RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 CC2D2BQ6DHV5 1058 aa19.01■□□□□ 0.63
IGHV3-53-201ENST00000390627 C7orf43Q8WVR3 580 aa19.01■□□□□ 0.63
IGHV3-53-201ENST00000390627 PLA2G12BQ9BX93 195 aa19.01■□□□□ 0.63
IGHV3-53-201ENST00000390627 TMX4Q9H1E5 349 aaPredicted RBP19.01■□□□□ 0.63
IGHV3-53-201ENST00000390627 BBOX1O75936 387 aa19■□□□□ 0.63
IGHV3-53-201ENST00000390627 CCT4P50991 539 aaKnown RBP19■□□□□ 0.63
IGHV3-53-201ENST00000390627 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
IGHV3-53-201ENST00000390627 YY1P25490 414 aa18.99■□□□□ 0.63
IGHV3-53-201ENST00000390627 GRIPAP1Q4V328 841 aa18.99■□□□□ 0.63
IGHV3-53-201ENST00000390627 TMC4Q7Z404 712 aa18.99■□□□□ 0.63
IGHV3-53-201ENST00000390627 RTKN2Q8IZC4 609 aa18.99■□□□□ 0.63
IGHV3-53-201ENST00000390627 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
IGHV3-53-201ENST00000390627 MYH3P11055 1940 aa18.99■□□□□ 0.63
IGHV3-53-201ENST00000390627 LTBP3Q9NS15 1303 aa18.99■□□□□ 0.63
IGHV3-53-201ENST00000390627 NFKBIEO00221 500 aa18.98■□□□□ 0.63
IGHV3-53-201ENST00000390627 RASSF7Q02833 373 aa18.98■□□□□ 0.63
IGHV3-53-201ENST00000390627 ATF7IPQ6VMQ6 1270 aa18.98■□□□□ 0.63
IGHV3-53-201ENST00000390627 TAOK3Q9H2K8 898 aa18.98■□□□□ 0.63
IGHV3-53-201ENST00000390627 FER1L6Q2WGJ9 1857 aa18.98■□□□□ 0.63
IGHV3-53-201ENST00000390627 RTL9Q8NET4 1388 aa18.97■□□□□ 0.63
IGHV3-53-201ENST00000390627 ZKSCAN2Q63HK3 967 aa18.97■□□□□ 0.63
IGHV3-53-201ENST00000390627 TTLL11Q8NHH1 800 aa18.97■□□□□ 0.63
IGHV3-53-201ENST00000390627 ATP6V0A2Q9Y487 856 aa18.97■□□□□ 0.63
IGHV3-53-201ENST00000390627 UTYO14607 1347 aa18.97■□□□□ 0.63
IGHV3-53-201ENST00000390627 TRIM27P14373 513 aa18.96■□□□□ 0.63
IGHV3-53-201ENST00000390627 CELF1Q92879 486 aaKnown RBP18.96■□□□□ 0.63
IGHV3-53-201ENST00000390627 CCDC85AQ96PX6 553 aaPredicted RBP18.96■□□□□ 0.63
IGHV3-53-201ENST00000390627 CDC5LQ99459 802 aaKnown RBP18.96■□□□□ 0.63
IGHV3-53-201ENST00000390627 LMNB1P20700 586 aa18.95■□□□□ 0.62
IGHV3-53-201ENST00000390627 RPS8P62241 208 aaKnown RBP18.95■□□□□ 0.62
IGHV3-53-201ENST00000390627 FKBP4Q02790 459 aaKnown RBP eCLIP18.95■□□□□ 0.62
IGHV3-53-201ENST00000390627 OLFM4Q6UX06 510 aa18.95■□□□□ 0.62
IGHV3-53-201ENST00000390627 SP8Q8IXZ3 490 aa18.95■□□□□ 0.62
IGHV3-53-201ENST00000390627 GREM2Q9H772 168 aa18.95■□□□□ 0.62
IGHV3-53-201ENST00000390627 SEC31BQ9NQW1 1179 aa18.95■□□□□ 0.62
IGHV3-53-201ENST00000390627 SNED1Q8TER0 1413 aa18.94■□□□□ 0.62
IGHV3-53-201ENST00000390627 CSF1RP07333 972 aa18.94■□□□□ 0.62
IGHV3-53-201ENST00000390627 NBPF7P0C2Y1 421 aaPredicted RBP18.94■□□□□ 0.62
IGHV3-53-201ENST00000390627 C9orf131Q5VYM1 1079 aa18.94■□□□□ 0.62
IGHV3-53-201ENST00000390627 ANKRD18AQ8IVF6 992 aa18.94■□□□□ 0.62
IGHV3-53-201ENST00000390627 RNF181Q9P0P0 153 aa18.94■□□□□ 0.62
IGHV3-53-201ENST00000390627 RCAN3Q9UKA8 241 aa18.94■□□□□ 0.62
IGHV3-53-201ENST00000390627 TAF1P21675 1872 aa18.93■□□□□ 0.62
IGHV3-53-201ENST00000390627 FOXO4P98177 505 aa18.93■□□□□ 0.62
IGHV3-53-201ENST00000390627 INTS3Q68E01 1043 aaKnown RBP18.93■□□□□ 0.62
IGHV3-53-201ENST00000390627 PSMD1Q99460 953 aa18.93■□□□□ 0.62
IGHV3-53-201ENST00000390627 USP44Q9H0E7 712 aa18.93■□□□□ 0.62
IGHV3-53-201ENST00000390627 SBF1O95248 1867 aa18.92■□□□□ 0.62
IGHV3-53-201ENST00000390627 LRRC37AA6NMS7 1700 aa18.92■□□□□ 0.62
IGHV3-53-201ENST00000390627 ITGA6P23229 1130 aa18.92■□□□□ 0.62
IGHV3-53-201ENST00000390627 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
IGHV3-53-201ENST00000390627 FTSJ3Q8IY81 847 aaKnown RBP18.92■□□□□ 0.62
IGHV3-53-201ENST00000390627 SUCLG2Q96I99 432 aa18.92■□□□□ 0.62
IGHV3-53-201ENST00000390627 CHMP3Q9Y3E7 222 aa18.92■□□□□ 0.62
IGHV3-53-201ENST00000390627 LMBR1LQ6UX01 489 aa18.91■□□□□ 0.62
IGHV3-53-201ENST00000390627 CLUAP1Q96AJ1 413 aa18.91■□□□□ 0.62
IGHV3-53-201ENST00000390627 HDAC5Q9UQL6 1122 aa18.91■□□□□ 0.62
IGHV3-53-201ENST00000390627 ZC3H4Q9UPT8 1303 aaKnown RBP18.91■□□□□ 0.62
IGHV3-53-201ENST00000390627 COL4A1P02462 1669 aa18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 ANKRD18BA2A2Z9 1011 aa18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 UBTFL1P0CB47 393 aaPredicted RBP18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 IGHMBP2P38935 993 aaKnown RBP18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 PRELPP51888 382 aa18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 IFIT5Q13325 482 aaKnown RBP18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 EPHA10Q5JZY3 1008 aa18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 DPP8Q6V1X1 898 aaPredicted RBP18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 MPNDQ8N594 471 aa18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 SUPT20HQ8NEM7 779 aa18.9■□□□□ 0.62
IGHV3-53-201ENST00000390627 CCDC57Q2TAC2 916 aa18.89■□□□□ 0.61
IGHV3-53-201ENST00000390627 SLC51AQ86UW1 340 aa18.89■□□□□ 0.61
IGHV3-53-201ENST00000390627 DZIP1LQ8IYY4 767 aaKnown RBP18.89■□□□□ 0.61
IGHV3-53-201ENST00000390627 KAZALD1Q96I82 304 aa18.89■□□□□ 0.61
IGHV3-53-201ENST00000390627 BICC1Q9H694 974 aaKnown RBP18.89■□□□□ 0.61
IGHV3-53-201ENST00000390627 ZNF277Q9NRM2 450 aaPredicted RBP18.89■□□□□ 0.61
IGHV3-53-201ENST00000390627 TNNQ9UQP3 1299 aa18.89■□□□□ 0.61
IGHV3-53-201ENST00000390627 MS4A1P11836 297 aa18.88■□□□□ 0.61
IGHV3-53-201ENST00000390627 IARSP41252 1262 aaKnown RBP18.88■□□□□ 0.61
IGHV3-53-201ENST00000390627 RABL6Q3YEC7 729 aaPredicted RBP18.88■□□□□ 0.61
IGHV3-53-201ENST00000390627 RTFDC1Q9BY42 306 aaPredicted RBP18.88■□□□□ 0.61
IGHV3-53-201ENST00000390627 BSDC1Q9NW68 430 aaPredicted RBP18.88■□□□□ 0.61
IGHV3-53-201ENST00000390627 CCDC88AQ3V6T2 1871 aa18.88■□□□□ 0.61
IGHV3-53-201ENST00000390627 GNAI3P08754 354 aa18.87■□□□□ 0.61
IGHV3-53-201ENST00000390627 TAF7LQ5H9L4 462 aa18.87■□□□□ 0.61
IGHV3-53-201ENST00000390627 TIAM2Q8IVF5 1701 aa18.87■□□□□ 0.61
IGHV3-53-201ENST00000390627 TMEM57Q8N5G2 664 aa18.87■□□□□ 0.61
IGHV3-53-201ENST00000390627 MPHOSPH8Q99549 860 aa18.87■□□□□ 0.61
IGHV3-53-201ENST00000390627 MEIS3Q99687 375 aa18.87■□□□□ 0.61
IGHV3-53-201ENST00000390627 VPS33BQ9H267 617 aa18.87■□□□□ 0.61
IGHV3-53-201ENST00000390627 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
IGHV3-53-201ENST00000390627 DICER1Q9UPY3 1922 aaKnown RBP18.87■□□□□ 0.61
IGHV3-53-201ENST00000390627 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
IGHV3-53-201ENST00000390627 GPSM2P81274 684 aa18.85■□□□□ 0.61
IGHV3-53-201ENST00000390627 ANKRD44Q8N8A2 993 aa18.85■□□□□ 0.61
IGHV3-53-201ENST00000390627 PODXL2Q9NZ53 605 aa18.85■□□□□ 0.61
IGHV3-53-201ENST00000390627 ANKIB1Q9P2G1 1089 aa18.85■□□□□ 0.61
IGHV3-53-201ENST00000390627 SPEF2Q9C093 1822 aa18.85■□□□□ 0.61
IGHV3-53-201ENST00000390627 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
IGHV3-53-201ENST00000390627 XDHP47989 1333 aa18.84■□□□□ 0.61
IGHV3-53-201ENST00000390627 PPIP5K2O43314 1243 aa18.84■□□□□ 0.61
IGHV3-53-201ENST00000390627 ITPRIPQ8IWB1 547 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms