RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 TPCN1Q9ULQ1 816 aa13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 ATF3P18847 181 aa13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 TFCP2Q12800 502 aa13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 SLFNL1Q499Z3 407 aa13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 DNAJC2Q99543 621 aaKnown RBP13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 METTL22Q9BUU2 404 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 PATL2C9JE40 543 aaKnown RBP13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 SLC27A2O14975 620 aa13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 ZKSCAN1P17029 563 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 ZSWIM6Q9HCJ5 1215 aa13.95□□□□□ -0.18
RAPGEF3-201ENST00000389212 EPB41L2O43491 1005 aaKnown RBP13.94□□□□□ -0.18
RAPGEF3-201ENST00000389212 LETM1O95202 739 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF3-201ENST00000389212 SEC62Q99442 399 aaKnown RBP13.94□□□□□ -0.18
RAPGEF3-201ENST00000389212 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
RAPGEF3-201ENST00000389212 DBNLQ9UJU6 430 aaKnown RBP13.94□□□□□ -0.18
RAPGEF3-201ENST00000389212 VPS53Q5VIR6 699 aa13.93□□□□□ -0.18
RAPGEF3-201ENST00000389212 PDLIM2Q96JY6 352 aa13.93□□□□□ -0.18
RAPGEF3-201ENST00000389212 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
RAPGEF3-201ENST00000389212 MTMR6Q9Y217 621 aa13.93□□□□□ -0.18
RAPGEF3-201ENST00000389212 UTYO14607 1347 aa13.93□□□□□ -0.18
RAPGEF3-201ENST00000389212 A0A087WZG4 1122 aa13.93□□□□□ -0.18
RAPGEF3-201ENST00000389212 HDAC5Q9UQL6 1122 aa13.93□□□□□ -0.18
RAPGEF3-201ENST00000389212 MAP4K1Q92918 833 aa13.93□□□□□ -0.18
RAPGEF3-201ENST00000389212 DBNDD2Q9BQY9 259 aa13.93□□□□□ -0.18
RAPGEF3-201ENST00000389212 C5P01031 1676 aa13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 SNRPA1P09661 255 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 CABP4P57796 275 aa13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 GTPBP4Q9BZE4 634 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 HCLS1P14317 486 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 PTPN12Q05209 780 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 GIMAP6Q6P9H5 292 aa13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 TEX2Q8IWB9 1127 aa13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 PHRF1Q9P1Y6 1649 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-201ENST00000389212 PLCB2Q00722 1185 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 LRP10Q7Z4F1 713 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 LRRC2Q9BYS8 371 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 TMEM94Q12767 1356 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 DYNC1I1O14576 645 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 CDC37L1Q7L3B6 337 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 CNPY4Q8N129 248 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 PPFIA3O75145 1194 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 TNNI3KQ59H18 835 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 BLOC1S2Q6QNY1 142 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 USP25Q9UHP3 1055 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 ZNF330Q9Y3S2 320 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 FPGT-TNNI3KV9GXZ4 949 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 OVOS2A0A0G2JMS6 1433 aa13.91□□□□□ -0.18
RAPGEF3-201ENST00000389212 LARP1BQ659C4 914 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-201ENST00000389212 LMBR1LQ6UX01 489 aa13.9□□□□□ -0.18
RAPGEF3-201ENST00000389212 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.18
RAPGEF3-201ENST00000389212 CRYBG1Q9Y4K1 1723 aa13.9□□□□□ -0.18
RAPGEF3-201ENST00000389212 COL15A1P39059 1388 aa13.9□□□□□ -0.18
RAPGEF3-201ENST00000389212 RFX5P48382 616 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-201ENST00000389212 FOSBP53539 338 aa13.9□□□□□ -0.18
RAPGEF3-201ENST00000389212 TTLL7Q6ZT98 887 aa13.9□□□□□ -0.18
RAPGEF3-201ENST00000389212 ZNF142P52746 1687 aaPredicted RBP13.9□□□□□ -0.19
RAPGEF3-201ENST00000389212 NEUROD6Q96NK8 337 aa13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 SIPA1L3O60292 1781 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 CCDC183Q5T5S1 534 aa13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 TM6SF1Q9BZW5 370 aa13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 A1BGP04217 495 aa13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 UBE2HP62256 183 aa13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 KCNB2Q92953 911 aa13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 TFIP11Q9UBB9 837 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 NOL7Q9UMY1 257 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-201ENST00000389212 ZNF594Q96JF6 807 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 ZSCAN31Q96LW9 406 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 CCDC85AQ96PX6 553 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 SH2B1Q9NRF2 756 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 HIP1O00291 1037 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 TAF5LO75529 589 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 TOB2Q14106 344 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 NBPF14Q5TI25 921 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 NBPF10Q6P3W6 841 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 NBPF15Q8N660 670 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 TRIM34Q9BYJ4 488 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 ERICH4A6NGS2 130 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 JAK2O60674 1132 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 TIMM10P62072 90 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 TMEM87AQ8NBN3 555 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 COPRSQ9NQ92 184 aa13.88□□□□□ -0.19
RAPGEF3-201ENST00000389212 MED23Q9ULK4 1368 aa13.87□□□□□ -0.19
RAPGEF3-201ENST00000389212 PHF14O94880 888 aa13.87□□□□□ -0.19
RAPGEF3-201ENST00000389212 RPS6KB1P23443 525 aa13.87□□□□□ -0.19
RAPGEF3-201ENST00000389212 HSPA2P54652 639 aa13.87□□□□□ -0.19
RAPGEF3-201ENST00000389212 A0A0G2JLW4 131 aa13.87□□□□□ -0.19
RAPGEF3-201ENST00000389212 PSMA5P28066 241 aa13.87□□□□□ -0.19
RAPGEF3-201ENST00000389212 CAMK4Q16566 473 aa13.87□□□□□ -0.19
RAPGEF3-201ENST00000389212 DDX11Q96FC9 970 aa13.87□□□□□ -0.19
RAPGEF3-201ENST00000389212 ZKSCAN5Q9Y2L8 839 aa13.87□□□□□ -0.19
RAPGEF3-201ENST00000389212 RNF20Q5VTR2 975 aa13.86□□□□□ -0.19
RAPGEF3-201ENST00000389212 TTC6Q86TZ1 520 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms