RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 FSD1Q9BTV5 496 aa19.37■□□□□ 0.69
NKX3-1-201ENST00000380871 SPATA31A3Q5VYP0 1347 aa19.37■□□□□ 0.69
NKX3-1-201ENST00000380871 RGPD5Q99666 1765 aa19.37■□□□□ 0.69
NKX3-1-201ENST00000380871 A0A0D9SFI3 127 aa19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 METTL22Q9BUU2 404 aaPredicted RBP19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 ATP6V1DQ9Y5K8 247 aa19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 MTX1Q13505 466 aa19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 TTLL7Q6ZT98 887 aa19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 TTC6Q86TZ1 520 aa19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 ZNF335Q9H4Z2 1342 aaPredicted RBP19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 MED1Q15648 1581 aaPredicted RBP19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 ZCRB1Q8TBF4 217 aaKnown RBP19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 HDAC5Q9UQL6 1122 aa19.36■□□□□ 0.69
NKX3-1-201ENST00000380871 CHGBP05060 677 aa19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 DNAJC2Q99543 621 aaKnown RBP19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 LIG1P18858 919 aa19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 ERC1Q8IUD2 1116 aa19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 KCNF1Q9H3M0 494 aa19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 SLIT3O75094 1523 aa19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 KDM3BQ7LBC6 1761 aa19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 ZNF142P52746 1687 aaPredicted RBP19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 STK3Q13188 491 aa19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 LARP1BQ659C4 914 aaKnown RBP19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 EVI5LQ96CN4 794 aa19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 PYCARDQ9ULZ3 195 aa19.35■□□□□ 0.69
NKX3-1-201ENST00000380871 NCAPD2Q15021 1401 aa19.34■□□□□ 0.69
NKX3-1-201ENST00000380871 LETM1O95202 739 aaPredicted RBP19.34■□□□□ 0.69
NKX3-1-201ENST00000380871 NEUROD6Q96NK8 337 aa19.34■□□□□ 0.69
NKX3-1-201ENST00000380871 SLC27A2O14975 620 aa19.34■□□□□ 0.69
NKX3-1-201ENST00000380871 ZKSCAN1P17029 563 aaPredicted RBP19.34■□□□□ 0.69
NKX3-1-201ENST00000380871 TFCP2Q12800 502 aa19.33■□□□□ 0.69
NKX3-1-201ENST00000380871 MYRIPQ8NFW9 859 aa19.33■□□□□ 0.69
NKX3-1-201ENST00000380871 SLAIN2Q9P270 581 aa19.33■□□□□ 0.69
NKX3-1-201ENST00000380871 LMBR1LQ6UX01 489 aa19.33■□□□□ 0.68
NKX3-1-201ENST00000380871 ZNF589Q86UQ0 364 aaPredicted RBP19.33■□□□□ 0.68
NKX3-1-201ENST00000380871 SH2B1Q9NRF2 756 aaPredicted RBP19.33■□□□□ 0.68
NKX3-1-201ENST00000380871 TFIP11Q9UBB9 837 aaKnown RBP19.33■□□□□ 0.68
NKX3-1-201ENST00000380871 HEG1Q9ULI3 1381 aa19.33■□□□□ 0.68
NKX3-1-201ENST00000380871 CKAP2LQ8IYA6 745 aa19.33■□□□□ 0.68
NKX3-1-201ENST00000380871 KCNB2Q92953 911 aa19.33■□□□□ 0.68
NKX3-1-201ENST00000380871 MAP4K1Q92918 833 aa19.32■□□□□ 0.68
NKX3-1-201ENST00000380871 TM6SF1Q9BZW5 370 aa19.32■□□□□ 0.68
NKX3-1-201ENST00000380871 KAT6BQ8WYB5 2073 aa19.32■□□□□ 0.68
NKX3-1-201ENST00000380871 ZSCAN31Q96LW9 406 aaPredicted RBP19.32■□□□□ 0.68
NKX3-1-201ENST00000380871 ZNF710Q8N1W2 664 aa19.31■□□□□ 0.68
NKX3-1-201ENST00000380871 NBPF26B4DH59 902 aa19.31■□□□□ 0.68
NKX3-1-201ENST00000380871 NBPF14Q5TI25 921 aa19.31■□□□□ 0.68
NKX3-1-201ENST00000380871 NBPF10Q6P3W6 841 aaKnown RBP19.31■□□□□ 0.68
NKX3-1-201ENST00000380871 LUZP1Q86V48 1076 aa19.31■□□□□ 0.68
NKX3-1-201ENST00000380871 NBPF15Q8N660 670 aa19.31■□□□□ 0.68
NKX3-1-201ENST00000380871 SYTL4Q96C24 671 aaPredicted RBP19.31■□□□□ 0.68
NKX3-1-201ENST00000380871 TNS3Q68CZ2 1445 aa19.3■□□□□ 0.68
NKX3-1-201ENST00000380871 ZNF594Q96JF6 807 aaPredicted RBP19.3■□□□□ 0.68
NKX3-1-201ENST00000380871 MAP7D2Q96T17 732 aa19.29■□□□□ 0.68
NKX3-1-201ENST00000380871 TOB2Q14106 344 aaPredicted RBP19.29■□□□□ 0.68
NKX3-1-201ENST00000380871 SLFNL1Q499Z3 407 aa19.29■□□□□ 0.68
NKX3-1-201ENST00000380871 DBNDD2Q9BQY9 259 aa19.29■□□□□ 0.68
NKX3-1-201ENST00000380871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.29■□□□□ 0.68
NKX3-1-201ENST00000380871 CCDC192P0DO97 292 aa19.28■□□□□ 0.68
NKX3-1-201ENST00000380871 KRT85P78386 507 aa19.28■□□□□ 0.68
NKX3-1-201ENST00000380871 PRDM10Q9NQV6 1147 aa19.28■□□□□ 0.68
NKX3-1-201ENST00000380871 SPTLC3Q9NUV7 552 aa19.28■□□□□ 0.68
NKX3-1-201ENST00000380871 DACT1Q9NYF0 836 aa19.28■□□□□ 0.68
NKX3-1-201ENST00000380871 MRVI1Q9Y6F6 885 aa19.28■□□□□ 0.68
NKX3-1-201ENST00000380871 BLOC1S2Q6QNY1 142 aa19.28■□□□□ 0.68
NKX3-1-201ENST00000380871 CCDC129Q6ZRS4 1044 aa19.28■□□□□ 0.68
NKX3-1-201ENST00000380871 DDX46Q7L014 1031 aaKnown RBP19.28■□□□□ 0.68
NKX3-1-201ENST00000380871 JAK2O60674 1132 aa19.27■□□□□ 0.68
NKX3-1-201ENST00000380871 USP54Q70EL1 1684 aa19.27■□□□□ 0.68
NKX3-1-201ENST00000380871 LMO7Q8WWI1 1683 aa19.27■□□□□ 0.68
NKX3-1-201ENST00000380871 KIAA1524Q8TCG1 905 aa19.27■□□□□ 0.68
NKX3-1-201ENST00000380871 NUP62CLQ9H1M0 184 aa19.27■□□□□ 0.68
NKX3-1-201ENST00000380871 PTGS1P23219 599 aa19.27■□□□□ 0.67
NKX3-1-201ENST00000380871 TIMM10P62072 90 aa19.27■□□□□ 0.67
NKX3-1-201ENST00000380871 TYRO3Q06418 890 aa19.27■□□□□ 0.67
NKX3-1-201ENST00000380871 DDX11Q96FC9 970 aa19.27■□□□□ 0.67
NKX3-1-201ENST00000380871 SEC62Q99442 399 aaKnown RBP19.27■□□□□ 0.67
NKX3-1-201ENST00000380871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.26■□□□□ 0.67
NKX3-1-201ENST00000380871 IL2RBP14784 551 aa19.26■□□□□ 0.67
NKX3-1-201ENST00000380871 PTPN12Q05209 780 aaKnown RBP19.26■□□□□ 0.67
NKX3-1-201ENST00000380871 DBNLQ9UJU6 430 aaKnown RBP19.26■□□□□ 0.67
NKX3-1-201ENST00000380871 RPS6KB1P23443 525 aa19.26■□□□□ 0.67
NKX3-1-201ENST00000380871 COL15A1P39059 1388 aa19.26■□□□□ 0.67
NKX3-1-201ENST00000380871 MAP3K11Q16584 847 aa19.26■□□□□ 0.67
NKX3-1-201ENST00000380871 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
NKX3-1-201ENST00000380871 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
NKX3-1-201ENST00000380871 ANO6Q4KMQ2 910 aa19.25■□□□□ 0.67
NKX3-1-201ENST00000380871 PLBD2Q8NHP8 589 aa19.25■□□□□ 0.67
NKX3-1-201ENST00000380871 PRIMPOLQ96LW4 560 aa19.25■□□□□ 0.67
NKX3-1-201ENST00000380871 LRP10Q7Z4F1 713 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 FAM200AQ8TCP9 573 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 SPATA32Q96LK8 384 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 LRRC2Q9BYS8 371 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 MED23Q9ULK4 1368 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 PSMA5P28066 241 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 LRMPQ12912 555 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 TNNI3KQ59H18 835 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 DNAJC5Q9H3Z4 198 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 NRBP1Q9UHY1 535 aa19.24■□□□□ 0.67
NKX3-1-201ENST00000380871 FPGT-TNNI3KV9GXZ4 949 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms