RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 POTEIP0CG38 1075 aa14.84□□□□□ -0.03
APOBEC3F-202ENST00000381565 POTEJP0CG39 1038 aa14.84□□□□□ -0.03
APOBEC3F-202ENST00000381565 RIC3Q7Z5B4 369 aa14.84□□□□□ -0.03
APOBEC3F-202ENST00000381565 STK31Q9BXU1 1019 aa14.84□□□□□ -0.03
APOBEC3F-202ENST00000381565 CHMP4AQ9BY43 222 aa14.84□□□□□ -0.03
APOBEC3F-202ENST00000381565 LTBP3Q9NS15 1303 aa14.84□□□□□ -0.03
APOBEC3F-202ENST00000381565 HCLS1P14317 486 aaPredicted RBP14.83□□□□□ -0.04
APOBEC3F-202ENST00000381565 HOXA10P31260 410 aaPredicted RBP14.83□□□□□ -0.04
APOBEC3F-202ENST00000381565 TRIM28Q13263 835 aaKnown RBP14.83□□□□□ -0.04
APOBEC3F-202ENST00000381565 OLFM4Q6UX06 510 aa14.83□□□□□ -0.04
APOBEC3F-202ENST00000381565 MYD88Q99836 296 aa14.83□□□□□ -0.04
APOBEC3F-202ENST00000381565 TRMT112Q9UI30 125 aaKnown RBP14.83□□□□□ -0.04
APOBEC3F-202ENST00000381565 SH3TC1Q8TE82 1336 aa14.83□□□□□ -0.04
APOBEC3F-202ENST00000381565 A0A1B0GUL6 1792 aa14.83□□□□□ -0.04
APOBEC3F-202ENST00000381565 DUOX1Q9NRD9 1551 aa14.82□□□□□ -0.04
APOBEC3F-202ENST00000381565 PI4KAP2A4QPH2 592 aa14.82□□□□□ -0.04
APOBEC3F-202ENST00000381565 FLIIQ13045 1269 aa14.82□□□□□ -0.04
APOBEC3F-202ENST00000381565 PI4KAP1Q8N8J0 262 aa14.82□□□□□ -0.04
APOBEC3F-202ENST00000381565 CDCA7LQ96GN5 454 aa14.82□□□□□ -0.04
APOBEC3F-202ENST00000381565 METTL22Q9BUU2 404 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3F-202ENST00000381565 MAP3K2Q9Y2U5 619 aa14.82□□□□□ -0.04
APOBEC3F-202ENST00000381565 COL4A5P29400 1685 aa14.81□□□□□ -0.04
APOBEC3F-202ENST00000381565 DDX58O95786 925 aaKnown RBP14.81□□□□□ -0.04
APOBEC3F-202ENST00000381565 SLFN5Q08AF3 891 aa14.81□□□□□ -0.04
APOBEC3F-202ENST00000381565 KSR2Q6VAB6 950 aa14.81□□□□□ -0.04
APOBEC3F-202ENST00000381565 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
APOBEC3F-202ENST00000381565 FAM89AQ96GI7 184 aa14.81□□□□□ -0.04
APOBEC3F-202ENST00000381565 TAOK3Q9H2K8 898 aa14.81□□□□□ -0.04
APOBEC3F-202ENST00000381565 E9PSI1 815 aa14.8□□□□□ -0.04
APOBEC3F-202ENST00000381565 DDNO94850 711 aaPredicted RBP14.8□□□□□ -0.04
APOBEC3F-202ENST00000381565 IGKV5-2P06315 115 aa14.8□□□□□ -0.04
APOBEC3F-202ENST00000381565 CHADLQ6NUI6 762 aa14.8□□□□□ -0.04
APOBEC3F-202ENST00000381565 DPY19L2Q6NUT2 758 aa14.8□□□□□ -0.04
APOBEC3F-202ENST00000381565 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
APOBEC3F-202ENST00000381565 NLRP3Q96P20 1036 aa14.8□□□□□ -0.04
APOBEC3F-202ENST00000381565 ABCC4O15439 1325 aa14.8□□□□□ -0.04
APOBEC3F-202ENST00000381565 ALDH1B1P30837 517 aa14.79□□□□□ -0.04
APOBEC3F-202ENST00000381565 RTL5Q5HYW3 569 aaPredicted RBP14.79□□□□□ -0.04
APOBEC3F-202ENST00000381565 CCDC191Q8NCU4 936 aa14.79□□□□□ -0.04
APOBEC3F-202ENST00000381565 CRAMP1Q96RY5 1269 aa14.79□□□□□ -0.04
APOBEC3F-202ENST00000381565 CREBZFQ9NS37 354 aa14.79□□□□□ -0.04
APOBEC3F-202ENST00000381565 PASKQ96RG2 1323 aa14.78□□□□□ -0.04
APOBEC3F-202ENST00000381565 CCDC93Q567U6 631 aa14.78□□□□□ -0.04
APOBEC3F-202ENST00000381565 SOGA3Q5TF21 947 aa14.78□□□□□ -0.04
APOBEC3F-202ENST00000381565 ZBTB38Q8NAP3 1195 aaPredicted RBP14.78□□□□□ -0.04
APOBEC3F-202ENST00000381565 RBM17Q96I25 401 aaKnown RBP14.78□□□□□ -0.04
APOBEC3F-202ENST00000381565 CWC25Q9NXE8 425 aaPredicted RBP14.78□□□□□ -0.04
APOBEC3F-202ENST00000381565 MKRN1Q9UHC7 482 aaKnown RBP14.78□□□□□ -0.04
APOBEC3F-202ENST00000381565 NEURL1BA8MQ27 555 aa14.77□□□□□ -0.05
APOBEC3F-202ENST00000381565 PCCAP05165 728 aaPredicted RBP14.77□□□□□ -0.05
APOBEC3F-202ENST00000381565 FKBP5Q13451 457 aaPredicted RBP14.77□□□□□ -0.05
APOBEC3F-202ENST00000381565 CWF19L2Q2TBE0 894 aaKnown RBP14.77□□□□□ -0.05
APOBEC3F-202ENST00000381565 ADAMTSL1Q8N6G6 1762 aa14.77□□□□□ -0.05
APOBEC3F-202ENST00000381565 CNTNAP1P78357 1384 aa14.76□□□□□ -0.05
APOBEC3F-202ENST00000381565 CDHR2Q9BYE9 1310 aa14.76□□□□□ -0.05
APOBEC3F-202ENST00000381565 IRS4O14654 1257 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3F-202ENST00000381565 PPEF1O14829 653 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3F-202ENST00000381565 SF3B3Q15393 1217 aaKnown RBP14.76□□□□□ -0.05
APOBEC3F-202ENST00000381565 DNAAF4Q8WXU2 420 aa14.76□□□□□ -0.05
APOBEC3F-202ENST00000381565 JARID2Q92833 1246 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3F-202ENST00000381565 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
APOBEC3F-202ENST00000381565 SCN4AP35499 1836 aa14.76□□□□□ -0.05
APOBEC3F-202ENST00000381565 ZNF541Q9H0D2 1346 aa14.75□□□□□ -0.05
APOBEC3F-202ENST00000381565 FKBP4Q02790 459 aaKnown RBP eCLIP14.75□□□□□ -0.05
APOBEC3F-202ENST00000381565 PSME4Q14997 1843 aa14.75□□□□□ -0.05
APOBEC3F-202ENST00000381565 ZNF646O15015 1829 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3F-202ENST00000381565 F6X3S4 739 aa14.74□□□□□ -0.05
APOBEC3F-202ENST00000381565 FOXN1O15353 648 aa14.74□□□□□ -0.05
APOBEC3F-202ENST00000381565 NEXNQ0ZGT2 675 aa14.74□□□□□ -0.05
APOBEC3F-202ENST00000381565 GRAPQ13588 217 aa14.74□□□□□ -0.05
APOBEC3F-202ENST00000381565 MRPL50Q8N5N7 158 aaKnown RBP14.74□□□□□ -0.05
APOBEC3F-202ENST00000381565 GRAPLQ8TC17 118 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3F-202ENST00000381565 TAF1DQ9H5J8 278 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3F-202ENST00000381565 ITGBL1O95965 494 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 CASP7P55210 303 aa14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 GCKRQ14397 625 aa14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 DDX46Q7L014 1031 aaKnown RBP14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 LDHDQ86WU2 507 aa14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 RTKN2Q8IZC4 609 aa14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 SSH1Q8WYL5 1049 aa14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 CELF1Q92879 486 aaKnown RBP14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 PSMD1Q99460 953 aa14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 ZNF277Q9NRM2 450 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 ATP6V0A2Q9Y487 856 aa14.73□□□□□ -0.05
APOBEC3F-202ENST00000381565 BEND3Q5T5X7 828 aa14.72□□□□□ -0.05
APOBEC3F-202ENST00000381565 CC2D2BQ6DHV5 1058 aa14.72□□□□□ -0.05
APOBEC3F-202ENST00000381565 LINS1Q8NG48 757 aa14.72□□□□□ -0.05
APOBEC3F-202ENST00000381565 SCN9AQ15858 1988 aa14.72□□□□□ -0.05
APOBEC3F-202ENST00000381565 IQCA1LA6NCM1 817 aa14.71□□□□□ -0.05
APOBEC3F-202ENST00000381565 H7C1W4 665 aa14.71□□□□□ -0.05
APOBEC3F-202ENST00000381565 PDE8AO60658 829 aa14.71□□□□□ -0.05
APOBEC3F-202ENST00000381565 UBE3BQ7Z3V4 1068 aa14.71□□□□□ -0.05
APOBEC3F-202ENST00000381565 BCL2L13Q9BXK5 485 aa14.71□□□□□ -0.05
APOBEC3F-202ENST00000381565 SEC31BQ9NQW1 1179 aa14.71□□□□□ -0.05
APOBEC3F-202ENST00000381565 BBOX1O75936 387 aa14.7□□□□□ -0.06
APOBEC3F-202ENST00000381565 IARSP41252 1262 aaKnown RBP14.7□□□□□ -0.06
APOBEC3F-202ENST00000381565 VEGFBP49765 207 aa14.7□□□□□ -0.06
APOBEC3F-202ENST00000381565 HNRNPUQ00839 825 aaKnown RBP eCLIP14.7□□□□□ -0.06
APOBEC3F-202ENST00000381565 SP8Q8IXZ3 490 aa14.7□□□□□ -0.06
APOBEC3F-202ENST00000381565 RTL9Q8NET4 1388 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms