RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 TTLL11Q8NHH1 800 aa13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 EVI5LQ96CN4 794 aa13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 DBNLQ9UJU6 430 aaKnown RBP13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 ZNF652Q9Y2D9 606 aa13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 DDX60Q8IY21 1712 aaKnown RBP13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 EPB41L2O43491 1005 aaKnown RBP13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 PDE8AO60658 829 aa13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 IFIT5Q13325 482 aaKnown RBP13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 ZNF594Q96JF6 807 aaPredicted RBP13.94□□□□□ -0.18
SMARCAL1-203ENST00000392128 SUSD4Q5VX71 490 aa13.93□□□□□ -0.18
SMARCAL1-203ENST00000392128 SNX21Q969T3 373 aa13.93□□□□□ -0.18
SMARCAL1-203ENST00000392128 ZNF609O15014 1411 aa13.93□□□□□ -0.18
SMARCAL1-203ENST00000392128 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
SMARCAL1-203ENST00000392128 ATP5JP18859 108 aa13.93□□□□□ -0.18
SMARCAL1-203ENST00000392128 LRRC24Q50LG9 513 aa13.93□□□□□ -0.18
SMARCAL1-203ENST00000392128 UTP14AQ9BVJ6 771 aaKnown RBP13.93□□□□□ -0.18
SMARCAL1-203ENST00000392128 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
SMARCAL1-203ENST00000392128 CCNL1Q9UK58 526 aaPredicted RBP13.93□□□□□ -0.18
SMARCAL1-203ENST00000392128 KCNQ4P56696 695 aa13.92□□□□□ -0.18
SMARCAL1-203ENST00000392128 LRP5O75197 1615 aa13.92□□□□□ -0.18
SMARCAL1-203ENST00000392128 RPS6KA4O75676 772 aa13.92□□□□□ -0.18
SMARCAL1-203ENST00000392128 C4BP0C0L5 1744 aa13.92□□□□□ -0.18
SMARCAL1-203ENST00000392128 ITGA6P23229 1130 aa13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 DBNDD2Q9BQY9 259 aa13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 PUS3Q9BZE2 481 aaKnown RBP13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 GREM2Q9H772 168 aa13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 NIP7Q9Y221 180 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 ANKRD18BA2A2Z9 1011 aa13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 SGSM2O43147 1006 aa13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 NTSR2O95665 410 aa13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 HSP90B1P14625 803 aaKnown RBP13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 TAF7LQ5H9L4 462 aa13.91□□□□□ -0.18
SMARCAL1-203ENST00000392128 HIP1O00291 1037 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 RABEP1Q15276 862 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 HSCBQ8IWL3 235 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 CCDC85AQ96PX6 553 aaPredicted RBP13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 BOLA2Q9H3K6 86 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 FAM196AQ6ZSG2 479 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 RUFY2Q8WXA3 655 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 IL25Q9H293 177 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 ANO2Q9NQ90 1003 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
SMARCAL1-203ENST00000392128 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 KRT27Q7Z3Y8 459 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 AKAP2Q9Y2D5 859 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 C4AP0C0L4 1744 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 SPEF2Q9C093 1822 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 MCCP23508 829 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 RIPOR2Q9Y4F9 1068 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 RTL9Q8NET4 1388 aa13.89□□□□□ -0.19
SMARCAL1-203ENST00000392128 CASZ1Q86V15 1759 aa13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 A0A1B0GUL7 405 aa13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 GNPATO15228 680 aa13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 ZNF772Q68DY9 489 aaPredicted RBP13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 IL17RAQ96F46 866 aa13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 HAUS7Q99871 368 aa13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 RTCBQ9Y3I0 505 aaKnown RBP13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 ANAPC15P60006 121 aa13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 TIMM10P62072 90 aa13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 CWC27Q6UX04 472 aaKnown RBP13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 LDHAL6AQ6ZMR3 332 aa13.88□□□□□ -0.19
SMARCAL1-203ENST00000392128 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
SMARCAL1-203ENST00000392128 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCAL1-203ENST00000392128 BCL2L12Q9HB09 334 aa13.87□□□□□ -0.19
SMARCAL1-203ENST00000392128 RAD50Q92878 1312 aa13.87□□□□□ -0.19
SMARCAL1-203ENST00000392128 FAM177BA6PVY3 158 aa13.86□□□□□ -0.19
SMARCAL1-203ENST00000392128 RBM6P78332 1123 aaKnown RBP13.86□□□□□ -0.19
SMARCAL1-203ENST00000392128 FSD1Q9BTV5 496 aa13.86□□□□□ -0.19
SMARCAL1-203ENST00000392128 SNRKQ9NRH2 765 aa13.86□□□□□ -0.19
SMARCAL1-203ENST00000392128 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
SMARCAL1-203ENST00000392128 LSG1Q9H089 658 aaKnown RBP13.86□□□□□ -0.19
SMARCAL1-203ENST00000392128 ARAP2Q8WZ64 1704 aa13.86□□□□□ -0.19
SMARCAL1-203ENST00000392128 ZPR1O75312 459 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 CCDC152Q4G0S7 254 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 METTL24Q5JXM2 366 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 USPL1Q5W0Q7 1092 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 UBR3Q6ZT12 1888 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 VGLL2Q8N8G2 317 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 CNNM1Q9NRU3 951 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 ABCC12Q96J65 1359 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 HSPA4P34932 840 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 TBC1D9BQ66K14 1250 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
SMARCAL1-203ENST00000392128 CD2BP2O95400 341 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 SLC27A3Q5K4L6 730 aa13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 XAGE2Q96GT9 111 aa13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 ANTXR1Q9H6X2 564 aa13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 LRRC4BQ9NT99 713 aa13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 MROH5Q6ZUA9 1318 aa13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 K7ELQ4 463 aaPredicted RBP13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 NMIQ13287 307 aaPredicted RBP13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 SRP68Q9UHB9 627 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-203ENST00000392128 ADRA2BP18089 450 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms