RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 PHAXQ9H814 394 aaKnown RBP17.52■□□□□ 0.4
TRBV4-1-201ENST00000390357 MRS2Q9HD23 443 aa17.52■□□□□ 0.4
TRBV4-1-201ENST00000390357 ZNRF3Q9ULT6 936 aa17.52■□□□□ 0.4
TRBV4-1-201ENST00000390357 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
TRBV4-1-201ENST00000390357 CCDC184Q52MB2 194 aa17.51■□□□□ 0.39
TRBV4-1-201ENST00000390357 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
TRBV4-1-201ENST00000390357 CLEC11AQ9Y240 323 aa17.51■□□□□ 0.39
TRBV4-1-201ENST00000390357 HTRA3P83110 453 aa17.5■□□□□ 0.39
TRBV4-1-201ENST00000390357 KIAA2012Q0VF49 1180 aa17.5■□□□□ 0.39
TRBV4-1-201ENST00000390357 EAPPQ56P03 285 aaPredicted RBP17.5■□□□□ 0.39
TRBV4-1-201ENST00000390357 WDR63Q8IWG1 891 aa17.5■□□□□ 0.39
TRBV4-1-201ENST00000390357 METTL22Q9BUU2 404 aaPredicted RBP17.5■□□□□ 0.39
TRBV4-1-201ENST00000390357 GJA3Q9Y6H8 435 aa17.5■□□□□ 0.39
TRBV4-1-201ENST00000390357 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
TRBV4-1-201ENST00000390357 TNIP1Q15025 636 aa17.49■□□□□ 0.39
TRBV4-1-201ENST00000390357 AOC3Q16853 763 aa17.49■□□□□ 0.39
TRBV4-1-201ENST00000390357 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
TRBV4-1-201ENST00000390357 USP50Q70EL3 339 aaPredicted RBP17.49■□□□□ 0.39
TRBV4-1-201ENST00000390357 CACNA1FO60840 1977 aa17.49■□□□□ 0.39
TRBV4-1-201ENST00000390357 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
TRBV4-1-201ENST00000390357 PASKQ96RG2 1323 aa17.48■□□□□ 0.39
TRBV4-1-201ENST00000390357 ITGBL1O95965 494 aaPredicted RBP17.48■□□□□ 0.39
TRBV4-1-201ENST00000390357 POTEIP0CG38 1075 aa17.48■□□□□ 0.39
TRBV4-1-201ENST00000390357 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
TRBV4-1-201ENST00000390357 RPS8P62241 208 aaKnown RBP17.48■□□□□ 0.39
TRBV4-1-201ENST00000390357 NEXNQ0ZGT2 675 aa17.48■□□□□ 0.39
TRBV4-1-201ENST00000390357 MYD88Q99836 296 aa17.48■□□□□ 0.39
TRBV4-1-201ENST00000390357 CWC25Q9NXE8 425 aaPredicted RBP17.48■□□□□ 0.39
TRBV4-1-201ENST00000390357 PDE8AO60658 829 aa17.47■□□□□ 0.39
TRBV4-1-201ENST00000390357 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
TRBV4-1-201ENST00000390357 IFFO2Q5TF58 517 aa17.47■□□□□ 0.39
TRBV4-1-201ENST00000390357 CNTROBQ8N137 903 aa17.47■□□□□ 0.39
TRBV4-1-201ENST00000390357 TSPYL6Q8N831 410 aa17.47■□□□□ 0.39
TRBV4-1-201ENST00000390357 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
TRBV4-1-201ENST00000390357 TMEM88BA6NKF7 163 aa17.46■□□□□ 0.39
TRBV4-1-201ENST00000390357 CXCL9Q07325 125 aa17.46■□□□□ 0.39
TRBV4-1-201ENST00000390357 WASHC4Q2M389 1173 aa17.46■□□□□ 0.39
TRBV4-1-201ENST00000390357 CCDC152Q4G0S7 254 aa17.46■□□□□ 0.39
TRBV4-1-201ENST00000390357 CIAPIN1Q6FI81 312 aa17.46■□□□□ 0.39
TRBV4-1-201ENST00000390357 EYA3Q99504 573 aa17.46■□□□□ 0.39
TRBV4-1-201ENST00000390357 NSFL1CQ9UNZ2 370 aaKnown RBP17.46■□□□□ 0.39
TRBV4-1-201ENST00000390357 TAF1P21675 1872 aa17.46■□□□□ 0.38
TRBV4-1-201ENST00000390357 SCNN1DP51172 638 aa17.45■□□□□ 0.38
TRBV4-1-201ENST00000390357 CELF1Q92879 486 aaKnown RBP17.45■□□□□ 0.38
TRBV4-1-201ENST00000390357 ADARB2Q9NS39 739 aaKnown RBP17.45■□□□□ 0.38
TRBV4-1-201ENST00000390357 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
TRBV4-1-201ENST00000390357 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
TRBV4-1-201ENST00000390357 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
TRBV4-1-201ENST00000390357 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
TRBV4-1-201ENST00000390357 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
TRBV4-1-201ENST00000390357 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
TRBV4-1-201ENST00000390357 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
TRBV4-1-201ENST00000390357 GPRC5DQ9NZD1 345 aa17.44■□□□□ 0.38
TRBV4-1-201ENST00000390357 COL4A5P29400 1685 aa17.44■□□□□ 0.38
TRBV4-1-201ENST00000390357 EPS15P42566 896 aa17.43■□□□□ 0.38
TRBV4-1-201ENST00000390357 PODXL2Q9NZ53 605 aa17.43■□□□□ 0.38
TRBV4-1-201ENST00000390357 LRRC37AA6NMS7 1700 aa17.43■□□□□ 0.38
TRBV4-1-201ENST00000390357 C6orf229H3BNL8 230 aa17.42■□□□□ 0.38
TRBV4-1-201ENST00000390357 ZC3H15Q8WU90 426 aaKnown RBP17.42■□□□□ 0.38
TRBV4-1-201ENST00000390357 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
TRBV4-1-201ENST00000390357 ZC3H12CQ9C0D7 883 aaKnown RBP17.42■□□□□ 0.38
TRBV4-1-201ENST00000390357 MAP1SQ66K74 1059 aaPredicted RBP17.41■□□□□ 0.38
TRBV4-1-201ENST00000390357 DPF2Q92785 391 aa17.41■□□□□ 0.38
TRBV4-1-201ENST00000390357 H7C1D1 291 aa17.4■□□□□ 0.38
TRBV4-1-201ENST00000390357 VAMP4O75379 141 aa17.4■□□□□ 0.38
TRBV4-1-201ENST00000390357 GPSM2P81274 684 aa17.4■□□□□ 0.38
TRBV4-1-201ENST00000390357 ANKRD18AQ8IVF6 992 aa17.4■□□□□ 0.38
TRBV4-1-201ENST00000390357 ZNF428Q96B54 188 aa17.4■□□□□ 0.38
TRBV4-1-201ENST00000390357 CDC5LQ99459 802 aaKnown RBP17.4■□□□□ 0.38
TRBV4-1-201ENST00000390357 PGAP2Q9UHJ9 254 aa17.4■□□□□ 0.38
TRBV4-1-201ENST00000390357 H7C1W4 665 aa17.39■□□□□ 0.37
TRBV4-1-201ENST00000390357 IGKV5-2P06315 115 aa17.39■□□□□ 0.37
TRBV4-1-201ENST00000390357 GMPSP49915 693 aaPredicted RBP17.39■□□□□ 0.37
TRBV4-1-201ENST00000390357 DEFB115Q30KQ5 88 aa17.39■□□□□ 0.37
TRBV4-1-201ENST00000390357 TBC1D16Q8TBP0 767 aa17.39■□□□□ 0.37
TRBV4-1-201ENST00000390357 MYH16Q9H6N6 1097 aa17.39■□□□□ 0.37
TRBV4-1-201ENST00000390357 POLLQ9UGP5 575 aa17.39■□□□□ 0.37
TRBV4-1-201ENST00000390357 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
TRBV4-1-201ENST00000390357 NEURL1BA8MQ27 555 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 G3V3G9 751 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 RAD17O75943 681 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 RPS12P25398 132 aaKnown RBP17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 FLIIQ13045 1269 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 DCAF8Q5TAQ9 597 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 SLC51AQ86UW1 340 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 MKRN1Q9UHC7 482 aaKnown RBP17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 CNOT7Q9UIV1 285 aaKnown RBP17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 GGA1Q9UJY5 639 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
TRBV4-1-201ENST00000390357 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
TRBV4-1-201ENST00000390357 YDJCA8MPS7 323 aa17.37■□□□□ 0.37
TRBV4-1-201ENST00000390357 RIMBP2O15034 1052 aa17.37■□□□□ 0.37
TRBV4-1-201ENST00000390357 ATP2B4P23634 1241 aa17.37■□□□□ 0.37
TRBV4-1-201ENST00000390357 TTLL11Q8NHH1 800 aa17.37■□□□□ 0.37
TRBV4-1-201ENST00000390357 MYH3P11055 1940 aa17.37■□□□□ 0.37
TRBV4-1-201ENST00000390357 HSPA1AP0DMV8 641 aaKnown RBP17.36■□□□□ 0.37
TRBV4-1-201ENST00000390357 HSPA1BP0DMV9 641 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms