Z406 1995 aaKnown RBP21.92■■□□□ 1.1
TRAF3-203ENST00000392745 EIF5P55010 431 aaKnown RBP21.91■■□□□ 1.1
TRAF3-203ENST00000392745 TPRNQ4KMQ1 711 aa21.91■■□□□ 1.1
TRAF3-203ENST00000392745 CWC27Q6UX04 472 aaKnown RBP21.91■■□□□ 1.1
TRAF3-203ENST00000392745 CRKLP46109 303 aaKnown RBP21.91■■□□□ 1.1
TRAF3-203ENST00000392745 EVI5LQ96CN4 794 aa21.91■■□□□ 1.1
TRAF3-203ENST00000392745 USP25Q9UHP3 1055 aa21.91■■□□□ 1.1
TRAF3-203ENST00000392745 LRRC24Q50LG9 513 aa21.9■■□□□ 1.1
TRAF3-203ENST00000392745 DNTTIP2Q5QJE6 756 aaKnown RBP21.9■■□□□ 1.1
TRAF3-203ENST00000392745 USP21Q9UK80 565 aa21.9■■□□□ 1.1
TRAF3-203ENST00000392745 PALLDQ8WX93 1383 aa21.9■■□□□ 1.1
TRAF3-203ENST00000392745 CERKQ8TCT0 537 aa21.9■■□□□ 1.1
TRAF3-203ENST00000392745 CCDC87Q9NVE4 849 aa21.9■■□□□ 1.1
TRAF3-203ENST00000392745 ANKRD36CQ5JPF3 1778 aa21.9■■□□□ 1.1
TRAF3-203ENST00000392745 ERVV-1B6SEH8 477 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms