RNA–Protein interactions for RNA: ENST00000390360.3

TRBV6-4-201, Transcript of T cell receptor beta variable 6-4, humanhuman

APPRIS P1 BASIC

Gene TRBV6-4, Length 365 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4-201ENST00000390360 CTSWP56202 376 aa12.54□□□□□ -0.4
TRBV6-4-201ENST00000390360 TMC4Q7Z404 712 aa12.54□□□□□ -0.4
TRBV6-4-201ENST00000390360 PLA2G12BQ9BX93 195 aa12.54□□□□□ -0.4
TRBV6-4-201ENST00000390360 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
TRBV6-4-201ENST00000390360 SLX4Q8IY92 1834 aa12.53□□□□□ -0.4
TRBV6-4-201ENST00000390360 BCAR3O75815 825 aa12.53□□□□□ -0.4
TRBV6-4-201ENST00000390360 LMNB1P20700 586 aa12.53□□□□□ -0.4
TRBV6-4-201ENST00000390360 FRAT1Q92837 279 aaPredicted RBP12.53□□□□□ -0.4
TRBV6-4-201ENST00000390360 ATP6V0A2Q9Y487 856 aa12.53□□□□□ -0.4
TRBV6-4-201ENST00000390360 LTBP3Q9NS15 1303 aa12.53□□□□□ -0.4
TRBV6-4-201ENST00000390360 DDX60Q8IY21 1712 aaKnown RBP12.52□□□□□ -0.41
TRBV6-4-201ENST00000390360 NFKBIEO00221 500 aa12.52□□□□□ -0.41
TRBV6-4-201ENST00000390360 CASP7P55210 303 aa12.52□□□□□ -0.41
TRBV6-4-201ENST00000390360 RASSF7Q02833 373 aa12.52□□□□□ -0.41
TRBV6-4-201ENST00000390360 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.41
TRBV6-4-201ENST00000390360 SP8Q8IXZ3 490 aa12.52□□□□□ -0.41
TRBV6-4-201ENST00000390360 TTLL11Q8NHH1 800 aa12.52□□□□□ -0.41
TRBV6-4-201ENST00000390360 CHD4Q14839 1912 aa12.52□□□□□ -0.41
TRBV6-4-201ENST00000390360 RPS8P62241 208 aaKnown RBP12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 FKBP4Q02790 459 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 ZKSCAN2Q63HK3 967 aa12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 ATF7IPQ6VMQ6 1270 aa12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 CELF1Q92879 486 aaKnown RBP12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 CDC5LQ99459 802 aaKnown RBP12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 RNF181Q9P0P0 153 aa12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 LAMB2P55268 1798 aa12.51□□□□□ -0.41
TRBV6-4-201ENST00000390360 OLFM4Q6UX06 510 aa12.5□□□□□ -0.41
TRBV6-4-201ENST00000390360 ANKRD18AQ8IVF6 992 aa12.5□□□□□ -0.41
TRBV6-4-201ENST00000390360 PSMD1Q99460 953 aa12.5□□□□□ -0.41
TRBV6-4-201ENST00000390360 SEC31BQ9NQW1 1179 aa12.5□□□□□ -0.41
TRBV6-4-201ENST00000390360 UTYO14607 1347 aa12.5□□□□□ -0.41
TRBV6-4-201ENST00000390360 RTL9Q8NET4 1388 aa12.5□□□□□ -0.41
TRBV6-4-201ENST00000390360 CACNA1SQ13698 1873 aa12.49□□□□□ -0.41
TRBV6-4-201ENST00000390360 CSF1RP07333 972 aa12.49□□□□□ -0.41
TRBV6-4-201ENST00000390360 NBPF7P0C2Y1 421 aaPredicted RBP12.49□□□□□ -0.41
TRBV6-4-201ENST00000390360 TRIM27P14373 513 aa12.49□□□□□ -0.41
TRBV6-4-201ENST00000390360 GREM2Q9H772 168 aa12.49□□□□□ -0.41
TRBV6-4-201ENST00000390360 HDAC5Q9UQL6 1122 aa12.49□□□□□ -0.41
TRBV6-4-201ENST00000390360 ZC3H4Q9UPT8 1303 aaKnown RBP12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 ITGA6P23229 1130 aa12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 IGHMBP2P38935 993 aaKnown RBP12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 FOXO4P98177 505 aa12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 IFIT5Q13325 482 aaKnown RBP12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 DPP8Q6V1X1 898 aaPredicted RBP12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 MPNDQ8N594 471 aa12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 SUPT20HQ8NEM7 779 aa12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 USP44Q9H0E7 712 aa12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 RCAN3Q9UKA8 241 aa12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
TRBV6-4-201ENST00000390360 FER1L6Q2WGJ9 1857 aa12.47□□□□□ -0.41
TRBV6-4-201ENST00000390360 ANKRD18BA2A2Z9 1011 aa12.47□□□□□ -0.41
TRBV6-4-201ENST00000390360 UBTFL1P0CB47 393 aaPredicted RBP12.47□□□□□ -0.41
TRBV6-4-201ENST00000390360 CCDC57Q2TAC2 916 aa12.47□□□□□ -0.41
TRBV6-4-201ENST00000390360 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
TRBV6-4-201ENST00000390360 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
TRBV6-4-201ENST00000390360 FTSJ3Q8IY81 847 aaKnown RBP12.47□□□□□ -0.41
TRBV6-4-201ENST00000390360 SUCLG2Q96I99 432 aa12.47□□□□□ -0.41
TRBV6-4-201ENST00000390360 VPS33BQ9H267 617 aa12.47□□□□□ -0.41
TRBV6-4-201ENST00000390360 SNED1Q8TER0 1413 aa12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 PRELPP51888 382 aa12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 CLUAP1Q96AJ1 413 aa12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 MPHOSPH8Q99549 860 aa12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 RTFDC1Q9BY42 306 aaPredicted RBP12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 BSDC1Q9NW68 430 aaPredicted RBP12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 ANKIB1Q9P2G1 1089 aa12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 NSFL1CQ9UNZ2 370 aaKnown RBP12.46□□□□□ -0.41
TRBV6-4-201ENST00000390360 GNAI3P08754 354 aa12.45□□□□□ -0.42
TRBV6-4-201ENST00000390360 MS4A1P11836 297 aa12.45□□□□□ -0.42
TRBV6-4-201ENST00000390360 TAF7LQ5H9L4 462 aa12.45□□□□□ -0.42
TRBV6-4-201ENST00000390360 DZIP1LQ8IYY4 767 aaKnown RBP12.45□□□□□ -0.42
TRBV6-4-201ENST00000390360 LARGE2Q8N3Y3 721 aa12.45□□□□□ -0.42
TRBV6-4-201ENST00000390360 JDP2Q8WYK2 163 aa12.45□□□□□ -0.42
TRBV6-4-201ENST00000390360 KAZALD1Q96I82 304 aa12.45□□□□□ -0.42
TRBV6-4-201ENST00000390360 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
TRBV6-4-201ENST00000390360 MYH3P11055 1940 aa12.45□□□□□ -0.42
TRBV6-4-201ENST00000390360 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
TRBV6-4-201ENST00000390360 PPIP5K2O43314 1243 aa12.44□□□□□ -0.42
TRBV6-4-201ENST00000390360 GPSM2P81274 684 aa12.44□□□□□ -0.42
TRBV6-4-201ENST00000390360 RABL6Q3YEC7 729 aaPredicted RBP12.44□□□□□ -0.42
TRBV6-4-201ENST00000390360 DPY19L2Q6NUT2 758 aa12.44□□□□□ -0.42
TRBV6-4-201ENST00000390360 SLC51AQ86UW1 340 aa12.44□□□□□ -0.42
TRBV6-4-201ENST00000390360 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
TRBV6-4-201ENST00000390360 PODXL2Q9NZ53 605 aa12.44□□□□□ -0.42
TRBV6-4-201ENST00000390360 XDHP47989 1333 aa12.43□□□□□ -0.42
TRBV6-4-201ENST00000390360 SBF1O95248 1867 aa12.43□□□□□ -0.42
TRBV6-4-201ENST00000390360 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
TRBV6-4-201ENST00000390360 AOC3Q16853 763 aa12.43□□□□□ -0.42
TRBV6-4-201ENST00000390360 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
TRBV6-4-201ENST00000390360 TMEM57Q8N5G2 664 aa12.43□□□□□ -0.42
TRBV6-4-201ENST00000390360 ANKRD44Q8N8A2 993 aa12.43□□□□□ -0.42
TRBV6-4-201ENST00000390360 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
TRBV6-4-201ENST00000390360 ZNF526Q8TF50 670 aaPredicted RBP12.43□□□□□ -0.42
TRBV6-4-201ENST00000390360 EYA3Q99504 573 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms