RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 CIAPIN1Q6FI81 312 aa11.72□□□□□ -0.53
TRAV20-201ENST00000390448 LRP10Q7Z4F1 713 aa11.72□□□□□ -0.53
TRAV20-201ENST00000390448 SLC51AQ86UW1 340 aa11.72□□□□□ -0.53
TRAV20-201ENST00000390448 GRAPLQ8TC17 118 aaPredicted RBP11.72□□□□□ -0.53
TRAV20-201ENST00000390448 RUNDC1Q96C34 613 aa11.72□□□□□ -0.53
TRAV20-201ENST00000390448 CHPF2Q9P2E5 772 aa11.72□□□□□ -0.53
TRAV20-201ENST00000390448 SNED1Q8TER0 1413 aa11.71□□□□□ -0.53
TRAV20-201ENST00000390448 MYBBP1AQ9BQG0 1328 aaKnown RBP11.71□□□□□ -0.53
TRAV20-201ENST00000390448 CHL1O00533 1208 aa11.71□□□□□ -0.53
TRAV20-201ENST00000390448 FMR1Q06787 632 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRAV20-201ENST00000390448 KRT24Q2M2I5 525 aa11.71□□□□□ -0.53
TRAV20-201ENST00000390448 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.53
TRAV20-201ENST00000390448 TMC4Q7Z404 712 aa11.71□□□□□ -0.53
TRAV20-201ENST00000390448 CAPNS2Q96L46 248 aa11.71□□□□□ -0.53
TRAV20-201ENST00000390448 GPR101Q96P66 508 aaPredicted RBP11.71□□□□□ -0.53
TRAV20-201ENST00000390448 RTFDC1Q9BY42 306 aaPredicted RBP11.71□□□□□ -0.53
TRAV20-201ENST00000390448 DBF4Q9UBU7 674 aaPredicted RBP11.71□□□□□ -0.53
TRAV20-201ENST00000390448 H7C1D1 291 aa11.7□□□□□ -0.54
TRAV20-201ENST00000390448 KIAA2012Q0VF49 1180 aa11.7□□□□□ -0.54
TRAV20-201ENST00000390448 RTL5Q5HYW3 569 aaPredicted RBP11.7□□□□□ -0.54
TRAV20-201ENST00000390448 CYP4F22Q6NT55 531 aa11.7□□□□□ -0.54
TRAV20-201ENST00000390448 PLBD2Q8NHP8 589 aa11.7□□□□□ -0.54
TRAV20-201ENST00000390448 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
TRAV20-201ENST00000390448 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
TRAV20-201ENST00000390448 COL4A5P29400 1685 aa11.69□□□□□ -0.54
TRAV20-201ENST00000390448 ATP5J2-PTCD1G3V325 749 aa11.69□□□□□ -0.54
TRAV20-201ENST00000390448 G3V3G9 751 aa11.69□□□□□ -0.54
TRAV20-201ENST00000390448 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
TRAV20-201ENST00000390448 CELF2O95319 508 aaKnown RBP11.69□□□□□ -0.54
TRAV20-201ENST00000390448 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
TRAV20-201ENST00000390448 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
TRAV20-201ENST00000390448 CST9Q5W186 159 aa11.69□□□□□ -0.54
TRAV20-201ENST00000390448 FAM89AQ96GI7 184 aa11.69□□□□□ -0.54
TRAV20-201ENST00000390448 HYPKQ9NX55 129 aa11.69□□□□□ -0.54
TRAV20-201ENST00000390448 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
TRAV20-201ENST00000390448 HOXB7P09629 217 aa11.68□□□□□ -0.54
TRAV20-201ENST00000390448 HSPA8P11142 646 aaKnown RBP11.68□□□□□ -0.54
TRAV20-201ENST00000390448 HSP90B1P14625 803 aaKnown RBP11.68□□□□□ -0.54
TRAV20-201ENST00000390448 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
TRAV20-201ENST00000390448 ZC3H15Q8WU90 426 aaKnown RBP11.68□□□□□ -0.54
TRAV20-201ENST00000390448 GLIS2Q9BZE0 524 aaPredicted RBP11.68□□□□□ -0.54
TRAV20-201ENST00000390448 CNOT7Q9UIV1 285 aaKnown RBP11.68□□□□□ -0.54
TRAV20-201ENST00000390448 ADAMTS8Q9UP79 889 aa11.68□□□□□ -0.54
TRAV20-201ENST00000390448 TLL2Q9Y6L7 1015 aa11.68□□□□□ -0.54
TRAV20-201ENST00000390448 ADAMTSL1Q8N6G6 1762 aa11.67□□□□□ -0.54
TRAV20-201ENST00000390448 CDHR2Q9BYE9 1310 aa11.67□□□□□ -0.54
TRAV20-201ENST00000390448 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
TRAV20-201ENST00000390448 DUSP27Q5VZP5 1158 aa11.67□□□□□ -0.54
TRAV20-201ENST00000390448 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
TRAV20-201ENST00000390448 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
TRAV20-201ENST00000390448 EYA3Q99504 573 aa11.67□□□□□ -0.54
TRAV20-201ENST00000390448 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
TRAV20-201ENST00000390448 IRS4O14654 1257 aaPredicted RBP11.66□□□□□ -0.54
TRAV20-201ENST00000390448 MAP2K2P36507 400 aa11.66□□□□□ -0.54
TRAV20-201ENST00000390448 CALD1Q05682 793 aaKnown RBP11.66□□□□□ -0.54
TRAV20-201ENST00000390448 RBM26Q5T8P6 1007 aaKnown RBP11.66□□□□□ -0.54
TRAV20-201ENST00000390448 SAPCD2Q86UD0 394 aa11.66□□□□□ -0.54
TRAV20-201ENST00000390448 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
TRAV20-201ENST00000390448 DBNDD1Q9H9R9 158 aa11.66□□□□□ -0.54
TRAV20-201ENST00000390448 ELL2O00472 640 aaPredicted RBP11.65□□□□□ -0.54
TRAV20-201ENST00000390448 AOC2O75106 756 aa11.65□□□□□ -0.54
TRAV20-201ENST00000390448 RPS8P62241 208 aaKnown RBP11.65□□□□□ -0.54
TRAV20-201ENST00000390448 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
TRAV20-201ENST00000390448 DOK7Q18PE1 504 aa11.65□□□□□ -0.54
TRAV20-201ENST00000390448 USP48Q86UV5 1035 aa11.65□□□□□ -0.54
TRAV20-201ENST00000390448 TRPM4Q8TD43 1214 aa11.65□□□□□ -0.54
TRAV20-201ENST00000390448 CELF1Q92879 486 aaKnown RBP11.65□□□□□ -0.54
TRAV20-201ENST00000390448 ISCA1Q9BUE6 129 aa11.65□□□□□ -0.54
TRAV20-201ENST00000390448 CHMP4AQ9BY43 222 aa11.65□□□□□ -0.54
TRAV20-201ENST00000390448 ZC3H12CQ9C0D7 883 aaKnown RBP11.65□□□□□ -0.54
TRAV20-201ENST00000390448 ANKIB1Q9P2G1 1089 aa11.65□□□□□ -0.54
TRAV20-201ENST00000390448 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
TRAV20-201ENST00000390448 LTBP1Q14766 1721 aa11.65□□□□□ -0.54
TRAV20-201ENST00000390448 YDJCA8MPS7 323 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 PSMD14O00487 310 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 HIRAP54198 1017 aaPredicted RBP11.64□□□□□ -0.55
TRAV20-201ENST00000390448 GNAI1P63096 354 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 GPSM2P81274 684 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 TBC1D10BQ4KMP7 808 aaPredicted RBP11.64□□□□□ -0.55
TRAV20-201ENST00000390448 SAMD7Q7Z3H4 446 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 DPF2Q92785 391 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 DCPSQ96C86 337 aaKnown RBP11.64□□□□□ -0.55
TRAV20-201ENST00000390448 ABHD8Q96I13 439 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 MBIPQ9NS73 344 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 PGAP2Q9UHJ9 254 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 TSKSQ9UJT2 592 aa11.64□□□□□ -0.55
TRAV20-201ENST00000390448 CCDC85CA6NKD9 419 aa11.63□□□□□ -0.55
TRAV20-201ENST00000390448 CA12O43570 354 aa11.63□□□□□ -0.55
TRAV20-201ENST00000390448 ECE2O60344 883 aa11.63□□□□□ -0.55
TRAV20-201ENST00000390448 DDX58O95786 925 aaKnown RBP11.63□□□□□ -0.55
TRAV20-201ENST00000390448 RPS12P25398 132 aaKnown RBP11.63□□□□□ -0.55
TRAV20-201ENST00000390448 HUNKP57058 714 aa11.63□□□□□ -0.55
TRAV20-201ENST00000390448 TRIM28Q13263 835 aaKnown RBP11.63□□□□□ -0.55
TRAV20-201ENST00000390448 KRT26Q7Z3Y9 468 aa11.63□□□□□ -0.55
TRAV20-201ENST00000390448 ZBTB38Q8NAP3 1195 aaPredicted RBP11.63□□□□□ -0.55
TRAV20-201ENST00000390448 HHIPL1Q96JK4 782 aa11.63□□□□□ -0.55
TRAV20-201ENST00000390448 MYD88Q99836 296 aa11.63□□□□□ -0.55
TRAV20-201ENST00000390448 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
TRAV20-201ENST00000390448 SHTN1A0MZ66 631 aa11.62□□□□□ -0.55
TRAV20-201ENST00000390448 APAF1O14727 1248 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms