RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 PDIA6Q15084 440 aa16.61■□□□□ 0.25
NEK4-202ENST00000383721 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
NEK4-202ENST00000383721 ZSWIM6Q9HCJ5 1215 aa16.61■□□□□ 0.25
NEK4-202ENST00000383721 DDX21Q9NR30 783 aaKnown RBP eCLIP16.61■□□□□ 0.25
NEK4-202ENST00000383721 SLC39A6Q13433 755 aa16.61■□□□□ 0.25
NEK4-202ENST00000383721 NECTIN1Q15223 517 aa16.61■□□□□ 0.25
NEK4-202ENST00000383721 VPS53Q5VIR6 699 aa16.61■□□□□ 0.25
NEK4-202ENST00000383721 PIGBQ92521 554 aa16.61■□□□□ 0.25
NEK4-202ENST00000383721 EAF2Q96CJ1 260 aaPredicted RBP16.61■□□□□ 0.25
NEK4-202ENST00000383721 TM6SF1Q9BZW5 370 aa16.61■□□□□ 0.25
NEK4-202ENST00000383721 ERVV-2B6SEH9 535 aa16.6■□□□□ 0.25
NEK4-202ENST00000383721 ZNF500O60304 480 aaPredicted RBP16.6■□□□□ 0.25
NEK4-202ENST00000383721 PHF14O94880 888 aa16.6■□□□□ 0.25
NEK4-202ENST00000383721 AIMP1Q12904 312 aaKnown RBP16.6■□□□□ 0.25
NEK4-202ENST00000383721 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
NEK4-202ENST00000383721 MRC1P22897 1456 aa16.6■□□□□ 0.25
NEK4-202ENST00000383721 F13A1P00488 732 aa16.6■□□□□ 0.25
NEK4-202ENST00000383721 ZKSCAN5Q9Y2L8 839 aa16.6■□□□□ 0.25
NEK4-202ENST00000383721 CCDC171Q6TFL3 1326 aa16.6■□□□□ 0.25
NEK4-202ENST00000383721 DTNBO60941 627 aa16.59■□□□□ 0.25
NEK4-202ENST00000383721 DDX58O95786 925 aaKnown RBP16.59■□□□□ 0.25
NEK4-202ENST00000383721 CCDC83Q8IWF9 413 aa16.59■□□□□ 0.25
NEK4-202ENST00000383721 FAM227BQ96M60 508 aa16.59■□□□□ 0.25
NEK4-202ENST00000383721 TMOD3Q9NYL9 352 aa16.59■□□□□ 0.25
NEK4-202ENST00000383721 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
NEK4-202ENST00000383721 CCDC8Q9H0W5 538 aaPredicted RBP16.59■□□□□ 0.25
NEK4-202ENST00000383721 CYP46A1Q9Y6A2 500 aa16.59■□□□□ 0.25
NEK4-202ENST00000383721 ITGB4P16144 1822 aa16.59■□□□□ 0.25
NEK4-202ENST00000383721 ST3GAL1Q11201 340 aa16.58■□□□□ 0.25
NEK4-202ENST00000383721 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.25
NEK4-202ENST00000383721 TLR7Q9NYK1 1049 aaKnown RBP16.58■□□□□ 0.25
NEK4-202ENST00000383721 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
NEK4-202ENST00000383721 BCL9O00512 1426 aa16.58■□□□□ 0.24
NEK4-202ENST00000383721 GJB2P29033 226 aa16.58■□□□□ 0.24
NEK4-202ENST00000383721 NMIQ13287 307 aaPredicted RBP16.58■□□□□ 0.24
NEK4-202ENST00000383721 FAM196AQ6ZSG2 479 aa16.58■□□□□ 0.24
NEK4-202ENST00000383721 CCDC39Q9UFE4 941 aa16.58■□□□□ 0.24
NEK4-202ENST00000383721 RBM8AQ9Y5S9 174 aaKnown RBP16.58■□□□□ 0.24
NEK4-202ENST00000383721 TRIM37O94972 964 aa16.57■□□□□ 0.24
NEK4-202ENST00000383721 TPM2P07951 284 aa16.57■□□□□ 0.24
NEK4-202ENST00000383721 CCDC183Q5T5S1 534 aa16.57■□□□□ 0.24
NEK4-202ENST00000383721 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.57■□□□□ 0.24
NEK4-202ENST00000383721 MAP4K1Q92918 833 aa16.57■□□□□ 0.24
NEK4-202ENST00000383721 ZSCAN31Q96LW9 406 aaPredicted RBP16.57■□□□□ 0.24
NEK4-202ENST00000383721 ASAP1Q9ULH1 1129 aa16.57■□□□□ 0.24
NEK4-202ENST00000383721 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
NEK4-202ENST00000383721 UBE2HP62256 183 aa16.57■□□□□ 0.24
NEK4-202ENST00000383721 CREB3L3Q68CJ9 461 aa16.57■□□□□ 0.24
NEK4-202ENST00000383721 SH2B1Q9NRF2 756 aaPredicted RBP16.57■□□□□ 0.24
NEK4-202ENST00000383721 COL9A3Q14050 684 aaPredicted RBP16.56■□□□□ 0.24
NEK4-202ENST00000383721 ME3Q16798 604 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 SIL1Q9H173 461 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 FIBPO43427 364 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 ZKSCAN1P17029 563 aaPredicted RBP16.56■□□□□ 0.24
NEK4-202ENST00000383721 MCM5P33992 734 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 RIC3Q7Z5B4 369 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 KLHDC4Q8TBB5 520 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 ATP6V1DQ9Y5K8 247 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 SBF2Q86WG5 1849 aa16.56■□□□□ 0.24
NEK4-202ENST00000383721 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
NEK4-202ENST00000383721 A0A0D9SFI3 127 aa16.55■□□□□ 0.24
NEK4-202ENST00000383721 HIP1O00291 1037 aa16.55■□□□□ 0.24
NEK4-202ENST00000383721 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
NEK4-202ENST00000383721 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
NEK4-202ENST00000383721 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
NEK4-202ENST00000383721 NEURL1BA8MQ27 555 aa16.54■□□□□ 0.24
NEK4-202ENST00000383721 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
NEK4-202ENST00000383721 FAM184AQ8NB25 1140 aa16.54■□□□□ 0.24
NEK4-202ENST00000383721 ATG3Q9NT62 314 aa16.54■□□□□ 0.24
NEK4-202ENST00000383721 TPCN1Q9ULQ1 816 aa16.54■□□□□ 0.24
NEK4-202ENST00000383721 SLC27A2O14975 620 aa16.54■□□□□ 0.24
NEK4-202ENST00000383721 MYL6BP14649 208 aa16.54■□□□□ 0.24
NEK4-202ENST00000383721 KCNJ4P48050 445 aa16.54■□□□□ 0.24
NEK4-202ENST00000383721 DNM1Q05193 864 aaKnown RBP16.54■□□□□ 0.24
NEK4-202ENST00000383721 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
NEK4-202ENST00000383721 PTCD1O75127 700 aaKnown RBP16.53■□□□□ 0.24
NEK4-202ENST00000383721 GCKRQ14397 625 aa16.53■□□□□ 0.24
NEK4-202ENST00000383721 XAGE3Q8WTP9 111 aa16.53■□□□□ 0.24
NEK4-202ENST00000383721 TCHHQ07283 1943 aa16.53■□□□□ 0.24
NEK4-202ENST00000383721 UVSSAQ2YD98 709 aa16.53■□□□□ 0.24
NEK4-202ENST00000383721 FSD1Q9BTV5 496 aa16.53■□□□□ 0.24
NEK4-202ENST00000383721 LETM1O95202 739 aaPredicted RBP16.52■□□□□ 0.24
NEK4-202ENST00000383721 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
NEK4-202ENST00000383721 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
NEK4-202ENST00000383721 TAF6LQ9Y6J9 622 aa16.52■□□□□ 0.24
NEK4-202ENST00000383721 MED23Q9ULK4 1368 aa16.52■□□□□ 0.24
NEK4-202ENST00000383721 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.23
NEK4-202ENST00000383721 MYD88Q99836 296 aa16.52■□□□□ 0.23
NEK4-202ENST00000383721 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.23
NEK4-202ENST00000383721 VPS37CA5D8V6 355 aaPredicted RBP16.51■□□□□ 0.23
NEK4-202ENST00000383721 RRP9O43818 475 aaKnown RBP16.51■□□□□ 0.23
NEK4-202ENST00000383721 TERF1P54274 439 aa16.51■□□□□ 0.23
NEK4-202ENST00000383721 METTL22Q9BUU2 404 aaPredicted RBP16.51■□□□□ 0.23
NEK4-202ENST00000383721 BTAF1O14981 1849 aa16.51■□□□□ 0.23
NEK4-202ENST00000383721 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
NEK4-202ENST00000383721 HSP90AA2PQ14568 343 aaPredicted RBP16.51■□□□□ 0.23
NEK4-202ENST00000383721 TTC5Q8N0Z6 440 aa16.51■□□□□ 0.23
NEK4-202ENST00000383721 R3HCC1Q9Y3T6 440 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms