RNA–Protein interactions for RNA: ENST00000382043.8

NIN-204, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 4,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-204ENST00000382043 BRPF3Q9ULD4 1205 aa8.16□□□□□ -1.1
NIN-204ENST00000382043 TSPY2A6NKD2 308 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 MRE11P49959 708 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 MFSD6Q6ZSS7 791 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 CARD10Q9BWT7 1032 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 VAT1LQ9HCJ6 419 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 UNC13BO14795 1591 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 WDR17Q8IZU2 1322 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 KDM2BQ8NHM5 1336 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 GJB2P29033 226 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 JMYQ8N9B5 988 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 CTCFLQ8NI51 663 aaPredicted RBP8.15□□□□□ -1.1
NIN-204ENST00000382043 ZC3H12CQ9C0D7 883 aaKnown RBP8.15□□□□□ -1.1
NIN-204ENST00000382043 SH2B1Q9NRF2 756 aaPredicted RBP8.15□□□□□ -1.1
NIN-204ENST00000382043 SLC4A4Q9Y6R1 1079 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 ALKQ9UM73 1620 aa8.15□□□□□ -1.1
NIN-204ENST00000382043 HMGB1P09429 215 aaKnown RBP8.15□□□□□ -1.11
NIN-204ENST00000382043 BRPF1P55201 1214 aaPredicted RBP8.15□□□□□ -1.11
NIN-204ENST00000382043 NAA16Q6N069 864 aaPredicted RBP8.15□□□□□ -1.11
NIN-204ENST00000382043 CCAR2Q8N163 923 aaKnown RBP8.15□□□□□ -1.11
NIN-204ENST00000382043 SYNMO15061 1565 aa8.15□□□□□ -1.11
NIN-204ENST00000382043 CEP152O94986 1710 aa8.15□□□□□ -1.11
NIN-204ENST00000382043 E9PCH4 1651 aa8.15□□□□□ -1.11
NIN-204ENST00000382043 SYCE3A1L190 88 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 GOLGA8AA7E2F4 631 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 TNNI3KQ59H18 835 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 MAGEB6Q8N7X4 407 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 CNBD1Q8NA66 436 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 ANKRD20A12PQ8NF67 263 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 FAM227BQ96M60 508 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 ZHX3Q9H4I2 956 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 CFAP45Q9UL16 551 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 ZBTB1Q9Y2K1 713 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 FPGT-TNNI3KV9GXZ4 949 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 ABCC4O15439 1325 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 TTC41PQ6P2S7 1318 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 CYP27B1O15528 508 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 SSBP05455 408 aaKnown RBP eCLIP8.14□□□□□ -1.11
NIN-204ENST00000382043 TPM3P06753 285 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 TPM1P09493 284 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 HMGB2P26583 209 aaKnown RBP8.14□□□□□ -1.11
NIN-204ENST00000382043 TCIRG1Q13488 830 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 BEND3Q5T5X7 828 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 OLFM4Q6UX06 510 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 SPC24Q8NBT2 197 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 CDK5RAP3Q96JB5 506 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 SPATA31A3Q5VYP0 1347 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 LOC102724428A0A0B4J2F2 783 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 KLF18A0A0U1RQI7 1052 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 BAG3O95817 575 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 SIK1P57059 783 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 CCAR1Q8IX12 1150 aaKnown RBP8.14□□□□□ -1.11
NIN-204ENST00000382043 NCOA7Q8NI08 942 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 NYXQ9GZU5 481 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 TSPY26PQ9H489 355 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 RNF41Q9H4P4 317 aaPredicted RBP8.14□□□□□ -1.11
NIN-204ENST00000382043 ORC3Q9UBD5 711 aaPredicted RBP8.14□□□□□ -1.11
NIN-204ENST00000382043 PICALMQ13492 652 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 GLIPR1L2Q4G1C9 344 aa8.14□□□□□ -1.11
NIN-204ENST00000382043 SPHKAPQ2M3C7 1700 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 STX6O43752 255 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 APBA3O96018 575 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 LDHCP07864 332 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 TXLNAP40222 546 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 PDILTQ8N807 584 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 RTL1A6NKG5 1358 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 TRPM1Q7Z4N2 1603 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 DIP2CQ9Y2E4 1556 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 ADGRL3Q9HAR2 1447 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 PDE8AO60658 829 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 TPM2P07951 284 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 ZFYP08048 801 aaPredicted RBP8.13□□□□□ -1.11
NIN-204ENST00000382043 ZNF853P0CG23 659 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 CCDC96Q2M329 555 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 ZGPATQ8N5A5 531 aaKnown RBP8.13□□□□□ -1.11
NIN-204ENST00000382043 XAGE2Q96GT9 111 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 PANK2Q9BZ23 570 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
NIN-204ENST00000382043 ZNF287Q9HBT7 754 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 SMC2O95347 1197 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 RXRAP19793 462 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 MCM5P33992 734 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 DHX8Q14562 1220 aaKnown RBP8.13□□□□□ -1.11
NIN-204ENST00000382043 Q6ZUG5 572 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 HOMER1Q86YM7 354 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 EAF2Q96CJ1 260 aaPredicted RBP8.13□□□□□ -1.11
NIN-204ENST00000382043 NAT10Q9H0A0 1025 aaKnown RBP8.13□□□□□ -1.11
NIN-204ENST00000382043 GLI2P10070 1586 aa8.13□□□□□ -1.11
NIN-204ENST00000382043 CCDC196A0A1B0GTZ2 297 aa8.12□□□□□ -1.11
NIN-204ENST00000382043 IARSP41252 1262 aaKnown RBP8.12□□□□□ -1.11
NIN-204ENST00000382043 USP26Q9BXU7 913 aa8.12□□□□□ -1.11
NIN-204ENST00000382043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.12□□□□□ -1.11
NIN-204ENST00000382043 RNF113AO15541 343 aaKnown RBP8.12□□□□□ -1.11
NIN-204ENST00000382043 KRT18P05783 430 aaKnown RBP8.12□□□□□ -1.11
NIN-204ENST00000382043 CCDC192P0DO97 292 aa8.12□□□□□ -1.11
NIN-204ENST00000382043 METAP2P50579 478 aaKnown RBP eCLIP8.12□□□□□ -1.11
NIN-204ENST00000382043 CREB3L3Q68CJ9 461 aa8.12□□□□□ -1.11
NIN-204ENST00000382043 MSL1Q68DK7 614 aa8.12□□□□□ -1.11
NIN-204ENST00000382043 CATIPQ7Z7H3 387 aa8.12□□□□□ -1.11
NIN-204ENST00000382043 SLC26A6Q9BXS9 759 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms