RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 TPM2P07951 284 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 ATP5JP18859 108 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 STK3Q13188 491 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 CCDC129Q6ZRS4 1044 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 DCAF5Q96JK2 942 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
RFC3-201ENST00000380071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.49□□□□□ -0.091e-7■■□□□ 13.3
RFC3-201ENST00000380071 R3HCC1Q9Y3T6 440 aaKnown RBP14.49□□□□□ -0.09
RFC3-201ENST00000380071 UVSSAQ2YD98 709 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 FAM184AQ8NB25 1140 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 FMNL2Q96PY5 1086 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 DBNDD2Q9BQY9 259 aa14.49□□□□□ -0.09
RFC3-201ENST00000380071 CCDC9Q9Y3X0 531 aaKnown RBP14.49□□□□□ -0.09
RFC3-201ENST00000380071 ADAMTSL3P82987 1691 aa14.48□□□□□ -0.09
RFC3-201ENST00000380071 MRC1P22897 1456 aa14.48□□□□□ -0.09
RFC3-201ENST00000380071 MCM5P33992 734 aa14.48□□□□□ -0.09
RFC3-201ENST00000380071 MST1RQ04912 1400 aa14.48□□□□□ -0.09
RFC3-201ENST00000380071 RABL6Q3YEC7 729 aaPredicted RBP14.48□□□□□ -0.09
RFC3-201ENST00000380071 DNAJC2Q99543 621 aaKnown RBP14.48□□□□□ -0.09
RFC3-201ENST00000380071 FUCA2Q9BTY2 467 aa14.48□□□□□ -0.09
RFC3-201ENST00000380071 ATF3P18847 181 aa14.47□□□□□ -0.09
RFC3-201ENST00000380071 TTC6Q86TZ1 520 aa14.47□□□□□ -0.09
RFC3-201ENST00000380071 ZNF830Q96NB3 372 aaPredicted RBP14.47□□□□□ -0.09
RFC3-201ENST00000380071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■■■□□ 14.7
RFC3-201ENST00000380071 CASP7P55210 303 aa14.47□□□□□ -0.09
RFC3-201ENST00000380071 CABP4P57796 275 aa14.47□□□□□ -0.09
RFC3-201ENST00000380071 CSPP1Q1MSJ5 1256 aa14.47□□□□□ -0.09
RFC3-201ENST00000380071 TSGA10IPQ3SY00 556 aa14.47□□□□□ -0.09
RFC3-201ENST00000380071 CHMP3Q9Y3E7 222 aa14.47□□□□□ -0.09
RFC3-201ENST00000380071 KIF1AQ12756 1690 aa14.47□□□□□ -0.09
RFC3-201ENST00000380071 JCADQ9P266 1359 aa14.47□□□□□ -0.09
RFC3-201ENST00000380071 ADCY5O95622 1261 aa14.46□□□□□ -0.09
RFC3-201ENST00000380071 ANKRD1Q15327 319 aa14.46□□□□□ -0.09
RFC3-201ENST00000380071 USPL1Q5W0Q7 1092 aa14.46□□□□□ -0.09
RFC3-201ENST00000380071 ALDH8A1Q9H2A2 487 aaPredicted RBP14.46□□□□□ -0.09
RFC3-201ENST00000380071 SLFNL1Q499Z3 407 aa14.46□□□□□ -0.09
RFC3-201ENST00000380071 LMBR1LQ6UX01 489 aa14.46□□□□□ -0.09
RFC3-201ENST00000380071 HMG20BQ9P0W2 317 aa14.46□□□□□ -0.09
RFC3-201ENST00000380071 COL18A1P39060 1754 aa14.46□□□□□ -0.1
RFC3-201ENST00000380071 DDX46Q7L014 1031 aaKnown RBP14.45□□□□□ -0.1
RFC3-201ENST00000380071 ZNF609O15014 1411 aa14.45□□□□□ -0.1
RFC3-201ENST00000380071 KRT85P78386 507 aa14.45□□□□□ -0.1
RFC3-201ENST00000380071 PLBD2Q8NHP8 589 aa14.45□□□□□ -0.1
RFC3-201ENST00000380071 TFIP11Q9UBB9 837 aaKnown RBP14.45□□□□□ -0.1
RFC3-201ENST00000380071 AFDNP55196 1824 aaKnown RBP14.45□□□□□ -0.1
RFC3-201ENST00000380071 NBPF26B4DH59 902 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 KDM4AO75164 1064 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 NBPF14Q5TI25 921 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 NBPF10Q6P3W6 841 aaKnown RBP14.44□□□□□ -0.1
RFC3-201ENST00000380071 NBPF15Q8N660 670 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 NEK1Q96PY6 1258 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 HAUS7Q99871 368 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 AP5Z1O43299 807 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 JAK2O60674 1132 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 CYP21A2P08686 494 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 LIG1P18858 919 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 FOXO4P98177 505 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 PLCB2Q00722 1185 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 TMEM94Q12767 1356 aa14.44□□□□□ -0.1
RFC3-201ENST00000380071 PDCP20941 246 aa14.43□□□□□ -0.1
RFC3-201ENST00000380071 TIMM10P62072 90 aa14.43□□□□□ -0.1
RFC3-201ENST00000380071 MCMDC2Q4G0Z9 681 aa14.43□□□□□ -0.1
RFC3-201ENST00000380071 TTLL7Q6ZT98 887 aa14.43□□□□□ -0.1
RFC3-201ENST00000380071 Q6ZUG5 572 aa14.43□□□□□ -0.1
RFC3-201ENST00000380071 LRRC2Q9BYS8 371 aa14.43□□□□□ -0.1
RFC3-201ENST00000380071 CAMK4Q16566 473 aa14.43□□□□□ -0.1
RFC3-201ENST00000380071 NEUROD6Q96NK8 337 aa14.43□□□□□ -0.1
RFC3-201ENST00000380071 TTC12Q9H892 705 aaPredicted RBP14.43□□□□□ -0.1
RFC3-201ENST00000380071 ARFGEF2Q9Y6D5 1785 aa14.42□□□□□ -0.1
RFC3-201ENST00000380071 H7C1W4 665 aa14.42□□□□□ -0.1
RFC3-201ENST00000380071 ATG9AQ7Z3C6 839 aa14.42□□□□□ -0.1
RFC3-201ENST00000380071 A1BGP04217 495 aa14.42□□□□□ -0.1
RFC3-201ENST00000380071 TERF1P54274 439 aa14.42□□□□□ -0.1
RFC3-201ENST00000380071 KRT32Q14532 448 aa14.42□□□□□ -0.1
RFC3-201ENST00000380071 DDX11Q96FC9 970 aa14.42□□□□□ -0.1
RFC3-201ENST00000380071 KIAA2012Q0VF49 1180 aa14.41□□□□□ -0.1
RFC3-201ENST00000380071 STOX1Q6ZVD7 989 aa14.41□□□□□ -0.1
RFC3-201ENST00000380071 GTF3C6Q969F1 213 aa14.41□□□□□ -0.1
RFC3-201ENST00000380071 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
RFC3-201ENST00000380071 GOLIM4O00461 696 aa14.41□□□□□ -0.1
RFC3-201ENST00000380071 PDIA4P13667 645 aaKnown RBP14.41□□□□□ -0.1
RFC3-201ENST00000380071 KBTBD3Q8NAB2 608 aa14.41□□□□□ -0.1
RFC3-201ENST00000380071 ZNF594Q96JF6 807 aaPredicted RBP14.41□□□□□ -0.1
RFC3-201ENST00000380071 ELP1O95163 1332 aa14.4□□□□□ -0.1
RFC3-201ENST00000380071 HSP90B1P14625 803 aaKnown RBP14.4□□□□□ -0.1
RFC3-201ENST00000380071 SPATA32Q96LK8 384 aa14.4□□□□□ -0.1
RFC3-201ENST00000380071 A0A0G2JLW4 131 aa14.4□□□□□ -0.1
RFC3-201ENST00000380071 CCDC192P0DO97 292 aa14.4□□□□□ -0.1
RFC3-201ENST00000380071 RBM10P98175 930 aaKnown RBP14.4□□□□□ -0.1
RFC3-201ENST00000380071 LRRC24Q50LG9 513 aa14.4□□□□□ -0.1
RFC3-201ENST00000380071 C17orf53Q8N3J3 647 aaPredicted RBP14.4□□□□□ -0.1
RFC3-201ENST00000380071 LEO1Q8WVC0 666 aaPredicted RBP14.4□□□□□ -0.1
RFC3-201ENST00000380071 BRF1Q92994 677 aa14.4□□□□□ -0.1
RFC3-201ENST00000380071 DACT1Q9NYF0 836 aa14.4□□□□□ -0.1
RFC3-201ENST00000380071 GLI3P10071 1580 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 SCRN1Q12765 414 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 GLIPR1L2Q4G1C9 344 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 CKAP2LQ8IYA6 745 aa14.39□□□□□ -0.11
RFC3-201ENST00000380071 SCAND2PQ9GZW5 306 aaPredicted RBP14.39□□□□□ -0.11
RFC3-201ENST00000380071 NUP62CLQ9H1M0 184 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms