RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 IGSF1Q8N6C5 1336 aa22.12■■□□□ 1.13
CSPG5-202ENST00000383738 DIP2CQ9Y2E4 1556 aa22.12■■□□□ 1.13
CSPG5-202ENST00000383738 CHST3Q7LGC8 479 aa22.12■■□□□ 1.13
CSPG5-202ENST00000383738 CCDC94Q9BW85 323 aaPredicted RBP22.12■■□□□ 1.13
CSPG5-202ENST00000383738 ALKQ9UM73 1620 aa22.12■■□□□ 1.13
CSPG5-202ENST00000383738 SPHKAPQ2M3C7 1700 aa22.11■■□□□ 1.13
CSPG5-202ENST00000383738 NECAB1Q8N987 351 aa22.11■■□□□ 1.13
CSPG5-202ENST00000383738 NUP62CLQ9H1M0 184 aa22.11■■□□□ 1.13
CSPG5-202ENST00000383738 CROCC2H7BZ55 1655 aa22.1■■□□□ 1.13
CSPG5-202ENST00000383738 PPRC1Q5VV67 1664 aaKnown RBP22.1■■□□□ 1.13
CSPG5-202ENST00000383738 CCDC73Q6ZRK6 1079 aa22.1■■□□□ 1.13
CSPG5-202ENST00000383738 TEX35Q5T0J7 233 aa22.1■■□□□ 1.13
CSPG5-202ENST00000383738 NAPBQ9H115 298 aa22.1■■□□□ 1.13
CSPG5-202ENST00000383738 FAM135BQ49AJ0 1406 aa22.1■■□□□ 1.13
CSPG5-202ENST00000383738 SAFBQ15424 915 aaKnown RBP eCLIP22.1■■□□□ 1.13
CSPG5-202ENST00000383738 CCDC183Q5T5S1 534 aa22.1■■□□□ 1.13
CSPG5-202ENST00000383738 KIDINS220Q9ULH0 1771 aa22.1■■□□□ 1.13
CSPG5-202ENST00000383738 ARHGEF10O15013 1369 aa22.09■■□□□ 1.13
CSPG5-202ENST00000383738 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
CSPG5-202ENST00000383738 SLC5A1P13866 664 aa22.09■■□□□ 1.13
CSPG5-202ENST00000383738 PDILTQ8N807 584 aa22.09■■□□□ 1.13
CSPG5-202ENST00000383738 EVI5LQ96CN4 794 aa22.09■■□□□ 1.13
CSPG5-202ENST00000383738 DBNDD2Q9BQY9 259 aa22.09■■□□□ 1.13
CSPG5-202ENST00000383738 CCNL1Q9UK58 526 aaPredicted RBP22.09■■□□□ 1.13
CSPG5-202ENST00000383738 NSFL1CQ9UNZ2 370 aaKnown RBP22.09■■□□□ 1.13
CSPG5-202ENST00000383738 TAF5LO75529 589 aa22.09■■□□□ 1.13
CSPG5-202ENST00000383738 RBM25P49756 843 aaKnown RBP22.08■■□□□ 1.13
CSPG5-202ENST00000383738 LMBRD1Q9NUN5 540 aa22.08■■□□□ 1.13
CSPG5-202ENST00000383738 RTCBQ9Y3I0 505 aaKnown RBP22.08■■□□□ 1.13
CSPG5-202ENST00000383738 RANBP6O60518 1105 aaKnown RBP22.08■■□□□ 1.13
CSPG5-202ENST00000383738 CCDC186Q7Z3E2 898 aa22.08■■□□□ 1.13
CSPG5-202ENST00000383738 TMX1Q9H3N1 280 aa22.08■■□□□ 1.13
CSPG5-202ENST00000383738 DZIP1Q86YF9 867 aaKnown RBP22.08■■□□□ 1.12
CSPG5-202ENST00000383738 NLRP3Q96P20 1036 aa22.08■■□□□ 1.12
CSPG5-202ENST00000383738 KRT85P78386 507 aa22.07■■□□□ 1.12
CSPG5-202ENST00000383738 METTL22Q9BUU2 404 aaPredicted RBP22.07■■□□□ 1.12
CSPG5-202ENST00000383738 IMMTQ16891 758 aaKnown RBP22.07■■□□□ 1.12
CSPG5-202ENST00000383738 TRMT2AQ8IZ69 625 aaKnown RBP22.07■■□□□ 1.12
CSPG5-202ENST00000383738 SOS1Q07889 1333 aaPredicted RBP22.07■■□□□ 1.12
CSPG5-202ENST00000383738 ABCA6Q8N139 1617 aa22.07■■□□□ 1.12
CSPG5-202ENST00000383738 LETM1O95202 739 aaPredicted RBP22.07■■□□□ 1.12
CSPG5-202ENST00000383738 MAP3K12Q12852 859 aa22.07■■□□□ 1.12
CSPG5-202ENST00000383738 UBAC1Q9BSL1 405 aa22.06■■□□□ 1.12
CSPG5-202ENST00000383738 GADD45BO75293 160 aaPredicted RBP22.06■■□□□ 1.12
CSPG5-202ENST00000383738 GCKRQ14397 625 aa22.06■■□□□ 1.12
CSPG5-202ENST00000383738 CDC5LQ99459 802 aaKnown RBP22.06■■□□□ 1.12
CSPG5-202ENST00000383738 MCM5P33992 734 aa22.06■■□□□ 1.12
CSPG5-202ENST00000383738 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
CSPG5-202ENST00000383738 GTF2F1P35269 517 aaKnown RBP eCLIP22.06■■□□□ 1.12
CSPG5-202ENST00000383738 MAP3K11Q16584 847 aa22.06■■□□□ 1.12
CSPG5-202ENST00000383738 ZSCAN25Q6NSZ9 544 aa22.06■■□□□ 1.12
CSPG5-202ENST00000383738 GOLGA6L1Q8N7Z2 621 aa22.06■■□□□ 1.12
CSPG5-202ENST00000383738 SPATA32Q96LK8 384 aa22.06■■□□□ 1.12
CSPG5-202ENST00000383738 USP5P45974 858 aa22.05■■□□□ 1.12
CSPG5-202ENST00000383738 CCDC129Q6ZRS4 1044 aa22.05■■□□□ 1.12
CSPG5-202ENST00000383738 UTP14AQ9BVJ6 771 aaKnown RBP22.05■■□□□ 1.12
CSPG5-202ENST00000383738 GLI2P10070 1586 aa22.05■■□□□ 1.12
CSPG5-202ENST00000383738 CYP27B1O15528 508 aa22.05■■□□□ 1.12
CSPG5-202ENST00000383738 CCDC69A6NI79 296 aa22.05■■□□□ 1.12
CSPG5-202ENST00000383738 SLC9C2Q5TAH2 1124 aa22.05■■□□□ 1.12
CSPG5-202ENST00000383738 ANKRD18AQ8IVF6 992 aa22.05■■□□□ 1.12
CSPG5-202ENST00000383738 MIGA1Q8NAN2 632 aa22.05■■□□□ 1.12
CSPG5-202ENST00000383738 CCDC152Q4G0S7 254 aa22.04■■□□□ 1.12
CSPG5-202ENST00000383738 PLBD2Q8NHP8 589 aa22.04■■□□□ 1.12
CSPG5-202ENST00000383738 ESYT1Q9BSJ8 1104 aa22.04■■□□□ 1.12
CSPG5-202ENST00000383738 AATKQ6ZMQ8 1374 aa22.04■■□□□ 1.12
CSPG5-202ENST00000383738 CTDP1Q9Y5B0 961 aaPredicted RBP22.04■■□□□ 1.12
CSPG5-202ENST00000383738 PTGS1P23219 599 aa22.03■■□□□ 1.12
CSPG5-202ENST00000383738 NMIQ13287 307 aaPredicted RBP22.03■■□□□ 1.12
CSPG5-202ENST00000383738 SMARCC1Q92922 1105 aaPredicted RBP22.03■■□□□ 1.12
CSPG5-202ENST00000383738 U3KPZ7 1027 aaPredicted RBP22.03■■□□□ 1.12
CSPG5-202ENST00000383738 ZNF213O14771 459 aa22.03■■□□□ 1.12
CSPG5-202ENST00000383738 TPM3P06753 285 aa22.03■■□□□ 1.12
CSPG5-202ENST00000383738 KINO60870 393 aaKnown RBP22.03■■□□□ 1.12
CSPG5-202ENST00000383738 PRIMPOLQ96LW4 560 aa22.03■■□□□ 1.12
CSPG5-202ENST00000383738 CTNNA3Q9UI47 895 aa22.03■■□□□ 1.12
CSPG5-202ENST00000383738 ATP7BP35670 1465 aa22.03■■□□□ 1.12
CSPG5-202ENST00000383738 PTPN14Q15678 1187 aa22.02■■□□□ 1.12
CSPG5-202ENST00000383738 CLTCQ00610 1675 aaKnown RBP22.02■■□□□ 1.12
CSPG5-202ENST00000383738 SMIM5Q71RC9 77 aa22.02■■□□□ 1.12
CSPG5-202ENST00000383738 CLIP2Q9UDT6 1046 aa22.02■■□□□ 1.12
CSPG5-202ENST00000383738 RBM8AQ9Y5S9 174 aaKnown RBP22.02■■□□□ 1.12
CSPG5-202ENST00000383738 ITGA6P23229 1130 aa22.02■■□□□ 1.11
CSPG5-202ENST00000383738 IL15P40933 162 aaPredicted RBP22.02■■□□□ 1.11
CSPG5-202ENST00000383738 FAM173BQ6P4H8 233 aa22.02■■□□□ 1.11
CSPG5-202ENST00000383738 ARGLU1Q9NWB6 273 aaPredicted RBP22.02■■□□□ 1.11
CSPG5-202ENST00000383738 RIMBP2O15034 1052 aa22.01■■□□□ 1.11
CSPG5-202ENST00000383738 SYNMO15061 1565 aa22.01■■□□□ 1.11
CSPG5-202ENST00000383738 ME1P48163 572 aa22.01■■□□□ 1.11
CSPG5-202ENST00000383738 DNM1Q05193 864 aaKnown RBP22.01■■□□□ 1.11
CSPG5-202ENST00000383738 GPS2Q13227 327 aa22.01■■□□□ 1.11
CSPG5-202ENST00000383738 SMAP1Q8IYB5 467 aaPredicted RBP22.01■■□□□ 1.11
CSPG5-202ENST00000383738 USP26Q9BXU7 913 aa22.01■■□□□ 1.11
CSPG5-202ENST00000383738 ZBTB1Q9Y2K1 713 aa22.01■■□□□ 1.11
CSPG5-202ENST00000383738 POLR3DP05423 398 aaPredicted RBP22.01■■□□□ 1.11
CSPG5-202ENST00000383738 GPT2Q8TD30 523 aa22.01■■□□□ 1.11
CSPG5-202ENST00000383738 CCDC34Q96HJ3 373 aa22.01■■□□□ 1.11
CSPG5-202ENST00000383738 ADGRL3Q9HAR2 1447 aa22■■□□□ 1.11
CSPG5-202ENST00000383738 RIOK3O14730 519 aaKnown RBP22■■□□□ 1.11
CSPG5-202ENST00000383738 STX6O43752 255 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms