RNA–Protein interactions for RNA: ENST00000380692.6

MSL3-205, Transcript of MSL complex subunit 3, human

TSL 3

Gene MSL3, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSL3-205	ENST00000380692	CDHR2	Q9BYE9	1310 aa		11.53	□□□□□ -0.56
MSL3-205	ENST00000380692	PXDNL	A1KZ92	1463 aa		11.52	□□□□□ -0.56
MSL3-205	ENST00000380692	PLIN1	O60240	522 aa		11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	MS4A1	P11836	297 aa		11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	CASP7	P55210	303 aa		11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	SF3B3	Q15393	1217 aa	Known RBP	11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	DDX46	Q7L014	1031 aa	Known RBP	11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	USP44	Q9H0E7	712 aa		11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	ABCC4	O15439	1325 aa		11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	CACNA1F	O60840	1977 aa		11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	NRXN2	Q9P2S2	1712 aa		11.52	□□□□□ -0.57
MSL3-205	ENST00000380692	ARFGEF2	Q9Y6D5	1785 aa		11.51	□□□□□ -0.57
MSL3-205	ENST00000380692	HOXA10	P31260	410 aa	Predicted RBP	11.51	□□□□□ -0.57
MSL3-205	ENST00000380692	CCDC152	Q4G0S7	254 aa		11.51	□□□□□ -0.57
MSL3-205	ENST00000380692	TMEM57	Q8N5G2	664 aa		11.51	□□□□□ -0.57
MSL3-205	ENST00000380692	ITPRIP	Q8IWB1	547 aa		11.5	□□□□□ -0.57
MSL3-205	ENST00000380692	TTLL11	Q8NHH1	800 aa		11.5	□□□□□ -0.57
MSL3-205	ENST00000380692	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.5	□□□□□ -0.57
MSL3-205	ENST00000380692	CRAMP1	Q96RY5	1269 aa		11.5	□□□□□ -0.57
MSL3-205	ENST00000380692	PLA2G12B	Q9BX93	195 aa		11.5	□□□□□ -0.57
MSL3-205	ENST00000380692	HDAC5	Q9UQL6	1122 aa		11.5	□□□□□ -0.57
MSL3-205	ENST00000380692	AFDN	P55196	1824 aa	Known RBP	11.5	□□□□□ -0.57
MSL3-205	ENST00000380692	UTY	O14607	1347 aa		11.5	□□□□□ -0.57
MSL3-205	ENST00000380692	RIC1	Q4ADV7	1423 aa		11.5	□□□□□ -0.57
MSL3-205	ENST00000380692	GRIN3B	O60391	1043 aa		11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	BBOX1	O75936	387 aa		11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	UBTFL1	P0CB47	393 aa	Predicted RBP	11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	RLBP1	P12271	317 aa		11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	YBX3	P16989	372 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	CTSW	P56202	376 aa		11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	FOXO4	P98177	505 aa		11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	PRPF40B	Q6NWY9	871 aa	Known RBP	11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	PANK1	Q8TE04	598 aa		11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	SSUH2	Q9Y2M2	353 aa		11.49	□□□□□ -0.57
MSL3-205	ENST00000380692	C21orf2	O43822	256 aa		11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	CSF1R	P07333	972 aa		11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	GNAI3	P08754	354 aa		11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	RPS8	P62241	208 aa	Known RBP	11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	GRAP	Q13588	217 aa		11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	LMBR1L	Q6UX01	489 aa		11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	GRAPL	Q8TC17	118 aa	Predicted RBP	11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	SUCLG2	Q96I99	432 aa		11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	MEIS3	Q99687	375 aa		11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	TMX4	Q9H1E5	349 aa	Predicted RBP	11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	SEC31B	Q9NQW1	1179 aa		11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	CHMP3	Q9Y3E7	222 aa		11.48	□□□□□ -0.57
MSL3-205	ENST00000380692	SRCAP	Q6ZRS2	3230 aa		11.47	□□□□□ -0.57
MSL3-205	ENST00000380692	ANKRD36C	Q5JPF3	1778 aa		11.47	□□□□□ -0.57
MSL3-205	ENST00000380692	PDE3A	Q14432	1141 aa		11.47	□□□□□ -0.57
MSL3-205	ENST00000380692	EPHA10	Q5JZY3	1008 aa		11.47	□□□□□ -0.57
MSL3-205	ENST00000380692	ARHGAP27	Q6ZUM4	889 aa		11.47	□□□□□ -0.57
MSL3-205	ENST00000380692	CELF1	Q92879	486 aa	Known RBP	11.47	□□□□□ -0.57
MSL3-205	ENST00000380692	KAZALD1	Q96I82	304 aa		11.47	□□□□□ -0.57
MSL3-205	ENST00000380692	BICC1	Q9H694	974 aa	Known RBP	11.47	□□□□□ -0.57
MSL3-205	ENST00000380692	GREM2	Q9H772	168 aa		11.47	□□□□□ -0.57
MSL3-205	ENST00000380692	ANKRD18B	A2A2Z9	1011 aa		11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	PPEF1	O14829	653 aa	Predicted RBP	11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	ZBTB7B	O15156	539 aa	Predicted RBP	11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	ITGA6	P23229	1130 aa		11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	IFIT5	Q13325	482 aa	Known RBP	11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	CCDC57	Q2TAC2	916 aa		11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	SOGA3	Q5TF21	947 aa		11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	ANKRD18A	Q8IVF6	992 aa		11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	C7orf43	Q8WVR3	580 aa		11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	CDC5L	Q99459	802 aa	Known RBP	11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	COG6	Q9Y2V7	657 aa		11.46	□□□□□ -0.57
MSL3-205	ENST00000380692	KIF13B	Q9NQT8	1826 aa		11.46	□□□□□ -0.58
MSL3-205	ENST00000380692	GNAI2	P04899	355 aa		11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	RRP1	P56182	461 aa	Known RBP	11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	MVP	Q14764	893 aa	Known RBP	11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	FAM161A	Q3B820	660 aa		11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	RABL6	Q3YEC7	729 aa	Predicted RBP	11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	C20orf194	Q5TEA3	1177 aa		11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	CC2D2B	Q6DHV5	1058 aa		11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	TMC4	Q7Z404	712 aa		11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	SP8	Q8IXZ3	490 aa		11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	ATP6V0A2	Q9Y487	856 aa		11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	LRRFIP2	Q9Y608	721 aa	Known RBP	11.45	□□□□□ -0.58
MSL3-205	ENST00000380692	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	IGHMBP2	P38935	993 aa	Known RBP	11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	CCDC93	Q567U6	631 aa		11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	TAF7L	Q5H9L4	462 aa		11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	OLFM4	Q6UX06	510 aa		11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	RTKN2	Q8IZC4	609 aa		11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	ANKRD44	Q8N8A2	993 aa		11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	MPHOSPH8	Q99549	860 aa		11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	CHMP4B	Q9H444	224 aa	Known RBP	11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	DDX19B	Q9UMR2	479 aa		11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	ANKRD31	Q8N7Z5	1873 aa		11.44	□□□□□ -0.58
MSL3-205	ENST00000380692	RTL9	Q8NET4	1388 aa		11.43	□□□□□ -0.58
MSL3-205	ENST00000380692	GRIPAP1	Q4V328	841 aa		11.43	□□□□□ -0.58
MSL3-205	ENST00000380692	BSDC1	Q9NW68	430 aa	Predicted RBP	11.43	□□□□□ -0.58
MSL3-205	ENST00000380692	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.43	□□□□□ -0.58
MSL3-205	ENST00000380692	LDHAL6A	Q6ZMR3	332 aa		11.42	□□□□□ -0.58
MSL3-205	ENST00000380692	ZNF594	Q96JF6	807 aa	Predicted RBP	11.42	□□□□□ -0.58
MSL3-205	ENST00000380692	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.42	□□□□□ -0.58
MSL3-205	ENST00000380692	KIAA1551	Q9HCM1	1747 aa		11.41	□□□□□ -0.58
MSL3-205	ENST00000380692	DPP8	Q6V1X1	898 aa	Predicted RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms