RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 YEATS4O95619 227 aa14.84□□□□□ -0.03
ABCA3-202ENST00000382381 ORAI2Q96SN7 254 aa14.84□□□□□ -0.03
ABCA3-202ENST00000382381 ORC3Q9UBD5 711 aaPredicted RBP14.84□□□□□ -0.03
ABCA3-202ENST00000382381 ADCY5O95622 1261 aa14.84□□□□□ -0.03
ABCA3-202ENST00000382381 PTGS1P23219 599 aa14.84□□□□□ -0.03
ABCA3-202ENST00000382381 BICD1Q96G01 975 aa14.84□□□□□ -0.03
ABCA3-202ENST00000382381 CIZ1Q9ULV3 898 aaPredicted RBP14.84□□□□□ -0.03
ABCA3-202ENST00000382381 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
ABCA3-202ENST00000382381 TTC21BQ7Z4L5 1316 aa14.84□□□□□ -0.03
ABCA3-202ENST00000382381 SBNO2Q9Y2G9 1366 aa14.84□□□□□ -0.03
ABCA3-202ENST00000382381 CCDC150Q8NCX0 1101 aa14.83□□□□□ -0.03
ABCA3-202ENST00000382381 HOMER2Q9NSB8 354 aa14.83□□□□□ -0.03
ABCA3-202ENST00000382381 USO1O60763 962 aaKnown RBP14.83□□□□□ -0.04
ABCA3-202ENST00000382381 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.04
ABCA3-202ENST00000382381 UGGT2Q9NYU1 1516 aa14.83□□□□□ -0.04
ABCA3-202ENST00000382381 PAIP2Q9BPZ3 127 aaKnown RBP14.83□□□□□ -0.04
ABCA3-202ENST00000382381 DISP3Q9P2K9 1392 aa14.83□□□□□ -0.04
ABCA3-202ENST00000382381 ARID5AQ03989 594 aa14.83□□□□□ -0.04
ABCA3-202ENST00000382381 RAB34Q9BZG1 259 aa14.83□□□□□ -0.04
ABCA3-202ENST00000382381 SCAF11Q99590 1463 aaKnown RBP14.83□□□□□ -0.04
ABCA3-202ENST00000382381 UBA7P41226 1012 aa14.82□□□□□ -0.04
ABCA3-202ENST00000382381 TFCP2L1Q9NZI6 479 aa14.82□□□□□ -0.04
ABCA3-202ENST00000382381 JAG2Q9Y219 1238 aa14.82□□□□□ -0.04
ABCA3-202ENST00000382381 PI4KAP2A4QPH2 592 aa14.82□□□□□ -0.04
ABCA3-202ENST00000382381 PI4KAP1Q8N8J0 262 aa14.82□□□□□ -0.04
ABCA3-202ENST00000382381 GPATCH11Q8N954 259 aa14.82□□□□□ -0.04
ABCA3-202ENST00000382381 TCP11L1Q9NUJ3 509 aa14.82□□□□□ -0.04
ABCA3-202ENST00000382381 PICALMQ13492 652 aa14.82□□□□□ -0.04
ABCA3-202ENST00000382381 KAT14Q9H8E8 782 aa14.82□□□□□ -0.04
ABCA3-202ENST00000382381 TRIM27P14373 513 aa14.81□□□□□ -0.04
ABCA3-202ENST00000382381 FLIIQ13045 1269 aa14.81□□□□□ -0.04
ABCA3-202ENST00000382381 CALML4Q96GE6 196 aa14.81□□□□□ -0.04
ABCA3-202ENST00000382381 HCLS1P14317 486 aaPredicted RBP14.81□□□□□ -0.04
ABCA3-202ENST00000382381 CTR9Q6PD62 1173 aa14.81□□□□□ -0.04
ABCA3-202ENST00000382381 METAP2P50579 478 aaKnown RBP eCLIP14.81□□□□□ -0.04
ABCA3-202ENST00000382381 TBC1D9Q6ZT07 1266 aa14.81□□□□□ -0.04
ABCA3-202ENST00000382381 VTI1AQ96AJ9 217 aa14.81□□□□□ -0.04
ABCA3-202ENST00000382381 TSPOAP1O95153 1857 aa14.81□□□□□ -0.04
ABCA3-202ENST00000382381 ITSN2Q9NZM3 1697 aa14.81□□□□□ -0.04
ABCA3-202ENST00000382381 LMAN1P49257 510 aa14.81□□□□□ -0.04
ABCA3-202ENST00000382381 SMARCC1Q92922 1105 aaPredicted RBP14.81□□□□□ -0.04
ABCA3-202ENST00000382381 GNG11P61952 73 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 CCDC12Q8WUD4 166 aaPredicted RBP14.8□□□□□ -0.04
ABCA3-202ENST00000382381 GBP3Q9H0R5 595 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 STX6O43752 255 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 CCDC175P0C221 793 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 ZNF165P49910 485 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 CHST3Q7LGC8 479 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 PPP1R42Q7Z4L9 355 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.8□□□□□ -0.04
ABCA3-202ENST00000382381 V9GYY5 206 aaPredicted RBP14.8□□□□□ -0.04
ABCA3-202ENST00000382381 PTPRKQ15262 1439 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 MAP9Q49MG5 647 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 NUP160Q12769 1436 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 BAG4O95429 457 aaKnown RBP14.8□□□□□ -0.04
ABCA3-202ENST00000382381 MARCKSP29966 332 aaPredicted RBP14.8□□□□□ -0.04
ABCA3-202ENST00000382381 PPP4R3BQ5MIZ7 849 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 MFSD6Q6ZSS7 791 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 TRIM47Q96LD4 638 aa14.8□□□□□ -0.04
ABCA3-202ENST00000382381 KAT6BQ8WYB5 2073 aa14.79□□□□□ -0.04
ABCA3-202ENST00000382381 STAMBPO95630 424 aa14.79□□□□□ -0.04
ABCA3-202ENST00000382381 BRF1Q92994 677 aa14.79□□□□□ -0.04
ABCA3-202ENST00000382381 APBB1IPQ7Z5R6 666 aaPredicted RBP14.79□□□□□ -0.04
ABCA3-202ENST00000382381 FAM212AQ96EL1 285 aa14.79□□□□□ -0.04
ABCA3-202ENST00000382381 ATP10AO60312 1499 aa14.79□□□□□ -0.04
ABCA3-202ENST00000382381 N4BP3O15049 544 aa14.79□□□□□ -0.04
ABCA3-202ENST00000382381 FAM98CQ17RN3 349 aaKnown RBP14.79□□□□□ -0.04
ABCA3-202ENST00000382381 RBM26Q5T8P6 1007 aaKnown RBP14.79□□□□□ -0.04
ABCA3-202ENST00000382381 NBPF6Q5VWK0 638 aa14.79□□□□□ -0.04
ABCA3-202ENST00000382381 NBPF5PQ86XG9 351 aaPredicted RBP14.79□□□□□ -0.04
ABCA3-202ENST00000382381 NBPF4Q96M43 638 aa14.79□□□□□ -0.04
ABCA3-202ENST00000382381 SH2B1Q9NRF2 756 aaPredicted RBP14.79□□□□□ -0.04
ABCA3-202ENST00000382381 TMEM110-MUSTN1A8MSY1 372 aa14.79□□□□□ -0.04
ABCA3-202ENST00000382381 GCOM1H8Y6P7 765 aaPredicted RBP14.78□□□□□ -0.04
ABCA3-202ENST00000382381 MYZAPP0CAP1 466 aa14.78□□□□□ -0.04
ABCA3-202ENST00000382381 SYNCQ9H7C4 482 aa14.78□□□□□ -0.04
ABCA3-202ENST00000382381 RNF41Q9H4P4 317 aaPredicted RBP14.78□□□□□ -0.04
ABCA3-202ENST00000382381 WDHD1O75717 1129 aaPredicted RBP14.78□□□□□ -0.04
ABCA3-202ENST00000382381 SP4Q02446 784 aa14.78□□□□□ -0.04
ABCA3-202ENST00000382381 PPARDQ03181 441 aa14.78□□□□□ -0.04
ABCA3-202ENST00000382381 SNW1Q13573 536 aaKnown RBP14.78□□□□□ -0.04
ABCA3-202ENST00000382381 PLS1Q14651 629 aa14.78□□□□□ -0.04
ABCA3-202ENST00000382381 PPP1R14CQ8TAE6 165 aa14.78□□□□□ -0.04
ABCA3-202ENST00000382381 NEK1Q96PY6 1258 aa14.78□□□□□ -0.04
ABCA3-202ENST00000382381 ECHDC1Q9NTX5 307 aa14.78□□□□□ -0.04
ABCA3-202ENST00000382381 DBF4Q9UBU7 674 aaPredicted RBP14.78□□□□□ -0.04
ABCA3-202ENST00000382381 IL2RBP14784 551 aa14.77□□□□□ -0.04
ABCA3-202ENST00000382381 KLF18A0A0U1RQI7 1052 aa14.77□□□□□ -0.04
ABCA3-202ENST00000382381 FSD2A1L4K1 749 aa14.77□□□□□ -0.04
ABCA3-202ENST00000382381 AKR1B10O60218 316 aa14.77□□□□□ -0.04
ABCA3-202ENST00000382381 FGFR1OPO95684 399 aaKnown RBP14.77□□□□□ -0.04
ABCA3-202ENST00000382381 HMGB2P26583 209 aaKnown RBP14.77□□□□□ -0.04
ABCA3-202ENST00000382381 HEATR3Q7Z4Q2 680 aa14.77□□□□□ -0.04
ABCA3-202ENST00000382381 PLIN2Q99541 437 aa14.77□□□□□ -0.04
ABCA3-202ENST00000382381 CETN1Q12798 172 aa14.77□□□□□ -0.04
ABCA3-202ENST00000382381 RRAGBQ5VZM2 374 aa14.77□□□□□ -0.05
ABCA3-202ENST00000382381 ZBTB21Q9ULJ3 1066 aa14.77□□□□□ -0.05
ABCA3-202ENST00000382381 ALS2CR12Q96Q35 445 aa14.77□□□□□ -0.05
ABCA3-202ENST00000382381 CABP5Q9NP86 173 aa14.77□□□□□ -0.05
ABCA3-202ENST00000382381 SMIM23A6NLE4 172 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms