RNA–Protein interactions for RNA: ENST00000383693.7

LNP1-201, Transcript of leukemia NUP98 fusion partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LNP1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1-201ENST00000383693 GPATCH3Q96I76 525 aa15.93■□□□□ 0.14
LNP1-201ENST00000383693 PPP1R9BQ96SB3 815 aa15.93■□□□□ 0.14
LNP1-201ENST00000383693 TRPC5Q9UL62 973 aaPredicted RBP15.93■□□□□ 0.14
LNP1-201ENST00000383693 RPAP1Q9BWH6 1393 aaPredicted RBP15.93■□□□□ 0.14
LNP1-201ENST00000383693 TCHHQ07283 1943 aa15.93■□□□□ 0.14
LNP1-201ENST00000383693 SBF2Q86WG5 1849 aa15.93■□□□□ 0.14
LNP1-201ENST00000383693 CASTP20810 708 aaKnown RBP15.92■□□□□ 0.14
LNP1-201ENST00000383693 CCDC173Q0VFZ6 552 aa15.92■□□□□ 0.14
LNP1-201ENST00000383693 GCKRQ14397 625 aa15.92■□□□□ 0.14
LNP1-201ENST00000383693 ADCK5Q3MIX3 580 aa15.92■□□□□ 0.14
LNP1-201ENST00000383693 RUFY2Q8WXA3 655 aa15.92■□□□□ 0.14
LNP1-201ENST00000383693 TRIM44Q96DX7 344 aaPredicted RBP15.92■□□□□ 0.14
LNP1-201ENST00000383693 QTRT2Q9H974 415 aaKnown RBP15.92■□□□□ 0.14
LNP1-201ENST00000383693 AFDNP55196 1824 aaKnown RBP15.92■□□□□ 0.14
LNP1-201ENST00000383693 PRPF40BQ6NWY9 871 aaKnown RBP15.92■□□□□ 0.14
LNP1-201ENST00000383693 MYD88Q99836 296 aa15.92■□□□□ 0.14
LNP1-201ENST00000383693 NUP188Q5SRE5 1749 aa15.92■□□□□ 0.14
LNP1-201ENST00000383693 BTAF1O14981 1849 aa15.91■□□□□ 0.14
LNP1-201ENST00000383693 SYCE3A1L190 88 aa15.91■□□□□ 0.14
LNP1-201ENST00000383693 JARID2Q92833 1246 aaPredicted RBP15.91■□□□□ 0.14
LNP1-201ENST00000383693 FAM227BQ96M60 508 aa15.91■□□□□ 0.14
LNP1-201ENST00000383693 METTL22Q9BUU2 404 aaPredicted RBP15.91■□□□□ 0.14
LNP1-201ENST00000383693 GDPD2Q9HCC8 539 aa15.91■□□□□ 0.14
LNP1-201ENST00000383693 LIMCH1Q9UPQ0 1083 aa15.91■□□□□ 0.14
LNP1-201ENST00000383693 WDR33Q9C0J8 1336 aaKnown RBP15.91■□□□□ 0.14
LNP1-201ENST00000383693 LARGE1O95461 756 aa15.91■□□□□ 0.14
LNP1-201ENST00000383693 NEXNQ0ZGT2 675 aa15.91■□□□□ 0.14
LNP1-201ENST00000383693 NECTIN1Q15223 517 aa15.9■□□□□ 0.14
LNP1-201ENST00000383693 GADD45BO75293 160 aaPredicted RBP15.9■□□□□ 0.14
LNP1-201ENST00000383693 MBD3O95983 291 aa15.9■□□□□ 0.14
LNP1-201ENST00000383693 ANKRD13DQ6ZTN6 518 aa15.9■□□□□ 0.14
LNP1-201ENST00000383693 KCNB2Q92953 911 aa15.9■□□□□ 0.14
LNP1-201ENST00000383693 NHSQ6T4R5 1651 aa15.89■□□□□ 0.14
LNP1-201ENST00000383693 CCDC171Q6TFL3 1326 aa15.89■□□□□ 0.13
LNP1-201ENST00000383693 DTNBO60941 627 aa15.89■□□□□ 0.13
LNP1-201ENST00000383693 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
LNP1-201ENST00000383693 LRSAM1Q6UWE0 723 aa15.89■□□□□ 0.13
LNP1-201ENST00000383693 SEPT12Q8IYM1 358 aa15.89■□□□□ 0.13
LNP1-201ENST00000383693 JAKMIP1Q96N16 626 aaKnown RBP15.89■□□□□ 0.13
LNP1-201ENST00000383693 BOLA2Q9H3K6 86 aa15.89■□□□□ 0.13
LNP1-201ENST00000383693 TTLL7Q6ZT98 887 aa15.88■□□□□ 0.13
LNP1-201ENST00000383693 ZSWIM6Q9HCJ5 1215 aa15.88■□□□□ 0.13
LNP1-201ENST00000383693 COL9A3Q14050 684 aaPredicted RBP15.88■□□□□ 0.13
LNP1-201ENST00000383693 USP48Q86UV5 1035 aa15.88■□□□□ 0.13
LNP1-201ENST00000383693 VSIG10Q8N0Z9 540 aa15.88■□□□□ 0.13
LNP1-201ENST00000383693 MYH14Q7Z406 1995 aaKnown RBP15.88■□□□□ 0.13
LNP1-201ENST00000383693 ONECUT3O60422 494 aaPredicted RBP15.87■□□□□ 0.13
LNP1-201ENST00000383693 SYT1P21579 422 aa15.87■□□□□ 0.13
LNP1-201ENST00000383693 ANP32BQ92688 251 aaKnown RBP15.87■□□□□ 0.13
LNP1-201ENST00000383693 PDRG1Q9NUG6 133 aa15.87■□□□□ 0.13
LNP1-201ENST00000383693 RBM8AQ9Y5S9 174 aaKnown RBP15.87■□□□□ 0.13
LNP1-201ENST00000383693 A0A0D9SFI3 127 aa15.87■□□□□ 0.13
LNP1-201ENST00000383693 VPS53Q5VIR6 699 aa15.87■□□□□ 0.13
LNP1-201ENST00000383693 MAP4K1Q92918 833 aa15.87■□□□□ 0.13
LNP1-201ENST00000383693 TM6SF1Q9BZW5 370 aa15.87■□□□□ 0.13
LNP1-201ENST00000383693 ZNF330Q9Y3S2 320 aaPredicted RBP15.87■□□□□ 0.13
LNP1-201ENST00000383693 PALLDQ8WX93 1383 aa15.87■□□□□ 0.13
LNP1-201ENST00000383693 ZSCAN22P10073 491 aaPredicted RBP15.86■□□□□ 0.13
LNP1-201ENST00000383693 CYP19A1P11511 503 aaPredicted RBP15.86■□□□□ 0.13
LNP1-201ENST00000383693 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
LNP1-201ENST00000383693 CREB3L3Q68CJ9 461 aa15.86■□□□□ 0.13
LNP1-201ENST00000383693 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
LNP1-201ENST00000383693 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
LNP1-201ENST00000383693 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
LNP1-201ENST00000383693 STX6O43752 255 aa15.86■□□□□ 0.13
LNP1-201ENST00000383693 ST3GAL1Q11201 340 aa15.86■□□□□ 0.13
LNP1-201ENST00000383693 CCDC83Q8IWF9 413 aa15.86■□□□□ 0.13
LNP1-201ENST00000383693 EDC3Q96F86 508 aaKnown RBP15.86■□□□□ 0.13
LNP1-201ENST00000383693 FSD1Q9BTV5 496 aa15.86■□□□□ 0.13
LNP1-201ENST00000383693 SNRKQ9NRH2 765 aa15.86■□□□□ 0.13
LNP1-201ENST00000383693 SMC3Q9UQE7 1217 aa15.86■□□□□ 0.13
LNP1-201ENST00000383693 CYP46A1Q9Y6A2 500 aa15.86■□□□□ 0.13
LNP1-201ENST00000383693 PTPN12Q05209 780 aaKnown RBP15.85■□□□□ 0.13
LNP1-201ENST00000383693 UBE3BQ7Z3V4 1068 aa15.85■□□□□ 0.13
LNP1-201ENST00000383693 COPRSQ9NQ92 184 aa15.85■□□□□ 0.13
LNP1-201ENST00000383693 CNPY2Q9Y2B0 182 aa15.85■□□□□ 0.13
LNP1-201ENST00000383693 LOC102724428A0A0B4J2F2 783 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 HIP1O00291 1037 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 KCNQ4P56696 695 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 SIK1P57059 783 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 ITPK1Q13572 414 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 ZBTB1Q9Y2K1 713 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 CICQ96RK0 1608 aaPredicted RBP15.84■□□□□ 0.13
LNP1-201ENST00000383693 SLC27A2O14975 620 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 STARD3NLO95772 234 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 ZKSCAN1P17029 563 aaPredicted RBP15.84■□□□□ 0.13
LNP1-201ENST00000383693 ME3Q16798 604 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 PDLIM2Q96JY6 352 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 TEX13AQ9BXU3 409 aaPredicted RBP15.84■□□□□ 0.13
LNP1-201ENST00000383693 ZBTB3Q9H5J0 574 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 DBNLQ9UJU6 430 aaKnown RBP15.84■□□□□ 0.13
LNP1-201ENST00000383693 TAF6LQ9Y6J9 622 aa15.84■□□□□ 0.13
LNP1-201ENST00000383693 GJB2P29033 226 aa15.83■□□□□ 0.13
LNP1-201ENST00000383693 ATP6V1AP38606 617 aa15.83■□□□□ 0.13
LNP1-201ENST00000383693 KCNJ4P48050 445 aa15.83■□□□□ 0.13
LNP1-201ENST00000383693 TFCP2Q12800 502 aa15.83■□□□□ 0.13
LNP1-201ENST00000383693 ZNF589Q86UQ0 364 aaPredicted RBP15.83■□□□□ 0.13
LNP1-201ENST00000383693 TMEM87AQ8NBN3 555 aa15.83■□□□□ 0.13
LNP1-201ENST00000383693 RREB1Q92766 1687 aa15.83■□□□□ 0.12
LNP1-201ENST00000383693 MED23Q9ULK4 1368 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms