RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 KCNJ4P48050 445 aa14.48□□□□□ -0.09
USP3-202ENST00000380324 PRPF40BQ6NWY9 871 aaKnown RBP14.48□□□□□ -0.09
USP3-202ENST00000380324 DDX46Q7L014 1031 aaKnown RBP14.48□□□□□ -0.09
USP3-202ENST00000380324 MYH14Q7Z406 1995 aaKnown RBP14.48□□□□□ -0.09
USP3-202ENST00000380324 MCM2P49736 904 aa14.48□□□□□ -0.09
USP3-202ENST00000380324 TAF7LQ5H9L4 462 aa14.48□□□□□ -0.09
USP3-202ENST00000380324 IL17RAQ96F46 866 aa14.48□□□□□ -0.09
USP3-202ENST00000380324 CHGBP05060 677 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 CPA1P15085 419 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 IL6STP40189 918 aaPredicted RBP14.47□□□□□ -0.09
USP3-202ENST00000380324 HSP90AB3PQ58FF7 597 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 ZNF589Q86UQ0 364 aaPredicted RBP14.47□□□□□ -0.09
USP3-202ENST00000380324 PALLDQ8WX93 1383 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 MED23Q9ULK4 1368 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 LOC102724428A0A0B4J2F2 783 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 A0A1B0GUL7 405 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 CASTP20810 708 aaKnown RBP14.47□□□□□ -0.09
USP3-202ENST00000380324 SIK1P57059 783 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 BARGINQ6ZT62 677 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 NGLY1Q96IV0 654 aa14.47□□□□□ -0.09
USP3-202ENST00000380324 GZF1Q9H116 711 aaPredicted RBP14.47□□□□□ -0.09
USP3-202ENST00000380324 TRMT112Q9UI30 125 aaKnown RBP14.47□□□□□ -0.09
USP3-202ENST00000380324 RBM8AQ9Y5S9 174 aaKnown RBP14.47□□□□□ -0.09
USP3-202ENST00000380324 UBN2Q6ZU65 1347 aa14.46□□□□□ -0.09
USP3-202ENST00000380324 KCNQ2O43526 872 aa14.46□□□□□ -0.09
USP3-202ENST00000380324 CRKLP46109 303 aaKnown RBP14.46□□□□□ -0.09
USP3-202ENST00000380324 IFIT5Q13325 482 aaKnown RBP14.46□□□□□ -0.09
USP3-202ENST00000380324 HAUS7Q99871 368 aa14.46□□□□□ -0.09
USP3-202ENST00000380324 CIAO1O76071 339 aa14.46□□□□□ -0.1
USP3-202ENST00000380324 JAKMIP1Q96N16 626 aaKnown RBP14.46□□□□□ -0.1
USP3-202ENST00000380324 LARP6Q9BRS8 491 aaKnown RBP14.46□□□□□ -0.1
USP3-202ENST00000380324 CWC22Q9HCG8 908 aaKnown RBP14.46□□□□□ -0.1
USP3-202ENST00000380324 CCDC87Q9NVE4 849 aa14.46□□□□□ -0.1
USP3-202ENST00000380324 GOLIM4O00461 696 aa14.45□□□□□ -0.1
USP3-202ENST00000380324 TRAK2O60296 914 aa14.45□□□□□ -0.1
USP3-202ENST00000380324 ITPK1Q13572 414 aa14.45□□□□□ -0.1
USP3-202ENST00000380324 ADCK5Q3MIX3 580 aa14.45□□□□□ -0.1
USP3-202ENST00000380324 PLA2G12BQ9BX93 195 aa14.45□□□□□ -0.1
USP3-202ENST00000380324 GREM2Q9H772 168 aa14.45□□□□□ -0.1
USP3-202ENST00000380324 FAM177BA6PVY3 158 aa14.44□□□□□ -0.1
USP3-202ENST00000380324 IRS4O14654 1257 aaPredicted RBP14.44□□□□□ -0.1
USP3-202ENST00000380324 CTSWP56202 376 aa14.44□□□□□ -0.1
USP3-202ENST00000380324 NUCB2P80303 420 aa14.44□□□□□ -0.1
USP3-202ENST00000380324 INTS5Q6P9B9 1019 aaKnown RBP14.44□□□□□ -0.1
USP3-202ENST00000380324 CEP126Q9P2H0 1117 aa14.44□□□□□ -0.1
USP3-202ENST00000380324 CDHR2Q9BYE9 1310 aa14.44□□□□□ -0.1
USP3-202ENST00000380324 ITGA6P23229 1130 aa14.44□□□□□ -0.1
USP3-202ENST00000380324 AK2P54819 239 aa14.44□□□□□ -0.1
USP3-202ENST00000380324 GPR108Q9NPR9 543 aa14.44□□□□□ -0.1
USP3-202ENST00000380324 RIC1Q4ADV7 1423 aa14.44□□□□□ -0.1
USP3-202ENST00000380324 BCL9LQ86UU0 1499 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 ZKSCAN1P17029 563 aaPredicted RBP14.43□□□□□ -0.1
USP3-202ENST00000380324 EIF5P55010 431 aaKnown RBP14.43□□□□□ -0.1
USP3-202ENST00000380324 NECTIN1Q15223 517 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 FOXD4L5Q5VV16 416 aaPredicted RBP14.43□□□□□ -0.1
USP3-202ENST00000380324 CREB3L3Q68CJ9 461 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 CCDC129Q6ZRS4 1044 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 FOXD4L4Q8WXT5 416 aaPredicted RBP14.43□□□□□ -0.1
USP3-202ENST00000380324 MAP4K1Q92918 833 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 TTC14Q96N46 770 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 SEC62Q99442 399 aaKnown RBP14.43□□□□□ -0.1
USP3-202ENST00000380324 PAG1Q9NWQ8 432 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 ERVV-1B6SEH8 477 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 CYP2E1P05181 493 aaPredicted RBP14.43□□□□□ -0.1
USP3-202ENST00000380324 CSF1RP07333 972 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 ADORA1P30542 326 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 CUL4AQ13619 759 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 TTLL11Q8NHH1 800 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 RREB1Q92766 1687 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 JCADQ9P266 1359 aa14.43□□□□□ -0.1
USP3-202ENST00000380324 COL5A3P25940 1745 aaPredicted RBP14.43□□□□□ -0.1
USP3-202ENST00000380324 BAG4O95429 457 aaKnown RBP14.42□□□□□ -0.1
USP3-202ENST00000380324 SLFNL1Q499Z3 407 aa14.42□□□□□ -0.1
USP3-202ENST00000380324 GORABQ5T7V8 394 aa14.42□□□□□ -0.1
USP3-202ENST00000380324 KBTBD3Q8NAB2 608 aa14.42□□□□□ -0.1
USP3-202ENST00000380324 SNRKQ9NRH2 765 aa14.42□□□□□ -0.1
USP3-202ENST00000380324 RFX7Q2KHR2 1363 aa14.42□□□□□ -0.1
USP3-202ENST00000380324 SLC27A2O14975 620 aa14.42□□□□□ -0.1
USP3-202ENST00000380324 IFIT1P09914 478 aaKnown RBP14.42□□□□□ -0.1
USP3-202ENST00000380324 CICQ96RK0 1608 aaPredicted RBP14.41□□□□□ -0.1
USP3-202ENST00000380324 KCNQ4P56696 695 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 METTL24Q5JXM2 366 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 LDHAL6AQ6ZMR3 332 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 RUFY3Q7L099 469 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 TAF6LQ9Y6J9 622 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 ANKRD18BA2A2Z9 1011 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 GOLGA6L22H0YM25 854 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 TAF5LO75529 589 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 COL9A3Q14050 684 aaPredicted RBP14.41□□□□□ -0.1
USP3-202ENST00000380324 ZNF34Q8IZ26 560 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 XAGE2Q96GT9 111 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 CNNM1Q9NRU3 951 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 ZDHHC9Q9Y397 364 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 CYP46A1Q9Y6A2 500 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 SPEF2Q9C093 1822 aa14.41□□□□□ -0.1
USP3-202ENST00000380324 EP400Q96L91 3159 aa14.4□□□□□ -0.1
USP3-202ENST00000380324 FKBP4Q02790 459 aaKnown RBP eCLIP14.4□□□□□ -0.1
USP3-202ENST00000380324 VPS72Q15906 364 aa14.4□□□□□ -0.1
USP3-202ENST00000380324 TTC39AQ5SRH9 613 aa14.4□□□□□ -0.1
USP3-202ENST00000380324 RNF20Q5VTR2 975 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms