RNA–Protein interactions for RNA: ENST00000391096.1

RNU6-1248P-201, Transcript of RNA, U6 small nuclear 1248, pseudogene, humanhuman

BASIC

Gene RNU6-1248P, Length 64 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1248P-201ENST00000391096 TM4SF5O14894 197 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 ZBTB39O15060 712 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 CCINQ13939 588 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 TRIP4Q15650 581 aaPredicted RBP4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 C11orf91Q3C1V1 193 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 SHISA2Q6UWI4 295 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 FAM200AQ8TCP9 573 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 NUDT8Q8WV74 236 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 LPIN3Q9BQK8 851 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 C1orf115Q9H7X2 142 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 NEUROD4Q9HD90 331 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 TPSG1Q9NRR2 321 aa4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.3□□□□□ -1.72
RNU6-1248P-201ENST00000391096 ACIN1Q9UKV3 1341 aaKnown RBP4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 A0A0A0MRY4 1105 aa4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 PRMT3O60678 531 aa4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 SASH3O75995 380 aa4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 EGFRP00533 1210 aa4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 SPATA31C1P0DKV0 1188 aa4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 PERM1Q5SV97 790 aa4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 TMEM164Q5U3C3 297 aa4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 TRPM4Q8TD43 1214 aa4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1248P-201ENST00000391096 ATG7O95352 703 aa4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 MAP3K6O95382 1288 aa4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 ALAS2P22557 587 aa4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 MLLT1Q03111 559 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 COL13A1Q5TAT6 717 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 PSAPL1Q6NUJ1 521 aa4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 KRT25Q7Z3Z0 450 aa4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 TREML1Q86YW5 311 aa4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 SSBP4Q9BWG4 385 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 UBE2OQ9C0C9 1292 aaKnown RBP4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 ZMYND15Q9H091 742 aa4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 IGFLR1Q9H665 355 aa4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 NOP53Q9NZM5 478 aaKnown RBP4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 CXXC1Q9P0U4 656 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 CHMP3Q9Y3E7 222 aa4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 RTCBQ9Y3I0 505 aaKnown RBP4.28□□□□□ -1.72
RNU6-1248P-201ENST00000391096 ARID3CA6NKF2 412 aa4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 MMP20O60882 483 aa4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 DEAF1O75398 565 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 ARSDP51689 593 aa4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 TBC1D8BQ0IIM8 1120 aa4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 ADGRE1Q14246 886 aa4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 SWI5Q1ZZU3 235 aa4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 HFE2Q6ZVN8 426 aa4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 DHX32Q7L7V1 743 aaKnown RBP4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 RBM19Q9Y4C8 960 aaKnown RBP4.27□□□□□ -1.73
RNU6-1248P-201ENST00000391096 J3QW42 95 aa4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 LILRB5O75023 590 aa4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 CPB1P15086 417 aa4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 GATA4P43694 442 aa4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 MBTPS1Q14703 1052 aa4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 NAA30Q147X3 362 aaPredicted RBP4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 DMRTC2Q8IXT2 367 aaPredicted RBP4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 RGL4Q8IZJ4 473 aa4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 FMR1NBQ8N0W7 255 aaPredicted RBP4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 MKNK1Q9BUB5 465 aa4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 JPH1Q9HDC5 661 aaPredicted RBP4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 SEPT3Q9UH03 358 aa4.26□□□□□ -1.73
RNU6-1248P-201ENST00000391096 CARNS1A5YM72 827 aa4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 TMEM88BA6NKF7 163 aa4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 HOXD8P13378 290 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 GPLD1P80108 840 aa4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 MSL1Q68DK7 614 aa4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 CLP1Q92989 425 aaKnown RBP4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 SEMA6BQ9H3T3 888 aa4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 EFCC1Q9HA90 598 aa4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 C11orf16Q9NQ32 467 aa4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 TLR7Q9NYK1 1049 aaKnown RBP4.25□□□□□ -1.73
RNU6-1248P-201ENST00000391096 DYRK3O43781 588 aa4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 RARAP10276 462 aa4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 NRG1Q02297 640 aaPredicted RBP4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 TRIM28Q13263 835 aaKnown RBP4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 HIF1AQ16665 826 aa4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 TRAPPC3LQ5T215 181 aa4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 PHLDB3Q6NSJ2 640 aa4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 FAM35AQ86V20 835 aa4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 CMTR1Q8N1G2 835 aaKnown RBP4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 TTC9Q92623 222 aa4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 COL26A1Q96A83 441 aa4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 LENG1Q96BZ8 264 aaPredicted RBP4.24□□□□□ -1.73
RNU6-1248P-201ENST00000391096 PIK3R2O00459 728 aa4.23□□□□□ -1.73
RNU6-1248P-201ENST00000391096 XYLBO75191 536 aa4.23□□□□□ -1.73
RNU6-1248P-201ENST00000391096 CYP2E1P05181 493 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1248P-201ENST00000391096 ELNP15502 786 aa4.23□□□□□ -1.73
RNU6-1248P-201ENST00000391096 NRLP54845 237 aa4.23□□□□□ -1.73
RNU6-1248P-201ENST00000391096 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
RNU6-1248P-201ENST00000391096 C16orf46Q6P387 395 aa4.23□□□□□ -1.73
RNU6-1248P-201ENST00000391096 FRRS1LQ9P0K9 344 aa4.23□□□□□ -1.73
RNU6-1248P-201ENST00000391096 LOC102724428A0A0B4J2F2 783 aa4.22□□□□□ -1.73
RNU6-1248P-201ENST00000391096 DLL1O00548 723 aa4.22□□□□□ -1.73
RNU6-1248P-201ENST00000391096 RGS9O75916 674 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1248P-201ENST00000391096 NOS3P29474 1203 aa4.22□□□□□ -1.73
RNU6-1248P-201ENST00000391096 SIK1P57059 783 aa4.22□□□□□ -1.73
RNU6-1248P-201ENST00000391096 NEUROD1Q13562 356 aa4.22□□□□□ -1.73
RNU6-1248P-201ENST00000391096 PRRT3Q5FWE3 981 aa4.22□□□□□ -1.73
RNU6-1248P-201ENST00000391096 ATCAYQ86WG3 371 aa4.22□□□□□ -1.73
RNU6-1248P-201ENST00000391096 FBXO11Q86XK2 927 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms