RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 CTSWP56202 376 aa15.92■□□□□ 0.14
SMN2-203ENST00000380743 DDX19BQ9UMR2 479 aa15.92■□□□□ 0.14
SMN2-203ENST00000380743 H0YIN7 160 aa15.91■□□□□ 0.14
SMN2-203ENST00000380743 SF3B3Q15393 1217 aaKnown RBP15.91■□□□□ 0.14
SMN2-203ENST00000380743 TTLL11Q8NHH1 800 aa15.91■□□□□ 0.14
SMN2-203ENST00000380743 CCDC85AQ96PX6 553 aaPredicted RBP15.91■□□□□ 0.14
SMN2-203ENST00000380743 BICC1Q9H694 974 aaKnown RBP15.91■□□□□ 0.14
SMN2-203ENST00000380743 LRRFIP2Q9Y608 721 aaKnown RBP15.91■□□□□ 0.14
SMN2-203ENST00000380743 LAMB2P55268 1798 aa15.91■□□□□ 0.14
SMN2-203ENST00000380743 CSF1RP07333 972 aa15.9■□□□□ 0.14
SMN2-203ENST00000380743 KIAA1551Q9HCM1 1747 aa15.9■□□□□ 0.14
SMN2-203ENST00000380743 COL11A2P13942 1736 aaPredicted RBP15.89■□□□□ 0.13
SMN2-203ENST00000380743 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 ANKRD44Q8N8A2 993 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 CRBNQ96SW2 442 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 ZBTB40Q9NUA8 1239 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 PDZRN3Q9UPQ7 1066 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 GNAI2P04899 355 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 NPR1P16066 1061 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 HOXA10P31260 410 aaPredicted RBP15.89■□□□□ 0.13
SMN2-203ENST00000380743 IRX6P78412 446 aaPredicted RBP15.89■□□□□ 0.13
SMN2-203ENST00000380743 RABL6Q3YEC7 729 aaPredicted RBP15.89■□□□□ 0.13
SMN2-203ENST00000380743 CCDC152Q4G0S7 254 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
SMN2-203ENST00000380743 ZNF622Q969S3 477 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMN2-203ENST00000380743 MASTLQ96GX5 879 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 GREM2Q9H772 168 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 C1orf115Q9H7X2 142 aa15.89■□□□□ 0.13
SMN2-203ENST00000380743 SEC31BQ9NQW1 1179 aa15.88■□□□□ 0.13
SMN2-203ENST00000380743 HDAC5Q9UQL6 1122 aa15.88■□□□□ 0.13
SMN2-203ENST00000380743 MYH3P11055 1940 aa15.87■□□□□ 0.13
SMN2-203ENST00000380743 FAM161AQ3B820 660 aa15.87■□□□□ 0.13
SMN2-203ENST00000380743 STYK1Q6J9G0 422 aa15.87■□□□□ 0.13
SMN2-203ENST00000380743 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
SMN2-203ENST00000380743 RBM17Q96I25 401 aaKnown RBP15.87■□□□□ 0.13
SMN2-203ENST00000380743 WWC3Q9ULE0 1092 aa15.87■□□□□ 0.13
SMN2-203ENST00000380743 CHMP3Q9Y3E7 222 aa15.87■□□□□ 0.13
SMN2-203ENST00000380743 PIM2Q9P1W9 311 aa15.86■□□□□ 0.13
SMN2-203ENST00000380743 RTL9Q8NET4 1388 aa15.85■□□□□ 0.13
SMN2-203ENST00000380743 COL4A1P02462 1669 aa15.85■□□□□ 0.13
SMN2-203ENST00000380743 ITGA6P23229 1130 aa15.85■□□□□ 0.13
SMN2-203ENST00000380743 EXOC6Q8TAG9 804 aa15.85■□□□□ 0.13
SMN2-203ENST00000380743 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
SMN2-203ENST00000380743 CRAMP1Q96RY5 1269 aa15.85■□□□□ 0.13
SMN2-203ENST00000380743 CHMP4BQ9H444 224 aaKnown RBP15.85■□□□□ 0.13
SMN2-203ENST00000380743 DLEC1Q9Y238 1755 aa15.85■□□□□ 0.13
SMN2-203ENST00000380743 TAF1P21675 1872 aa15.84■□□□□ 0.13
SMN2-203ENST00000380743 ALDH1B1P30837 517 aa15.84■□□□□ 0.13
SMN2-203ENST00000380743 TTLL6Q8N841 843 aa15.84■□□□□ 0.13
SMN2-203ENST00000380743 CNKSR1Q969H4 720 aa15.84■□□□□ 0.13
SMN2-203ENST00000380743 IFIT5Q13325 482 aaKnown RBP15.84■□□□□ 0.13
SMN2-203ENST00000380743 GRAPQ13588 217 aa15.84■□□□□ 0.13
SMN2-203ENST00000380743 PRPF40BQ6NWY9 871 aaKnown RBP15.84■□□□□ 0.13
SMN2-203ENST00000380743 GRAPLQ8TC17 118 aaPredicted RBP15.84■□□□□ 0.13
SMN2-203ENST00000380743 BRCA1P38398 1863 aaKnown RBP15.83■□□□□ 0.12
SMN2-203ENST00000380743 ANKRD18BA2A2Z9 1011 aa15.83■□□□□ 0.12
SMN2-203ENST00000380743 MTX1Q13505 466 aa15.83■□□□□ 0.12
SMN2-203ENST00000380743 CCDC57Q2TAC2 916 aa15.83■□□□□ 0.12
SMN2-203ENST00000380743 DALRD3Q5D0E6 543 aaKnown RBP15.83■□□□□ 0.12
SMN2-203ENST00000380743 SLC51AQ86UW1 340 aa15.83■□□□□ 0.12
SMN2-203ENST00000380743 ZNF594Q96JF6 807 aaPredicted RBP15.83■□□□□ 0.12
SMN2-203ENST00000380743 PNMA6EA0A0J9YXQ4 647 aa15.82■□□□□ 0.12
SMN2-203ENST00000380743 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
SMN2-203ENST00000380743 BBOX1O75936 387 aa15.82■□□□□ 0.12
SMN2-203ENST00000380743 RFX5P48382 616 aaPredicted RBP15.82■□□□□ 0.12
SMN2-203ENST00000380743 RPS8P62241 208 aaKnown RBP15.82■□□□□ 0.12
SMN2-203ENST00000380743 CEP85Q6P2H3 762 aa15.82■□□□□ 0.12
SMN2-203ENST00000380743 KLHDC4Q8TBB5 520 aa15.82■□□□□ 0.12
SMN2-203ENST00000380743 CDC5LQ99459 802 aaKnown RBP15.82■□□□□ 0.12
SMN2-203ENST00000380743 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
SMN2-203ENST00000380743 ATP8B2P98198 1209 aa15.81■□□□□ 0.12
SMN2-203ENST00000380743 BCS1LQ9Y276 419 aa15.81■□□□□ 0.12
SMN2-203ENST00000380743 PPEF1O14829 653 aaPredicted RBP15.8■□□□□ 0.12
SMN2-203ENST00000380743 OLFM4Q6UX06 510 aa15.8■□□□□ 0.12
SMN2-203ENST00000380743 ANKRD18AQ8IVF6 992 aa15.8■□□□□ 0.12
SMN2-203ENST00000380743 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
SMN2-203ENST00000380743 C7orf43Q8WVR3 580 aa15.8■□□□□ 0.12
SMN2-203ENST00000380743 ZNF219Q9P2Y4 722 aaPredicted RBP15.8■□□□□ 0.12
SMN2-203ENST00000380743 CACNA1SQ13698 1873 aa15.79■□□□□ 0.12
SMN2-203ENST00000380743 C21orf2O43822 256 aa15.79■□□□□ 0.12
SMN2-203ENST00000380743 PTPN12Q05209 780 aaKnown RBP15.79■□□□□ 0.12
SMN2-203ENST00000380743 PCDHB15Q9Y5E8 787 aa15.79■□□□□ 0.12
SMN2-203ENST00000380743 YBX3P16989 372 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMN2-203ENST00000380743 IGHMBP2P38935 993 aaKnown RBP15.78■□□□□ 0.12
SMN2-203ENST00000380743 POLA2Q14181 598 aa15.78■□□□□ 0.12
SMN2-203ENST00000380743 TAF7LQ5H9L4 462 aa15.78■□□□□ 0.12
SMN2-203ENST00000380743 RPAP2Q8IXW5 612 aaPredicted RBP15.78■□□□□ 0.12
SMN2-203ENST00000380743 SSH3Q8TE77 659 aa15.78■□□□□ 0.12
SMN2-203ENST00000380743 MPHOSPH8Q99549 860 aa15.78■□□□□ 0.12
SMN2-203ENST00000380743 BSDC1Q9NW68 430 aaPredicted RBP15.78■□□□□ 0.12
SMN2-203ENST00000380743 PA2G4Q9UQ80 394 aaKnown RBP15.78■□□□□ 0.12
SMN2-203ENST00000380743 ATP6V0A2Q9Y487 856 aa15.78■□□□□ 0.12
SMN2-203ENST00000380743 LDHAL6AQ6ZMR3 332 aa15.78■□□□□ 0.12
SMN2-203ENST00000380743 SP8Q8IXZ3 490 aa15.78■□□□□ 0.12
SMN2-203ENST00000380743 PELP1Q8IZL8 1130 aaKnown RBP15.78■□□□□ 0.12
SMN2-203ENST00000380743 PUS3Q9BZE2 481 aaKnown RBP15.78■□□□□ 0.12
SMN2-203ENST00000380743 AAMPQ13685 434 aa15.77■□□□□ 0.11
SMN2-203ENST00000380743 TMC4Q7Z404 712 aa15.77■□□□□ 0.11
SMN2-203ENST00000380743 COPRSQ9NQ92 184 aa15.77■□□□□ 0.11
SMN2-203ENST00000380743 LRRC24Q50LG9 513 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms